RNA–Protein interactions for RNA: ENST00000466058.1

KDM3A-209, Transcript of lysine demethylase 3A, humanhuman

TSL 4

Gene KDM3A, Length 448 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-209ENST00000466058 TXNDC2Q86VQ3 553 aa9.47□□□□□ -0.89
KDM3A-209ENST00000466058 REM2Q8IYK8 340 aaPredicted RBP9.47□□□□□ -0.89
KDM3A-209ENST00000466058 MSH6P52701 1360 aa9.47□□□□□ -0.89
KDM3A-209ENST00000466058 CFAP65Q6ZU64 1925 aaKnown RBP9.46□□□□□ -0.89
KDM3A-209ENST00000466058 SCAF11Q99590 1463 aaKnown RBP9.46□□□□□ -0.9
KDM3A-209ENST00000466058 NHSL1Q5SYE7 1610 aa9.45□□□□□ -0.9
KDM3A-209ENST00000466058 PREX2Q70Z35 1606 aa9.45□□□□□ -0.9
KDM3A-209ENST00000466058 ADGBQ8N7X0 1667 aa9.45□□□□□ -0.9
KDM3A-209ENST00000466058 CDK11AQ9UQ88 783 aaPredicted RBP9.44□□□□□ -0.9
KDM3A-209ENST00000466058 TIAM1Q13009 1591 aa9.44□□□□□ -0.9
KDM3A-209ENST00000466058 NWD1Q149M9 1564 aa9.44□□□□□ -0.9
KDM3A-209ENST00000466058 SYCP2Q9BX26 1530 aa9.43□□□□□ -0.9
KDM3A-209ENST00000466058 TROQ12816 1431 aaPredicted RBP9.43□□□□□ -0.9
KDM3A-209ENST00000466058 ADAMTS2O95450 1211 aa9.43□□□□□ -0.9
KDM3A-209ENST00000466058 KCNA6P17658 529 aa9.43□□□□□ -0.9
KDM3A-209ENST00000466058 C1QTNF8P60827 252 aa9.43□□□□□ -0.9
KDM3A-209ENST00000466058 WASHC2CQ9Y4E1 1318 aa9.42□□□□□ -0.9
KDM3A-209ENST00000466058 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
KDM3A-209ENST00000466058 UBR1Q8IWV7 1749 aa9.42□□□□□ -0.9
KDM3A-209ENST00000466058 AHDC1Q5TGY3 1603 aaPredicted RBP9.42□□□□□ -0.9
KDM3A-209ENST00000466058 DIP2AQ14689 1571 aa9.41□□□□□ -0.9
KDM3A-209ENST00000466058 KIF3BO15066 747 aa9.41□□□□□ -0.9
KDM3A-209ENST00000466058 ZNF784Q8NCA9 323 aaPredicted RBP9.41□□□□□ -0.9
KDM3A-209ENST00000466058 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
KDM3A-209ENST00000466058 CDC42BPAQ5VT25 1732 aa9.41□□□□□ -0.9
KDM3A-209ENST00000466058 INO80Q9ULG1 1556 aaPredicted RBP9.41□□□□□ -0.9
KDM3A-209ENST00000466058 PRDM15P57071 1507 aaPredicted RBP9.41□□□□□ -0.9
KDM3A-209ENST00000466058 CLIP1P30622 1438 aa9.4□□□□□ -0.9
KDM3A-209ENST00000466058 KDM5AP29375 1690 aaKnown RBP9.4□□□□□ -0.9
KDM3A-209ENST00000466058 MKRN4PQ13434 485 aaPredicted RBP9.4□□□□□ -0.9
KDM3A-209ENST00000466058 SF3B2Q13435 895 aaKnown RBP9.4□□□□□ -0.9
KDM3A-209ENST00000466058 USP21Q9UK80 565 aa9.4□□□□□ -0.9
KDM3A-209ENST00000466058 NCOA2Q15596 1464 aa9.4□□□□□ -0.91
KDM3A-209ENST00000466058 BLMP54132 1417 aaPredicted RBP9.39□□□□□ -0.91
KDM3A-209ENST00000466058 EID1Q9Y6B2 187 aa9.39□□□□□ -0.91
KDM3A-209ENST00000466058 BCL9LQ86UU0 1499 aa9.39□□□□□ -0.91
KDM3A-209ENST00000466058 R3HDM1Q15032 1099 aaKnown RBP9.38□□□□□ -0.91
KDM3A-209ENST00000466058 C14orf37Q86TY3 774 aa9.38□□□□□ -0.91
KDM3A-209ENST00000466058 TRPC5Q9UL62 973 aaPredicted RBP9.38□□□□□ -0.91
KDM3A-209ENST00000466058 SSUH2Q9Y2M2 353 aa9.36□□□□□ -0.91
KDM3A-209ENST00000466058 UTRNP46939 3433 aa9.35□□□□□ -0.91
KDM3A-209ENST00000466058 PITPNM1O00562 1244 aa9.35□□□□□ -0.91
KDM3A-209ENST00000466058 LRRIQ1Q96JM4 1722 aa9.35□□□□□ -0.91
KDM3A-209ENST00000466058 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
KDM3A-209ENST00000466058 ABCC3O15438 1527 aa9.35□□□□□ -0.91
KDM3A-209ENST00000466058 ARHGAP23Q9P227 1491 aa9.34□□□□□ -0.91
KDM3A-209ENST00000466058 MAST1Q9Y2H9 1570 aa9.34□□□□□ -0.91
KDM3A-209ENST00000466058 BRWD3Q6RI45 1802 aa9.34□□□□□ -0.91
KDM3A-209ENST00000466058 BRINP3Q76B58 766 aa9.34□□□□□ -0.91
KDM3A-209ENST00000466058 BCANQ96GW7 911 aa9.34□□□□□ -0.91
KDM3A-209ENST00000466058 CAMTA1Q9Y6Y1 1673 aa9.34□□□□□ -0.91
KDM3A-209ENST00000466058 SLIT1O75093 1534 aa9.34□□□□□ -0.91
KDM3A-209ENST00000466058 NKTRP30414 1462 aaKnown RBP9.34□□□□□ -0.91
KDM3A-209ENST00000466058 ATRNO75882 1429 aa9.33□□□□□ -0.92
KDM3A-209ENST00000466058 DDX17Q92841 729 aaKnown RBP9.33□□□□□ -0.92
KDM3A-209ENST00000466058 DHX29Q7Z478 1369 aaKnown RBP9.33□□□□□ -0.92
KDM3A-209ENST00000466058 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.33□□□□□ -0.92
KDM3A-209ENST00000466058 ATF3P18847 181 aa9.32□□□□□ -0.92
KDM3A-209ENST00000466058 LRRC59Q96AG4 307 aaKnown RBP9.32□□□□□ -0.92
KDM3A-209ENST00000466058 ERVK-7P63135 1459 aa9.32□□□□□ -0.92
KDM3A-209ENST00000466058 PNPLA6Q8IY17 1366 aa9.31□□□□□ -0.92
KDM3A-209ENST00000466058 SETD5Q9C0A6 1442 aa9.31□□□□□ -0.92
KDM3A-209ENST00000466058 CADPS2Q86UW7 1296 aa9.3□□□□□ -0.92
KDM3A-209ENST00000466058 BAG6P46379 1132 aa9.29□□□□□ -0.92
KDM3A-209ENST00000466058 PPP1R1BQ9UD71 204 aaPredicted RBP9.29□□□□□ -0.92
KDM3A-209ENST00000466058 STAG3Q9UJ98 1225 aa9.29□□□□□ -0.92
KDM3A-209ENST00000466058 TET3O43151 1660 aa9.29□□□□□ -0.92
KDM3A-209ENST00000466058 CHD2O14647 1828 aaKnown RBP9.28□□□□□ -0.92
KDM3A-209ENST00000466058 TMEM2Q9UHN6 1383 aa9.28□□□□□ -0.92
KDM3A-209ENST00000466058 EN1Q05925 392 aaPredicted RBP9.28□□□□□ -0.92
KDM3A-209ENST00000466058 FNBP4Q8N3X1 1017 aaPredicted RBP9.28□□□□□ -0.92
KDM3A-209ENST00000466058 GJD4Q96KN9 370 aaPredicted RBP9.28□□□□□ -0.92
KDM3A-209ENST00000466058 RTEL1-TNFRSF6BF6WH68 1400 aa9.28□□□□□ -0.92
KDM3A-209ENST00000466058 SLC34A2O95436 690 aa9.27□□□□□ -0.93
KDM3A-209ENST00000466058 PIK3C2BO00750 1634 aa9.27□□□□□ -0.93
KDM3A-209ENST00000466058 ASXL1Q8IXJ9 1541 aa9.26□□□□□ -0.93
KDM3A-209ENST00000466058 KIAA1107Q9UPP5 1409 aa9.26□□□□□ -0.93
KDM3A-209ENST00000466058 C19orf44Q9H6X5 657 aa9.26□□□□□ -0.93
KDM3A-209ENST00000466058 CFDP1Q9UEE9 299 aaPredicted RBP9.26□□□□□ -0.93
KDM3A-209ENST00000466058 GPATCH8Q9UKJ3 1502 aaKnown RBP9.26□□□□□ -0.93
KDM3A-209ENST00000466058 UNC13BO14795 1591 aa9.25□□□□□ -0.93
KDM3A-209ENST00000466058 CHD4Q14839 1912 aa9.25□□□□□ -0.93
KDM3A-209ENST00000466058 SPDYE4A6NLX3 237 aa9.25□□□□□ -0.93
KDM3A-209ENST00000466058 PRR29P0C7W0 189 aa9.25□□□□□ -0.93
KDM3A-209ENST00000466058 PIP4P2Q8N4L2 257 aa9.25□□□□□ -0.93
KDM3A-209ENST00000466058 ZNF644Q9H582 1327 aaPredicted RBP9.25□□□□□ -0.93
KDM3A-209ENST00000466058 CEP152O94986 1710 aa9.25□□□□□ -0.93
KDM3A-209ENST00000466058 FMN1Q68DA7 1419 aa9.24□□□□□ -0.93
KDM3A-209ENST00000466058 PLEKHH2Q8IVE3 1493 aa9.24□□□□□ -0.93
KDM3A-209ENST00000466058 GIGYF1O75420 1035 aaPredicted RBP9.24□□□□□ -0.93
KDM3A-209ENST00000466058 MROH1Q8NDA8 1641 aa9.23□□□□□ -0.93
KDM3A-209ENST00000466058 CAMSAP2Q08AD1 1489 aa9.23□□□□□ -0.93
KDM3A-209ENST00000466058 GLI3P10071 1580 aa9.22□□□□□ -0.93
KDM3A-209ENST00000466058 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.933e-6■■□□□ 14.2
KDM3A-209ENST00000466058 SEPT12Q8IYM1 358 aa9.22□□□□□ -0.93
KDM3A-209ENST00000466058 FBXO3Q9UK99 471 aa9.22□□□□□ -0.93
KDM3A-209ENST00000466058 RALGAPBQ86X10 1494 aa9.21□□□□□ -0.94
KDM3A-209ENST00000466058 ARHGAP35Q9NRY4 1499 aa9.21□□□□□ -0.94
KDM3A-209ENST00000466058 SPHKAPQ2M3C7 1700 aa9.2□□□□□ -0.94
KDM3A-209ENST00000466058 EZH2Q15910 746 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms