RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 ESF1Q9H501 851 aaKnown RBP14.78□□□□□ -0.04
ATG3-203ENST00000465980 CLTCQ00610 1675 aaKnown RBP14.77□□□□□ -0.04
ATG3-203ENST00000465980 PLXNC1O60486 1568 aa14.77□□□□□ -0.04
ATG3-203ENST00000465980 CAMSAP2Q08AD1 1489 aa14.76□□□□□ -0.05
ATG3-203ENST00000465980 MROH2AA6NES4 1674 aa14.76□□□□□ -0.05
ATG3-203ENST00000465980 A2MP01023 1474 aa14.76□□□□□ -0.05
ATG3-203ENST00000465980 SPOCK2Q92563 424 aa14.75□□□□□ -0.05
ATG3-203ENST00000465980 MBD5Q9P267 1494 aa14.75□□□□□ -0.05
ATG3-203ENST00000465980 UHRF1BP1Q6BDS2 1440 aa14.75□□□□□ -0.05
ATG3-203ENST00000465980 LRRC9Q6ZRR7 1453 aa14.74□□□□□ -0.05
ATG3-203ENST00000465980 STRCQ7RTU9 1775 aa14.73□□□□□ -0.05
ATG3-203ENST00000465980 IFNLR1Q8IU57 520 aaPredicted RBP14.73□□□□□ -0.05
ATG3-203ENST00000465980 CCDC141Q6ZP82 1450 aa14.72□□□□□ -0.05
ATG3-203ENST00000465980 CNTLNQ9NXG0 1405 aa14.72□□□□□ -0.05
ATG3-203ENST00000465980 GOLGA2Q08379 1002 aa14.71□□□□□ -0.05
ATG3-203ENST00000465980 GGT6Q6P531 493 aa14.7□□□□□ -0.06
ATG3-203ENST00000465980 MKRN3Q13064 507 aaKnown RBP14.69□□□□□ -0.06
ATG3-203ENST00000465980 ARHGEF5Q12774 1597 aa14.68□□□□□ -0.06
ATG3-203ENST00000465980 PSEN1P49768 467 aa14.68□□□□□ -0.06
ATG3-203ENST00000465980 KANK4Q5T7N3 995 aaPredicted RBP14.68□□□□□ -0.06
ATG3-203ENST00000465980 RTEL1-TNFRSF6BF6WH68 1400 aa14.67□□□□□ -0.06
ATG3-203ENST00000465980 MAP3K1Q13233 1512 aa14.67□□□□□ -0.06
ATG3-203ENST00000465980 ZMYM3Q14202 1370 aa14.66□□□□□ -0.06
ATG3-203ENST00000465980 PDCD7Q8N8D1 485 aaKnown RBP14.66□□□□□ -0.06
ATG3-203ENST00000465980 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.66□□□□□ -0.06
ATG3-203ENST00000465980 MYO3AQ8NEV4 1616 aa14.66□□□□□ -0.06
ATG3-203ENST00000465980 PDAP1Q13442 181 aaKnown RBP14.64□□□□□ -0.07
ATG3-203ENST00000465980 NPATQ14207 1427 aa14.64□□□□□ -0.07
ATG3-203ENST00000465980 ZNF142P52746 1687 aaPredicted RBP14.64□□□□□ -0.07
ATG3-203ENST00000465980 DHX29Q7Z478 1369 aaKnown RBP14.63□□□□□ -0.07
ATG3-203ENST00000465980 FBXO41Q8TF61 875 aa14.63□□□□□ -0.07
ATG3-203ENST00000465980 CIZ1Q9ULV3 898 aaPredicted RBP14.63□□□□□ -0.07
ATG3-203ENST00000465980 MYOM3Q5VTT5 1437 aa14.63□□□□□ -0.07
ATG3-203ENST00000465980 KIF3BO15066 747 aa14.62□□□□□ -0.07
ATG3-203ENST00000465980 ST18O60284 1047 aa14.62□□□□□ -0.07
ATG3-203ENST00000465980 CFAP65Q6ZU64 1925 aaKnown RBP14.62□□□□□ -0.07
ATG3-203ENST00000465980 CAMSAP1Q5T5Y3 1602 aa14.62□□□□□ -0.07
ATG3-203ENST00000465980 CROCC2H7BZ55 1655 aa14.61□□□□□ -0.07
ATG3-203ENST00000465980 PTPRKQ15262 1439 aa14.61□□□□□ -0.07
ATG3-203ENST00000465980 L3MBTL3Q96JM7 780 aaPredicted RBP14.61□□□□□ -0.07
ATG3-203ENST00000465980 MAST1Q9Y2H9 1570 aa14.6□□□□□ -0.07
ATG3-203ENST00000465980 SNPHO15079 494 aa14.6□□□□□ -0.07
ATG3-203ENST00000465980 TSPY4P0CV99 314 aa14.6□□□□□ -0.07
ATG3-203ENST00000465980 TSPY10P0CW01 314 aa14.6□□□□□ -0.07
ATG3-203ENST00000465980 RSPH4AQ5TD94 716 aa14.6□□□□□ -0.07
ATG3-203ENST00000465980 KDM5DQ9BY66 1539 aa14.6□□□□□ -0.07
ATG3-203ENST00000465980 CEP170BQ9Y4F5 1589 aaPredicted RBP14.6□□□□□ -0.07
ATG3-203ENST00000465980 PTPN23Q9H3S7 1636 aa14.59□□□□□ -0.07
ATG3-203ENST00000465980 NCOA1Q15788 1441 aa14.58□□□□□ -0.07
ATG3-203ENST00000465980 MIA2Q96PC5 1412 aa14.58□□□□□ -0.07
ATG3-203ENST00000465980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.58□□□□□ -0.08
ATG3-203ENST00000465980 RNF17Q9BXT8 1623 aaKnown RBP14.57□□□□□ -0.08
ATG3-203ENST00000465980 CERKQ8TCT0 537 aa14.57□□□□□ -0.08
ATG3-203ENST00000465980 CEP152O94986 1710 aa14.57□□□□□ -0.08
ATG3-203ENST00000465980 TMEM121BQ9BXQ6 578 aaPredicted RBP14.56□□□□□ -0.08
ATG3-203ENST00000465980 EIF2AK4Q9P2K8 1649 aaKnown RBP14.55□□□□□ -0.08
ATG3-203ENST00000465980 C3orf67Q6ZVT6 689 aa14.55□□□□□ -0.08
ATG3-203ENST00000465980 PTPRTO14522 1441 aa14.55□□□□□ -0.08
ATG3-203ENST00000465980 FAM135AQ9P2D6 1515 aa14.55□□□□□ -0.08
ATG3-203ENST00000465980 NCKAP5LQ9HCH0 1330 aa14.54□□□□□ -0.08
ATG3-203ENST00000465980 WASHC2CQ9Y4E1 1318 aa14.54□□□□□ -0.08
ATG3-203ENST00000465980 ZC3H13Q5T200 1668 aaKnown RBP14.54□□□□□ -0.08
ATG3-203ENST00000465980 POLR1AO95602 1720 aaPredicted RBP14.54□□□□□ -0.08
ATG3-203ENST00000465980 DNMT1P26358 1616 aaKnown RBP14.53□□□□□ -0.08
ATG3-203ENST00000465980 PZPP20742 1482 aa14.53□□□□□ -0.08
ATG3-203ENST00000465980 FBXO31Q5XUX0 539 aaPredicted RBP14.53□□□□□ -0.08
ATG3-203ENST00000465980 CDAN1Q8IWY9 1227 aa14.53□□□□□ -0.08
ATG3-203ENST00000465980 MROH1Q8NDA8 1641 aa14.52□□□□□ -0.08
ATG3-203ENST00000465980 A2ML1A8K2U0 1454 aa14.52□□□□□ -0.08
ATG3-203ENST00000465980 FGD6Q6ZV73 1430 aa14.52□□□□□ -0.08
ATG3-203ENST00000465980 TNRQ92752 1358 aa14.52□□□□□ -0.08
ATG3-203ENST00000465980 ABCC3O15438 1527 aa14.51□□□□□ -0.09
ATG3-203ENST00000465980 DUOX2Q9NRD8 1548 aa14.51□□□□□ -0.09
ATG3-203ENST00000465980 SHANK2Q9UPX8 1470 aa14.5□□□□□ -0.09
ATG3-203ENST00000465980 ABCC5O15440 1437 aa14.5□□□□□ -0.09
ATG3-203ENST00000465980 PLA2R1Q13018 1463 aa14.5□□□□□ -0.09
ATG3-203ENST00000465980 DAPK1P53355 1430 aa14.49□□□□□ -0.09
ATG3-203ENST00000465980 KIF15Q9NS87 1388 aa14.49□□□□□ -0.09
ATG3-203ENST00000465980 CABP2Q9NPB3 220 aa14.49□□□□□ -0.09
ATG3-203ENST00000465980 LTBP4Q8N2S1 1624 aa14.48□□□□□ -0.09
ATG3-203ENST00000465980 TCOF1Q13428 1488 aaKnown RBP14.48□□□□□ -0.09
ATG3-203ENST00000465980 RRP7BPQ9NSQ0 103 aa14.47□□□□□ -0.09
ATG3-203ENST00000465980 CHIC2Q9UKJ5 165 aa14.46□□□□□ -0.09
ATG3-203ENST00000465980 NEURL4Q96JN8 1562 aa14.45□□□□□ -0.1
ATG3-203ENST00000465980 PRDM15P57071 1507 aaPredicted RBP14.45□□□□□ -0.1
ATG3-203ENST00000465980 DEPDC5O75140 1603 aa14.44□□□□□ -0.1
ATG3-203ENST00000465980 NLRP1Q9C000 1473 aa14.44□□□□□ -0.1
ATG3-203ENST00000465980 ZNF335Q9H4Z2 1342 aaPredicted RBP14.44□□□□□ -0.1
ATG3-203ENST00000465980 UGGT1Q9NYU2 1555 aa14.44□□□□□ -0.1
ATG3-203ENST00000465980 ERBINQ96RT1 1412 aa14.44□□□□□ -0.1
ATG3-203ENST00000465980 PKD2Q13563 968 aa14.44□□□□□ -0.1
ATG3-203ENST00000465980 FAM50AQ14320 339 aaKnown RBP14.44□□□□□ -0.1
ATG3-203ENST00000465980 ERVK-7P63135 1459 aa14.44□□□□□ -0.1
ATG3-203ENST00000465980 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
ATG3-203ENST00000465980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.42□□□□□ -0.1
ATG3-203ENST00000465980 ANKRD30AQ9BXX3 1397 aa14.41□□□□□ -0.1
ATG3-203ENST00000465980 UBR1Q8IWV7 1749 aa14.41□□□□□ -0.1
ATG3-203ENST00000465980 G3V3G9 751 aa14.39□□□□□ -0.11
ATG3-203ENST00000465980 IQGAP1P46940 1657 aa14.39□□□□□ -0.11
ATG3-203ENST00000465980 DPY19L2Q6NUT2 758 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms