RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 NBR1Q14596 966 aa21.59■■□□□ 1.05
SLX4-202ENST00000466154 RTEL1-TNFRSF6BF6WH68 1400 aa21.58■■□□□ 1.05
SLX4-202ENST00000466154 SCAF11Q99590 1463 aaKnown RBP21.58■■□□□ 1.05
SLX4-202ENST00000466154 ANP32AP39687 249 aaKnown RBP21.58■■□□□ 1.04
SLX4-202ENST00000466154 SAFB2Q14151 953 aaKnown RBP eCLIP21.57■■□□□ 1.04
SLX4-202ENST00000466154 C20orf194Q5TEA3 1177 aa21.57■■□□□ 1.04
SLX4-202ENST00000466154 EIF3AQ14152 1382 aaKnown RBP21.57■■□□□ 1.04
SLX4-202ENST00000466154 CLTCL1P53675 1640 aa21.56■■□□□ 1.04
SLX4-202ENST00000466154 NEUROD2Q15784 382 aa21.55■■□□□ 1.04
SLX4-202ENST00000466154 RAPGEF3O95398 923 aa21.55■■□□□ 1.04
SLX4-202ENST00000466154 CFAP65Q6ZU64 1925 aaKnown RBP21.55■■□□□ 1.04
SLX4-202ENST00000466154 APAF1O14727 1248 aa21.54■■□□□ 1.04
SLX4-202ENST00000466154 PAK3O75914 559 aaPredicted RBP21.54■■□□□ 1.04
SLX4-202ENST00000466154 TRPM2O94759 1503 aa21.54■■□□□ 1.04
SLX4-202ENST00000466154 MADDQ8WXG6 1647 aa21.53■■□□□ 1.04
SLX4-202ENST00000466154 NOP58Q9Y2X3 529 aaKnown RBP21.52■■□□□ 1.04
SLX4-202ENST00000466154 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
SLX4-202ENST00000466154 PTPRTO14522 1441 aa21.51■■□□□ 1.03
SLX4-202ENST00000466154 PLEKHH1Q9ULM0 1364 aa21.51■■□□□ 1.03
SLX4-202ENST00000466154 GOLGA2Q08379 1002 aa21.5■■□□□ 1.03
SLX4-202ENST00000466154 CARD14Q9BXL6 1004 aa21.5■■□□□ 1.03
SLX4-202ENST00000466154 SPHKAPQ2M3C7 1700 aa21.49■■□□□ 1.03
SLX4-202ENST00000466154 SLC12A5Q9H2X9 1139 aa21.49■■□□□ 1.03
SLX4-202ENST00000466154 NOS1P29475 1434 aa21.48■■□□□ 1.03
SLX4-202ENST00000466154 LAMC1P11047 1609 aa21.48■■□□□ 1.03
SLX4-202ENST00000466154 BLMP54132 1417 aaPredicted RBP21.48■■□□□ 1.03
SLX4-202ENST00000466154 STAC3Q96MF2 364 aa21.47■■□□□ 1.03
SLX4-202ENST00000466154 CENPJQ9HC77 1338 aaPredicted RBP21.46■■□□□ 1.03
SLX4-202ENST00000466154 STK26Q9P289 416 aa21.46■■□□□ 1.03
SLX4-202ENST00000466154 CD109Q6YHK3 1445 aa21.46■■□□□ 1.03
SLX4-202ENST00000466154 RRP7AQ9Y3A4 280 aaKnown RBP21.46■■□□□ 1.03
SLX4-202ENST00000466154 ZBTB47Q9UFB7 747 aaPredicted RBP21.45■■□□□ 1.02
SLX4-202ENST00000466154 DUSP27Q5VZP5 1158 aa21.45■■□□□ 1.02
SLX4-202ENST00000466154 MORC1Q86VD1 984 aa21.45■■□□□ 1.02
SLX4-202ENST00000466154 RNF17Q9BXT8 1623 aaKnown RBP21.44■■□□□ 1.02
SLX4-202ENST00000466154 SPINK5Q9NQ38 1064 aaPredicted RBP21.44■■□□□ 1.02
SLX4-202ENST00000466154 TET3O43151 1660 aa21.43■■□□□ 1.02
SLX4-202ENST00000466154 ASXL1Q8IXJ9 1541 aa21.43■■□□□ 1.02
SLX4-202ENST00000466154 PDE4AP27815 886 aa21.42■■□□□ 1.02
SLX4-202ENST00000466154 CEP152O94986 1710 aa21.41■■□□□ 1.02
SLX4-202ENST00000466154 IPO9Q96P70 1041 aaKnown RBP21.41■■□□□ 1.02
SLX4-202ENST00000466154 INO80Q9ULG1 1556 aaPredicted RBP21.4■■□□□ 1.02
SLX4-202ENST00000466154 ABCA9Q8IUA7 1624 aa21.4■■□□□ 1.02
SLX4-202ENST00000466154 TCERG1O14776 1098 aaKnown RBP21.4■■□□□ 1.02
SLX4-202ENST00000466154 ARAP3Q8WWN8 1544 aa21.4■■□□□ 1.02
SLX4-202ENST00000466154 IQGAP1P46940 1657 aa21.39■■□□□ 1.02
SLX4-202ENST00000466154 BCAR3O75815 825 aa21.39■■□□□ 1.02
SLX4-202ENST00000466154 CANXP27824 592 aaKnown RBP21.39■■□□□ 1.02
SLX4-202ENST00000466154 DMRT2Q9Y5R5 561 aa21.39■■□□□ 1.01
SLX4-202ENST00000466154 ZNF518AQ6AHZ1 1483 aa21.39■■□□□ 1.01
SLX4-202ENST00000466154 ZMYM4Q5VZL5 1548 aa21.38■■□□□ 1.01
SLX4-202ENST00000466154 ERVK-7P63135 1459 aa21.38■■□□□ 1.01
SLX4-202ENST00000466154 RGS3P49796 1198 aa21.37■■□□□ 1.01
SLX4-202ENST00000466154 SLFN5Q08AF3 891 aa21.36■■□□□ 1.01
SLX4-202ENST00000466154 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.36■■□□□ 1.01
SLX4-202ENST00000466154 CABP2Q9NPB3 220 aa21.36■■□□□ 1.01
SLX4-202ENST00000466154 DEPDC5O75140 1603 aa21.35■■□□□ 1.01
SLX4-202ENST00000466154 NPATQ14207 1427 aa21.35■■□□□ 1.01
SLX4-202ENST00000466154 NSD3Q9BZ95 1437 aa21.35■■□□□ 1.01
SLX4-202ENST00000466154 FRAT1Q92837 279 aaPredicted RBP21.35■■□□□ 1.01
SLX4-202ENST00000466154 PRKCSHP14314 528 aaPredicted RBP21.34■■□□□ 1.01
SLX4-202ENST00000466154 SYNMO15061 1565 aa21.34■■□□□ 1.01
SLX4-202ENST00000466154 ABCA6Q8N139 1617 aa21.34■■□□□ 1.01
SLX4-202ENST00000466154 SLC24A1O60721 1099 aa21.33■■□□□ 1
SLX4-202ENST00000466154 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1
SLX4-202ENST00000466154 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1
SLX4-202ENST00000466154 EFCAB6Q5THR3 1501 aa21.33■■□□□ 1
SLX4-202ENST00000466154 MROH1Q8NDA8 1641 aa21.32■■□□□ 1
SLX4-202ENST00000466154 MAP3K4Q9Y6R4 1608 aa21.32■■□□□ 1
SLX4-202ENST00000466154 PPRC1Q5VV67 1664 aaKnown RBP21.32■■□□□ 1
SLX4-202ENST00000466154 C14orf93Q9H972 538 aaKnown RBP21.32■■□□□ 1
SLX4-202ENST00000466154 LAS1LQ9Y4W2 734 aaKnown RBP21.32■■□□□ 1
SLX4-202ENST00000466154 SRPK2P78362 688 aaKnown RBP21.32■■□□□ 1
SLX4-202ENST00000466154 KDM5AP29375 1690 aaKnown RBP21.31■■□□□ 1
SLX4-202ENST00000466154 MTHFSP49914 203 aa21.31■■□□□ 1
SLX4-202ENST00000466154 PIK3C2GO75747 1445 aa21.31■■□□□ 1
SLX4-202ENST00000466154 BCL2L13Q9BXK5 485 aa21.31■■□□□ 1
SLX4-202ENST00000466154 KIF1BO60333 1816 aa21.3■■□□□ 1
SLX4-202ENST00000466154 VWDEQ8N2E2 1590 aa21.3■■□□□ 1
SLX4-202ENST00000466154 BACH2Q9BYV9 841 aa21.3■■□□□ 1
SLX4-202ENST00000466154 STAG3Q9UJ98 1225 aa21.3■■□□□ 1
SLX4-202ENST00000466154 ZNF521Q96K83 1311 aa21.29■■□□□ 1
SLX4-202ENST00000466154 IDI1Q13907 227 aa21.29■■□□□ 1
SLX4-202ENST00000466154 POGZQ7Z3K3 1410 aa21.28■■□□□ 1
SLX4-202ENST00000466154 MROH2AA6NES4 1674 aa21.28■■□□□ 1
SLX4-202ENST00000466154 MYOM2P54296 1465 aa21.27■■□□□ 1
SLX4-202ENST00000466154 E9PSI1 815 aa21.27■■□□□ 1
SLX4-202ENST00000466154 VGFO15240 615 aaPredicted RBP21.27■■□□□ 1
SLX4-202ENST00000466154 MINK1Q8N4C8 1332 aaPredicted RBP21.27■□□□□ 0.99
SLX4-202ENST00000466154 U2AF1L5P0DN76 240 aaPredicted RBP21.27■□□□□ 0.99
SLX4-202ENST00000466154 U2AF1Q01081 240 aaKnown RBP eCLIP21.27■□□□□ 0.99
SLX4-202ENST00000466154 MLECQ14165 292 aa21.26■□□□□ 0.99
SLX4-202ENST00000466154 MYOM1P52179 1685 aa21.26■□□□□ 0.99
SLX4-202ENST00000466154 U2SURPO15042 1029 aaKnown RBP21.25■□□□□ 0.99
SLX4-202ENST00000466154 RTL5Q5HYW3 569 aaPredicted RBP21.25■□□□□ 0.99
SLX4-202ENST00000466154 WWC1Q8IX03 1113 aa21.25■□□□□ 0.99
SLX4-202ENST00000466154 TCP11L2Q8N4U5 519 aa21.25■□□□□ 0.99
SLX4-202ENST00000466154 PANK1Q8TE04 598 aa21.25■□□□□ 0.99
SLX4-202ENST00000466154 COG6Q9Y2V7 657 aa21.25■□□□□ 0.99
SLX4-202ENST00000466154 INSRP06213 1382 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms