RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 ZMYM3Q14202 1370 aa13.23□□□□□ -0.29
PRPF3-202ENST00000467329 PIK3C2GO75747 1445 aa13.23□□□□□ -0.29
PRPF3-202ENST00000467329 HIRIP3Q9BW71 556 aaPredicted RBP13.23□□□□□ -0.29
PRPF3-202ENST00000467329 WASHC2AQ641Q2 1341 aa13.22□□□□□ -0.29
PRPF3-202ENST00000467329 IDI1Q13907 227 aa13.22□□□□□ -0.29
PRPF3-202ENST00000467329 SCAF11Q99590 1463 aaKnown RBP13.22□□□□□ -0.29
PRPF3-202ENST00000467329 AEBP2Q6ZN18 517 aaPredicted RBP13.22□□□□□ -0.29
PRPF3-202ENST00000467329 FER1L4A9Z1Z3 1794 aa13.21□□□□□ -0.29
PRPF3-202ENST00000467329 MLECQ14165 292 aa13.21□□□□□ -0.29
PRPF3-202ENST00000467329 NBPF1Q3BBV0 1214 aa13.2□□□□□ -0.3
PRPF3-202ENST00000467329 MYO5BQ9ULV0 1848 aa13.2□□□□□ -0.3
PRPF3-202ENST00000467329 ADGRF5Q8IZF2 1346 aa13.2□□□□□ -0.3
PRPF3-202ENST00000467329 FBXO31Q5XUX0 539 aaPredicted RBP13.2□□□□□ -0.3
PRPF3-202ENST00000467329 TNRQ92752 1358 aa13.19□□□□□ -0.3
PRPF3-202ENST00000467329 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
PRPF3-202ENST00000467329 CHGAP10645 457 aaKnown RBP13.19□□□□□ -0.3
PRPF3-202ENST00000467329 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
PRPF3-202ENST00000467329 A2ML1A8K2U0 1454 aa13.19□□□□□ -0.3
PRPF3-202ENST00000467329 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
PRPF3-202ENST00000467329 KIF7Q2M1P5 1343 aa13.18□□□□□ -0.3
PRPF3-202ENST00000467329 NLRP1Q9C000 1473 aa13.18□□□□□ -0.3
PRPF3-202ENST00000467329 MYO3AQ8NEV4 1616 aa13.18□□□□□ -0.3
PRPF3-202ENST00000467329 MIER1Q8N108 512 aa13.18□□□□□ -0.3
PRPF3-202ENST00000467329 C3P01024 1663 aa13.17□□□□□ -0.3
PRPF3-202ENST00000467329 ADGRB1O14514 1584 aa13.17□□□□□ -0.3
PRPF3-202ENST00000467329 C14orf93Q9H972 538 aaKnown RBP13.17□□□□□ -0.3
PRPF3-202ENST00000467329 ST20-MTHFSA0A0A6YYL1 179 aa13.16□□□□□ -0.3
PRPF3-202ENST00000467329 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
PRPF3-202ENST00000467329 SLC24A1O60721 1099 aa13.15□□□□□ -0.3
PRPF3-202ENST00000467329 ADAMTSL3P82987 1691 aa13.14□□□□□ -0.31
PRPF3-202ENST00000467329 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
PRPF3-202ENST00000467329 CFAP70Q5T0N1 1121 aa13.13□□□□□ -0.31
PRPF3-202ENST00000467329 TESK2Q96S53 571 aa13.13□□□□□ -0.31
PRPF3-202ENST00000467329 RIMS2Q9UQ26 1411 aa13.13□□□□□ -0.31
PRPF3-202ENST00000467329 SBNO2Q9Y2G9 1366 aa13.13□□□□□ -0.31
PRPF3-202ENST00000467329 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRPF3-202ENST00000467329 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
PRPF3-202ENST00000467329 ANP32CO43423 234 aa13.1□□□□□ -0.31
PRPF3-202ENST00000467329 TMF1P82094 1093 aa13.1□□□□□ -0.31
PRPF3-202ENST00000467329 ASXL1Q8IXJ9 1541 aa13.09□□□□□ -0.31
PRPF3-202ENST00000467329 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
PRPF3-202ENST00000467329 ALKQ9UM73 1620 aa13.09□□□□□ -0.31
PRPF3-202ENST00000467329 HDGFP51858 240 aaKnown RBP13.09□□□□□ -0.31
PRPF3-202ENST00000467329 CDCA8Q53HL2 280 aa13.09□□□□□ -0.31
PRPF3-202ENST00000467329 SETD1AO15047 1707 aaKnown RBP13.08□□□□□ -0.31
PRPF3-202ENST00000467329 CCER2I3L3R5 266 aa13.08□□□□□ -0.32
PRPF3-202ENST00000467329 ARHGEF28Q8N1W1 1705 aaKnown RBP13.08□□□□□ -0.32
PRPF3-202ENST00000467329 DISP3Q9P2K9 1392 aa13.08□□□□□ -0.32
PRPF3-202ENST00000467329 SLIT1O75093 1534 aa13.07□□□□□ -0.32
PRPF3-202ENST00000467329 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
PRPF3-202ENST00000467329 ARHGAP23Q9P227 1491 aa13.07□□□□□ -0.32
PRPF3-202ENST00000467329 QRICH2Q9H0J4 1663 aa13.06□□□□□ -0.32
PRPF3-202ENST00000467329 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
PRPF3-202ENST00000467329 DLC1Q96QB1 1528 aa13.06□□□□□ -0.32
PRPF3-202ENST00000467329 ZNF142P52746 1687 aaPredicted RBP13.05□□□□□ -0.32
PRPF3-202ENST00000467329 CENPJQ9HC77 1338 aaPredicted RBP13.05□□□□□ -0.32
PRPF3-202ENST00000467329 PTPRMP28827 1452 aa13.03□□□□□ -0.32
PRPF3-202ENST00000467329 YTHDC2Q9H6S0 1430 aaKnown RBP13.03□□□□□ -0.32
PRPF3-202ENST00000467329 KNDC1Q76NI1 1749 aa13.03□□□□□ -0.32
PRPF3-202ENST00000467329 CEP170BQ9Y4F5 1589 aaPredicted RBP13.03□□□□□ -0.32
PRPF3-202ENST00000467329 KTN1Q86UP2 1357 aaKnown RBP13.03□□□□□ -0.32
PRPF3-202ENST00000467329 PUS7Q96PZ0 661 aaKnown RBP13.02□□□□□ -0.32
PRPF3-202ENST00000467329 PLEKHG1Q9ULL1 1385 aa13.02□□□□□ -0.32
PRPF3-202ENST00000467329 CEBPAP49715 358 aaPredicted RBP13.02□□□□□ -0.33
PRPF3-202ENST00000467329 LRPPRCP42704 1394 aaKnown RBP13.02□□□□□ -0.33
PRPF3-202ENST00000467329 MYOM1P52179 1685 aa13.01□□□□□ -0.33
PRPF3-202ENST00000467329 NUTM2DQ5VT03 806 aaPredicted RBP13.01□□□□□ -0.33
PRPF3-202ENST00000467329 DIP2AQ14689 1571 aa13.01□□□□□ -0.33
PRPF3-202ENST00000467329 TMEM132EQ6IEE7 984 aa13□□□□□ -0.33
PRPF3-202ENST00000467329 TECPR2O15040 1411 aa12.99□□□□□ -0.33
PRPF3-202ENST00000467329 ABCC11Q96J66 1382 aa12.99□□□□□ -0.33
PRPF3-202ENST00000467329 POLR3GLQ9BT43 218 aa12.99□□□□□ -0.33
PRPF3-202ENST00000467329 THEMISQ8N1K5 641 aaPredicted RBP12.99□□□□□ -0.33
PRPF3-202ENST00000467329 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
PRPF3-202ENST00000467329 TRAK1Q9UPV9 953 aa12.99□□□□□ -0.33
PRPF3-202ENST00000467329 MED14O60244 1454 aa12.99□□□□□ -0.33
PRPF3-202ENST00000467329 CPS1P31327 1500 aa12.98□□□□□ -0.33
PRPF3-202ENST00000467329 SIRT1Q96EB6 747 aa12.98□□□□□ -0.33
PRPF3-202ENST00000467329 ADAMTS13Q76LX8 1427 aa12.97□□□□□ -0.33
PRPF3-202ENST00000467329 TULP4Q9NRJ4 1543 aa12.97□□□□□ -0.33
PRPF3-202ENST00000467329 EID1Q9Y6B2 187 aa12.97□□□□□ -0.33
PRPF3-202ENST00000467329 SETD1BQ9UPS6 1966 aaKnown RBP12.97□□□□□ -0.33
PRPF3-202ENST00000467329 FAM135BQ49AJ0 1406 aa12.96□□□□□ -0.33
PRPF3-202ENST00000467329 EVC2Q86UK5 1308 aa12.95□□□□□ -0.34
PRPF3-202ENST00000467329 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
PRPF3-202ENST00000467329 RALBP1Q15311 655 aa12.94□□□□□ -0.34
PRPF3-202ENST00000467329 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
PRPF3-202ENST00000467329 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
PRPF3-202ENST00000467329 CENPBP07199 599 aaPredicted RBP12.93□□□□□ -0.34
PRPF3-202ENST00000467329 TXNDC2Q86VQ3 553 aa12.93□□□□□ -0.34
PRPF3-202ENST00000467329 METP08581 1390 aa12.93□□□□□ -0.34
PRPF3-202ENST00000467329 LTKP29376 864 aa12.93□□□□□ -0.34
PRPF3-202ENST00000467329 PANK3Q9H999 370 aa12.93□□□□□ -0.34
PRPF3-202ENST00000467329 PARD3Q8TEW0 1356 aa12.92□□□□□ -0.34
PRPF3-202ENST00000467329 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
PRPF3-202ENST00000467329 USP32Q8NFA0 1604 aa12.92□□□□□ -0.34
PRPF3-202ENST00000467329 PIK3R4Q99570 1358 aa12.91□□□□□ -0.34
PRPF3-202ENST00000467329 PRAM1Q96QH2 718 aa12.91□□□□□ -0.34
PRPF3-202ENST00000467329 STK26Q9P289 416 aa12.91□□□□□ -0.34
PRPF3-202ENST00000467329 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms