RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 RGS12O14924 1447 aa23.59■■□□□ 1.37
HMGXB4-206ENST00000466438 ERBINQ96RT1 1412 aa23.59■■□□□ 1.37
HMGXB4-206ENST00000466438 BCANQ96GW7 911 aa23.59■■□□□ 1.37
HMGXB4-206ENST00000466438 DIP2AQ14689 1571 aa23.58■■□□□ 1.37
HMGXB4-206ENST00000466438 AFF2P51816 1311 aa23.58■■□□□ 1.36
HMGXB4-206ENST00000466438 KIF15Q9NS87 1388 aa23.56■■□□□ 1.36
HMGXB4-206ENST00000466438 CADPS2Q86UW7 1296 aa23.56■■□□□ 1.36
HMGXB4-206ENST00000466438 KANK1Q14678 1352 aa23.55■■□□□ 1.36
HMGXB4-206ENST00000466438 NUTM2BA6NNL0 878 aaPredicted RBP23.55■■□□□ 1.36
HMGXB4-206ENST00000466438 NUTM2EB1AL46 878 aaPredicted RBP23.55■■□□□ 1.36
HMGXB4-206ENST00000466438 NUTM2AQ8IVF1 878 aaPredicted RBP23.55■■□□□ 1.36
HMGXB4-206ENST00000466438 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
HMGXB4-206ENST00000466438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.54■■□□□ 1.36
HMGXB4-206ENST00000466438 PLEKHG1Q9ULL1 1385 aa23.53■■□□□ 1.36
HMGXB4-206ENST00000466438 C14orf37Q86TY3 774 aa23.53■■□□□ 1.36
HMGXB4-206ENST00000466438 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
HMGXB4-206ENST00000466438 NOS1P29475 1434 aa23.52■■□□□ 1.36
HMGXB4-206ENST00000466438 RBM6P78332 1123 aaKnown RBP23.52■■□□□ 1.36
HMGXB4-206ENST00000466438 MYOM3Q5VTT5 1437 aa23.51■■□□□ 1.35
HMGXB4-206ENST00000466438 ATF3P18847 181 aa23.5■■□□□ 1.35
HMGXB4-206ENST00000466438 FOXD1Q16676 465 aa23.5■■□□□ 1.35
HMGXB4-206ENST00000466438 C19orf44Q9H6X5 657 aa23.5■■□□□ 1.35
HMGXB4-206ENST00000466438 ZFYVE9O95405 1425 aa23.5■■□□□ 1.35
HMGXB4-206ENST00000466438 NUTM2DQ5VT03 806 aaPredicted RBP23.49■■□□□ 1.35
HMGXB4-206ENST00000466438 BRINP3Q76B58 766 aa23.48■■□□□ 1.35
HMGXB4-206ENST00000466438 SLC52A1Q9NWF4 448 aa23.48■■□□□ 1.35
HMGXB4-206ENST00000466438 ZRANB1Q9UGI0 708 aa23.48■■□□□ 1.35
HMGXB4-206ENST00000466438 QTRT2Q9H974 415 aaKnown RBP23.47■■□□□ 1.35
HMGXB4-206ENST00000466438 ATAD2Q6PL18 1390 aa23.47■■□□□ 1.35
HMGXB4-206ENST00000466438 SETD5Q9C0A6 1442 aa23.47■■□□□ 1.35
HMGXB4-206ENST00000466438 TBX22Q9Y458 520 aa23.46■■□□□ 1.35
HMGXB4-206ENST00000466438 PPP1R15AO75807 674 aaPredicted RBP23.45■■□□□ 1.34
HMGXB4-206ENST00000466438 RRP7BPQ9NSQ0 103 aa23.45■■□□□ 1.34
HMGXB4-206ENST00000466438 RIMS2Q9UQ26 1411 aa23.43■■□□□ 1.34
HMGXB4-206ENST00000466438 HDGFP51858 240 aaKnown RBP23.43■■□□□ 1.34
HMGXB4-206ENST00000466438 C8orf37Q96NL8 207 aa23.43■■□□□ 1.34
HMGXB4-206ENST00000466438 CROCC2H7BZ55 1655 aa23.43■■□□□ 1.34
HMGXB4-206ENST00000466438 SETBP1Q9Y6X0 1596 aa23.43■■□□□ 1.34
HMGXB4-206ENST00000466438 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
HMGXB4-206ENST00000466438 NGLY1Q96IV0 654 aa23.41■■□□□ 1.34
HMGXB4-206ENST00000466438 DCCP43146 1447 aa23.4■■□□□ 1.34
HMGXB4-206ENST00000466438 PIK3R4Q99570 1358 aa23.4■■□□□ 1.34
HMGXB4-206ENST00000466438 MYO5BQ9ULV0 1848 aa23.39■■□□□ 1.33
HMGXB4-206ENST00000466438 NHSL1Q5SYE7 1610 aa23.39■■□□□ 1.33
HMGXB4-206ENST00000466438 ABCC5O15440 1437 aa23.39■■□□□ 1.33
HMGXB4-206ENST00000466438 LRRC59Q96AG4 307 aaKnown RBP23.38■■□□□ 1.33
HMGXB4-206ENST00000466438 ADAMTS13Q76LX8 1427 aa23.38■■□□□ 1.33
HMGXB4-206ENST00000466438 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
HMGXB4-206ENST00000466438 RPRD2Q5VT52 1461 aaKnown RBP23.36■■□□□ 1.33
HMGXB4-206ENST00000466438 TMEM131LA2VDJ0 1609 aa23.35■■□□□ 1.33
HMGXB4-206ENST00000466438 PNPLA6Q8IY17 1366 aa23.35■■□□□ 1.33
HMGXB4-206ENST00000466438 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.34■■□□□ 1.33
HMGXB4-206ENST00000466438 MST1RQ04912 1400 aa23.32■■□□□ 1.32
HMGXB4-206ENST00000466438 EP400Q96L91 3159 aa23.31■■□□□ 1.32
HMGXB4-206ENST00000466438 TRPM2O94759 1503 aa23.31■■□□□ 1.32
HMGXB4-206ENST00000466438 DAPK1P53355 1430 aa23.3■■□□□ 1.32
HMGXB4-206ENST00000466438 CCDC125Q86Z20 511 aa23.29■■□□□ 1.32
HMGXB4-206ENST00000466438 AMOTL2Q9Y2J4 779 aa23.28■■□□□ 1.32
HMGXB4-206ENST00000466438 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
HMGXB4-206ENST00000466438 PTPRUQ92729 1446 aa23.27■■□□□ 1.32
HMGXB4-206ENST00000466438 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
HMGXB4-206ENST00000466438 ADAMTS2O95450 1211 aa23.26■■□□□ 1.31
HMGXB4-206ENST00000466438 KANK4Q5T7N3 995 aaPredicted RBP23.26■■□□□ 1.31
HMGXB4-206ENST00000466438 PTPN23Q9H3S7 1636 aa23.26■■□□□ 1.31
HMGXB4-206ENST00000466438 USP21Q9UK80 565 aa23.25■■□□□ 1.31
HMGXB4-206ENST00000466438 DDX17Q92841 729 aaKnown RBP23.23■■□□□ 1.31
HMGXB4-206ENST00000466438 XRN1Q8IZH2 1706 aaKnown RBP23.22■■□□□ 1.31
HMGXB4-206ENST00000466438 ATRNO75882 1429 aa23.22■■□□□ 1.31
HMGXB4-206ENST00000466438 CHGAP10645 457 aaKnown RBP23.21■■□□□ 1.31
HMGXB4-206ENST00000466438 VPS8Q8N3P4 1428 aa23.21■■□□□ 1.31
HMGXB4-206ENST00000466438 FNBP4Q8N3X1 1017 aaPredicted RBP23.2■■□□□ 1.3
HMGXB4-206ENST00000466438 UNC13BO14795 1591 aa23.19■■□□□ 1.3
HMGXB4-206ENST00000466438 CHIC2Q9UKJ5 165 aa23.19■■□□□ 1.3
HMGXB4-206ENST00000466438 PTCH1Q13635 1447 aa23.18■■□□□ 1.3
HMGXB4-206ENST00000466438 LRP5O75197 1615 aa23.18■■□□□ 1.3
HMGXB4-206ENST00000466438 ADGRL3Q9HAR2 1447 aa23.16■■□□□ 1.3
HMGXB4-206ENST00000466438 LAMC1P11047 1609 aa23.16■■□□□ 1.3
HMGXB4-206ENST00000466438 ADGRL2O95490 1459 aa23.12■■□□□ 1.29
HMGXB4-206ENST00000466438 NRXN3Q9Y4C0 1643 aa23.12■■□□□ 1.29
HMGXB4-206ENST00000466438 BLMP54132 1417 aaPredicted RBP23.12■■□□□ 1.29
HMGXB4-206ENST00000466438 C1orf167Q5SNV9 1468 aa23.11■■□□□ 1.29
HMGXB4-206ENST00000466438 NALCNQ8IZF0 1738 aa23.11■■□□□ 1.29
HMGXB4-206ENST00000466438 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
HMGXB4-206ENST00000466438 ANKRD50Q9ULJ7 1429 aa23.1■■□□□ 1.29
HMGXB4-206ENST00000466438 COL22A1Q8NFW1 1626 aaPredicted RBP23.08■■□□□ 1.29
HMGXB4-206ENST00000466438 BCL9LQ86UU0 1499 aa23.08■■□□□ 1.29
HMGXB4-206ENST00000466438 E9PCH4 1651 aa23.06■■□□□ 1.28
HMGXB4-206ENST00000466438 METP08581 1390 aa23.05■■□□□ 1.28
HMGXB4-206ENST00000466438 GJD4Q96KN9 370 aaPredicted RBP23.05■■□□□ 1.28
HMGXB4-206ENST00000466438 MYOM2P54296 1465 aa23.05■■□□□ 1.28
HMGXB4-206ENST00000466438 DEFB132Q7Z7B7 95 aa23.03■■□□□ 1.28
HMGXB4-206ENST00000466438 IQGAP3Q86VI3 1631 aa23.02■■□□□ 1.28
HMGXB4-206ENST00000466438 MARF1Q9Y4F3 1742 aaKnown RBP23■■□□□ 1.27
HMGXB4-206ENST00000466438 ORAI2Q96SN7 254 aa23■■□□□ 1.27
HMGXB4-206ENST00000466438 SF3B2Q13435 895 aaKnown RBP22.99■■□□□ 1.27
HMGXB4-206ENST00000466438 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.99■■□□□ 1.27
HMGXB4-206ENST00000466438 SPHKAPQ2M3C7 1700 aa22.98■■□□□ 1.27
HMGXB4-206ENST00000466438 RALGAPBQ86X10 1494 aa22.96■■□□□ 1.27
HMGXB4-206ENST00000466438 GLI3P10071 1580 aa22.96■■□□□ 1.27
HMGXB4-206ENST00000466438 BRWD3Q6RI45 1802 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms