RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
SMC4-207ENST00000467263 TLL1O43897 1013 aa11.18□□□□□ -0.62
SMC4-207ENST00000467263 FCHSD2O94868 740 aa11.17□□□□□ -0.62
SMC4-207ENST00000467263 SLC10A3P09131 477 aa11.17□□□□□ -0.62
SMC4-207ENST00000467263 FECHP22830 423 aa11.17□□□□□ -0.62
SMC4-207ENST00000467263 PLCB2Q00722 1185 aa11.17□□□□□ -0.62
SMC4-207ENST00000467263 NECTIN2Q92692 538 aa11.16□□□□□ -0.62
SMC4-207ENST00000467263 TESPA1A2RU30 521 aaPredicted RBP11.15□□□□□ -0.62
SMC4-207ENST00000467263 EMID1Q96A84 441 aaPredicted RBP11.15□□□□□ -0.62
SMC4-207ENST00000467263 PXYLP1Q8TE99 480 aa11.14□□□□□ -0.63
SMC4-207ENST00000467263 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
SMC4-207ENST00000467263 CFHP08603 1231 aa11.13□□□□□ -0.63
SMC4-207ENST00000467263 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
SMC4-207ENST00000467263 GPR37O15354 613 aa11.12□□□□□ -0.63
SMC4-207ENST00000467263 RNF223E7ERA6 249 aa11.11□□□□□ -0.63
SMC4-207ENST00000467263 ACTN4O43707 911 aaKnown RBP11.11□□□□□ -0.63
SMC4-207ENST00000467263 NLRP7Q8WX94 980 aa11.11□□□□□ -0.63
SMC4-207ENST00000467263 PPEF1O14829 653 aaPredicted RBP11.1□□□□□ -0.63
SMC4-207ENST00000467263 METTL3Q86U44 580 aaKnown RBP11.1□□□□□ -0.63
SMC4-207ENST00000467263 PRR14Q9BWN1 585 aa11.1□□□□□ -0.63
SMC4-207ENST00000467263 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.09□□□□□ -0.63
SMC4-207ENST00000467263 LAPTM4AQ15012 233 aa11.09□□□□□ -0.63
SMC4-207ENST00000467263 NRG2O14511 850 aaPredicted RBP11.08□□□□□ -0.64
SMC4-207ENST00000467263 HIC1Q14526 733 aa11.08□□□□□ -0.64
SMC4-207ENST00000467263 TRAF7Q6Q0C0 670 aa11.08□□□□□ -0.64
SMC4-207ENST00000467263 S1PR4O95977 384 aa11.07□□□□□ -0.64
SMC4-207ENST00000467263 GGCXP38435 758 aa11.07□□□□□ -0.64
SMC4-207ENST00000467263 KMT5BQ4FZB7 885 aa11.07□□□□□ -0.64
SMC4-207ENST00000467263 TRIM67Q6ZTA4 783 aa11.07□□□□□ -0.64
SMC4-207ENST00000467263 TMUB1Q9BVT8 246 aa11.07□□□□□ -0.64
SMC4-207ENST00000467263 PUS10Q3MIT2 529 aaKnown RBP11.06□□□□□ -0.64
SMC4-207ENST00000467263 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
SMC4-207ENST00000467263 KDM2AQ9Y2K7 1162 aa11.06□□□□□ -0.64
SMC4-207ENST00000467263 OATP04181 439 aa11.05□□□□□ -0.64
SMC4-207ENST00000467263 GNPATO15228 680 aa11.04□□□□□ -0.64
SMC4-207ENST00000467263 PHOX2BQ99453 314 aa11.04□□□□□ -0.64
SMC4-207ENST00000467263 SLC19A1P41440 591 aa11.02□□□□□ -0.65
SMC4-207ENST00000467263 LIAT1Q6ZQX7 453 aa11.02□□□□□ -0.65
SMC4-207ENST00000467263 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
SMC4-207ENST00000467263 PLA2G2CQ5R387 149 aa11.01□□□□□ -0.65
SMC4-207ENST00000467263 SCUBE3Q8IX30 993 aa11.01□□□□□ -0.65
SMC4-207ENST00000467263 ADH1BP00325 375 aa11□□□□□ -0.65
SMC4-207ENST00000467263 NR1I2O75469 434 aa10.98□□□□□ -0.65
SMC4-207ENST00000467263 SPRYD7Q5W111 196 aa10.98□□□□□ -0.65
SMC4-207ENST00000467263 SMYD5Q6GMV2 418 aa10.98□□□□□ -0.65
SMC4-207ENST00000467263 ANKLE1Q8NAG6 615 aa10.98□□□□□ -0.65
SMC4-207ENST00000467263 DDX11L8A8MPP1 907 aa10.96□□□□□ -0.65
SMC4-207ENST00000467263 DAXXQ9UER7 740 aaPredicted RBP10.96□□□□□ -0.65
SMC4-207ENST00000467263 FUT2Q10981 343 aa10.95□□□□□ -0.66
SMC4-207ENST00000467263 RDH13Q8NBN7 331 aa10.95□□□□□ -0.66
SMC4-207ENST00000467263 SLC6A16Q9GZN6 736 aa10.95□□□□□ -0.66
SMC4-207ENST00000467263 MORN1Q5T089 497 aa10.93□□□□□ -0.66
SMC4-207ENST00000467263 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
SMC4-207ENST00000467263 SPSB2Q99619 263 aa10.93□□□□□ -0.66
SMC4-207ENST00000467263 GPIHBP1Q8IV16 184 aa10.92□□□□□ -0.66
SMC4-207ENST00000467263 TNFRSF10AO00220 468 aa10.91□□□□□ -0.66
SMC4-207ENST00000467263 ZNF697Q5TEC3 545 aa10.91□□□□□ -0.66
SMC4-207ENST00000467263 THAP11Q96EK4 314 aa10.91□□□□□ -0.66
SMC4-207ENST00000467263 SLC27A5Q9Y2P5 690 aa10.9□□□□□ -0.66
SMC4-207ENST00000467263 GDF9O60383 454 aa10.89□□□□□ -0.67
SMC4-207ENST00000467263 GCGRP47871 477 aa10.89□□□□□ -0.67
SMC4-207ENST00000467263 FAM160A2Q8N612 972 aaPredicted RBP10.89□□□□□ -0.67
SMC4-207ENST00000467263 RSPH4AQ5TD94 716 aa10.88□□□□□ -0.67
SMC4-207ENST00000467263 PRDM9Q9NQV7 894 aa10.88□□□□□ -0.67
SMC4-207ENST00000467263 ATP6V1AP38606 617 aa10.86□□□□□ -0.67
SMC4-207ENST00000467263 PRR20EP86478 221 aa10.86□□□□□ -0.67
SMC4-207ENST00000467263 PRR20CP86479 221 aa10.86□□□□□ -0.67
SMC4-207ENST00000467263 PRR20DP86480 221 aa10.86□□□□□ -0.67
SMC4-207ENST00000467263 PRR20BP86481 221 aa10.86□□□□□ -0.67
SMC4-207ENST00000467263 PRR20AP86496 221 aa10.86□□□□□ -0.67
SMC4-207ENST00000467263 MYT1Q01538 1121 aa10.85□□□□□ -0.67
SMC4-207ENST00000467263 ZNF787Q6DD87 383 aa10.85□□□□□ -0.67
SMC4-207ENST00000467263 RNF19BQ6ZMZ0 732 aa10.84□□□□□ -0.67
SMC4-207ENST00000467263 PKD2L1Q9P0L9 805 aa10.84□□□□□ -0.67
SMC4-207ENST00000467263 FCF1Q9Y324 198 aaKnown RBP10.84□□□□□ -0.67
SMC4-207ENST00000467263 POTECB2RU33 542 aa10.83□□□□□ -0.68
SMC4-207ENST00000467263 PKDCCQ504Y2 493 aa10.82□□□□□ -0.68
SMC4-207ENST00000467263 BRICD5Q6PL45 260 aa10.82□□□□□ -0.68
SMC4-207ENST00000467263 SULF1Q8IWU6 871 aa10.82□□□□□ -0.68
SMC4-207ENST00000467263 FAM187AA6NFU0 413 aa10.81□□□□□ -0.68
SMC4-207ENST00000467263 FOXC1Q12948 553 aa10.81□□□□□ -0.68
SMC4-207ENST00000467263 DGAT1O75907 488 aa10.8□□□□□ -0.68
SMC4-207ENST00000467263 FMNL1O95466 1100 aaPredicted RBP10.8□□□□□ -0.68
SMC4-207ENST00000467263 HLA-CQ95604 372 aa10.8□□□□□ -0.68
SMC4-207ENST00000467263 SLC24A1O60721 1099 aa10.79□□□□□ -0.68
SMC4-207ENST00000467263 CD46P15529 392 aa10.79□□□□□ -0.68
SMC4-207ENST00000467263 MAP2K5Q13163 448 aa10.79□□□□□ -0.68
SMC4-207ENST00000467263 IRF6O14896 467 aa10.78□□□□□ -0.68
SMC4-207ENST00000467263 ST8SIA5O15466 376 aa10.78□□□□□ -0.68
SMC4-207ENST00000467263 MDM2Q00987 491 aaPredicted RBP10.77□□□□□ -0.69
SMC4-207ENST00000467263 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
SMC4-207ENST00000467263 ZNF775Q96BV0 537 aaPredicted RBP10.77□□□□□ -0.69
SMC4-207ENST00000467263 SALL2Q9Y467 1007 aaPredicted RBP10.76□□□□□ -0.69
SMC4-207ENST00000467263 RPIAP49247 311 aa10.74□□□□□ -0.69
SMC4-207ENST00000467263 CCDC102AQ96A19 550 aa10.73□□□□□ -0.69
SMC4-207ENST00000467263 AAASQ9NRG9 546 aa10.73□□□□□ -0.69
SMC4-207ENST00000467263 MSS51Q4VC12 460 aa10.72□□□□□ -0.69
SMC4-207ENST00000467263 TOR4AQ9NXH8 423 aa10.72□□□□□ -0.69
SMC4-207ENST00000467263 DACH1Q9UI36 760 aa10.72□□□□□ -0.69
SMC4-207ENST00000467263 KDM4AO75164 1064 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms