RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.49■□□□□ 0.23
HDAC3-203ENST00000467533 AFF2P51816 1311 aa16.48■□□□□ 0.23
HDAC3-203ENST00000467533 NUTM2BA6NNL0 878 aaPredicted RBP16.48■□□□□ 0.23
HDAC3-203ENST00000467533 NUTM2EB1AL46 878 aaPredicted RBP16.48■□□□□ 0.23
HDAC3-203ENST00000467533 NUTM2AQ8IVF1 878 aaPredicted RBP16.48■□□□□ 0.23
HDAC3-203ENST00000467533 C14orf37Q86TY3 774 aa16.47■□□□□ 0.23
HDAC3-203ENST00000467533 SRCAPQ6ZRS2 3230 aa16.46■□□□□ 0.23
HDAC3-203ENST00000467533 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
HDAC3-203ENST00000467533 IDI1Q13907 227 aa16.45■□□□□ 0.22
HDAC3-203ENST00000467533 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
HDAC3-203ENST00000467533 CROCC2H7BZ55 1655 aa16.45■□□□□ 0.22
HDAC3-203ENST00000467533 KANK1Q14678 1352 aa16.44■□□□□ 0.22
HDAC3-203ENST00000467533 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
HDAC3-203ENST00000467533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.22
HDAC3-203ENST00000467533 MYO5BQ9ULV0 1848 aa16.44■□□□□ 0.22
HDAC3-203ENST00000467533 NCOA3Q9Y6Q9 1424 aa16.43■□□□□ 0.22
HDAC3-203ENST00000467533 CADPS2Q86UW7 1296 aa16.42■□□□□ 0.22
HDAC3-203ENST00000467533 GCC2Q8IWJ2 1684 aa16.42■□□□□ 0.22
HDAC3-203ENST00000467533 SETBP1Q9Y6X0 1596 aa16.42■□□□□ 0.22
HDAC3-203ENST00000467533 LMTK2Q8IWU2 1503 aa16.41■□□□□ 0.22
HDAC3-203ENST00000467533 FOXD1Q16676 465 aa16.41■□□□□ 0.22
HDAC3-203ENST00000467533 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
HDAC3-203ENST00000467533 PLEKHG1Q9ULL1 1385 aa16.4■□□□□ 0.22
HDAC3-203ENST00000467533 ATF3P18847 181 aa16.4■□□□□ 0.22
HDAC3-203ENST00000467533 RBM6P78332 1123 aaKnown RBP16.4■□□□□ 0.22
HDAC3-203ENST00000467533 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
HDAC3-203ENST00000467533 NHSL1Q5SYE7 1610 aa16.4■□□□□ 0.22
HDAC3-203ENST00000467533 PPP1R15AO75807 674 aaPredicted RBP16.39■□□□□ 0.21
HDAC3-203ENST00000467533 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
HDAC3-203ENST00000467533 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
HDAC3-203ENST00000467533 ZFYVE9O95405 1425 aa16.38■□□□□ 0.21
HDAC3-203ENST00000467533 NOS1P29475 1434 aa16.38■□□□□ 0.21
HDAC3-203ENST00000467533 MYOM3Q5VTT5 1437 aa16.38■□□□□ 0.21
HDAC3-203ENST00000467533 QTRT2Q9H974 415 aaKnown RBP16.38■□□□□ 0.21
HDAC3-203ENST00000467533 BRINP3Q76B58 766 aa16.37■□□□□ 0.21
HDAC3-203ENST00000467533 RIMS2Q9UQ26 1411 aa16.36■□□□□ 0.21
HDAC3-203ENST00000467533 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
HDAC3-203ENST00000467533 C19orf44Q9H6X5 657 aa16.35■□□□□ 0.21
HDAC3-203ENST00000467533 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
HDAC3-203ENST00000467533 NGLY1Q96IV0 654 aa16.33■□□□□ 0.2
HDAC3-203ENST00000467533 SLC52A1Q9NWF4 448 aa16.33■□□□□ 0.2
HDAC3-203ENST00000467533 TMEM131LA2VDJ0 1609 aa16.33■□□□□ 0.2
HDAC3-203ENST00000467533 TRPM2O94759 1503 aa16.31■□□□□ 0.2
HDAC3-203ENST00000467533 DCCP43146 1447 aa16.31■□□□□ 0.2
HDAC3-203ENST00000467533 HDGFP51858 240 aaKnown RBP16.31■□□□□ 0.2
HDAC3-203ENST00000467533 TBX22Q9Y458 520 aa16.31■□□□□ 0.2
HDAC3-203ENST00000467533 PNPLA6Q8IY17 1366 aa16.3■□□□□ 0.2
HDAC3-203ENST00000467533 ABCC5O15440 1437 aa16.29■□□□□ 0.2
HDAC3-203ENST00000467533 ADAMTS13Q76LX8 1427 aa16.29■□□□□ 0.2
HDAC3-203ENST00000467533 LRRC59Q96AG4 307 aaKnown RBP16.29■□□□□ 0.2
HDAC3-203ENST00000467533 PIK3R4Q99570 1358 aa16.28■□□□□ 0.2
HDAC3-203ENST00000467533 RPRD2Q5VT52 1461 aaKnown RBP16.28■□□□□ 0.2
HDAC3-203ENST00000467533 MST1RQ04912 1400 aa16.28■□□□□ 0.2
HDAC3-203ENST00000467533 PTPN23Q9H3S7 1636 aa16.27■□□□□ 0.2
HDAC3-203ENST00000467533 ADAMTS2O95450 1211 aa16.27■□□□□ 0.2
HDAC3-203ENST00000467533 DAPK1P53355 1430 aa16.26■□□□□ 0.19
HDAC3-203ENST00000467533 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
HDAC3-203ENST00000467533 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.25■□□□□ 0.19
HDAC3-203ENST00000467533 LRP5O75197 1615 aa16.25■□□□□ 0.19
HDAC3-203ENST00000467533 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
HDAC3-203ENST00000467533 USP21Q9UK80 565 aa16.24■□□□□ 0.19
HDAC3-203ENST00000467533 UNC13BO14795 1591 aa16.24■□□□□ 0.19
HDAC3-203ENST00000467533 PTPRUQ92729 1446 aa16.23■□□□□ 0.19
HDAC3-203ENST00000467533 DDX17Q92841 729 aaKnown RBP16.23■□□□□ 0.19
HDAC3-203ENST00000467533 TRPC5Q9UL62 973 aaPredicted RBP16.23■□□□□ 0.19
HDAC3-203ENST00000467533 AMOTL2Q9Y2J4 779 aa16.23■□□□□ 0.19
HDAC3-203ENST00000467533 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
HDAC3-203ENST00000467533 EP400Q96L91 3159 aa16.22■□□□□ 0.19
HDAC3-203ENST00000467533 NALCNQ8IZF0 1738 aa16.22■□□□□ 0.19
HDAC3-203ENST00000467533 ATRNO75882 1429 aa16.21■□□□□ 0.19
HDAC3-203ENST00000467533 CCDC125Q86Z20 511 aa16.21■□□□□ 0.19
HDAC3-203ENST00000467533 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
HDAC3-203ENST00000467533 KANK4Q5T7N3 995 aaPredicted RBP16.18■□□□□ 0.18
HDAC3-203ENST00000467533 LAMC1P11047 1609 aa16.18■□□□□ 0.18
HDAC3-203ENST00000467533 PTCH1Q13635 1447 aa16.18■□□□□ 0.18
HDAC3-203ENST00000467533 VPS8Q8N3P4 1428 aa16.18■□□□□ 0.18
HDAC3-203ENST00000467533 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
HDAC3-203ENST00000467533 ADGRL3Q9HAR2 1447 aa16.17■□□□□ 0.18
HDAC3-203ENST00000467533 MARF1Q9Y4F3 1742 aaKnown RBP16.16■□□□□ 0.18
HDAC3-203ENST00000467533 COL22A1Q8NFW1 1626 aaPredicted RBP16.16■□□□□ 0.18
HDAC3-203ENST00000467533 E9PCH4 1651 aa16.15■□□□□ 0.18
HDAC3-203ENST00000467533 BLMP54132 1417 aaPredicted RBP16.15■□□□□ 0.18
HDAC3-203ENST00000467533 FNBP4Q8N3X1 1017 aaPredicted RBP16.14■□□□□ 0.17
HDAC3-203ENST00000467533 ADGRL2O95490 1459 aa16.12■□□□□ 0.17
HDAC3-203ENST00000467533 C1orf167Q5SNV9 1468 aa16.12■□□□□ 0.17
HDAC3-203ENST00000467533 IQGAP3Q86VI3 1631 aa16.12■□□□□ 0.17
HDAC3-203ENST00000467533 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.11■□□□□ 0.17
HDAC3-203ENST00000467533 BRWD3Q6RI45 1802 aa16.1■□□□□ 0.17
HDAC3-203ENST00000467533 SPHKAPQ2M3C7 1700 aa16.1■□□□□ 0.17
HDAC3-203ENST00000467533 ANKRD50Q9ULJ7 1429 aa16.1■□□□□ 0.17
HDAC3-203ENST00000467533 SF3B2Q13435 895 aaKnown RBP16.09■□□□□ 0.17
HDAC3-203ENST00000467533 DEFB132Q7Z7B7 95 aa16.09■□□□□ 0.17
HDAC3-203ENST00000467533 BCL9LQ86UU0 1499 aa16.09■□□□□ 0.17
HDAC3-203ENST00000467533 SOS2Q07890 1332 aaPredicted RBP16.08■□□□□ 0.16
HDAC3-203ENST00000467533 MYOM2P54296 1465 aa16.08■□□□□ 0.16
HDAC3-203ENST00000467533 GJD4Q96KN9 370 aaPredicted RBP16.07■□□□□ 0.16
HDAC3-203ENST00000467533 METP08581 1390 aa16.07■□□□□ 0.16
HDAC3-203ENST00000467533 GLI3P10071 1580 aa16.07■□□□□ 0.16
HDAC3-203ENST00000467533 RALGAPBQ86X10 1494 aa16.04■□□□□ 0.16
HDAC3-203ENST00000467533 PSDA5PKW4 1024 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms