RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 UBR1Q8IWV7 1749 aa12.64□□□□□ -0.39
GARNL3-212ENST00000463005 ERVK-7P63135 1459 aa12.64□□□□□ -0.39
GARNL3-212ENST00000463005 TXNDC2Q86VQ3 553 aa12.63□□□□□ -0.39
GARNL3-212ENST00000463005 SCAF11Q99590 1463 aaKnown RBP12.62□□□□□ -0.39
GARNL3-212ENST00000463005 EID1Q9Y6B2 187 aa12.62□□□□□ -0.39
GARNL3-212ENST00000463005 XIRP1Q702N8 1843 aaKnown RBP12.61□□□□□ -0.39
GARNL3-212ENST00000463005 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
GARNL3-212ENST00000463005 CEP152O94986 1710 aa12.61□□□□□ -0.39
GARNL3-212ENST00000463005 ARHGAP23Q9P227 1491 aa12.6□□□□□ -0.39
GARNL3-212ENST00000463005 LTKP29376 864 aa12.6□□□□□ -0.39
GARNL3-212ENST00000463005 SLIT1O75093 1534 aa12.6□□□□□ -0.39
GARNL3-212ENST00000463005 FAM135BQ49AJ0 1406 aa12.6□□□□□ -0.39
GARNL3-212ENST00000463005 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-212ENST00000463005 ARHGAP31Q2M1Z3 1444 aa12.59□□□□□ -0.39
GARNL3-212ENST00000463005 DUOX2Q9NRD8 1548 aa12.58□□□□□ -0.4
GARNL3-212ENST00000463005 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
GARNL3-212ENST00000463005 MROH1Q8NDA8 1641 aa12.58□□□□□ -0.4
GARNL3-212ENST00000463005 LRRC9Q6ZRR7 1453 aa12.57□□□□□ -0.4
GARNL3-212ENST00000463005 MYOM3Q5VTT5 1437 aa12.56□□□□□ -0.4
GARNL3-212ENST00000463005 KDM5AP29375 1690 aaKnown RBP12.55□□□□□ -0.4
GARNL3-212ENST00000463005 KCNA6P17658 529 aa12.55□□□□□ -0.4
GARNL3-212ENST00000463005 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
GARNL3-212ENST00000463005 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
GARNL3-212ENST00000463005 TMEM2Q9UHN6 1383 aa12.55□□□□□ -0.4
GARNL3-212ENST00000463005 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
GARNL3-212ENST00000463005 PIK3C2BO00750 1634 aa12.53□□□□□ -0.4
GARNL3-212ENST00000463005 PROSER2Q86WR7 435 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-212ENST00000463005 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-212ENST00000463005 CIZ1Q9ULV3 898 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-212ENST00000463005 KANK1Q14678 1352 aa12.53□□□□□ -0.4
GARNL3-212ENST00000463005 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.4
GARNL3-212ENST00000463005 RGL2O15211 777 aa12.52□□□□□ -0.41
GARNL3-212ENST00000463005 POTEAQ6S8J7 498 aa12.52□□□□□ -0.41
GARNL3-212ENST00000463005 TMEM94Q12767 1356 aa12.52□□□□□ -0.41
GARNL3-212ENST00000463005 ERBINQ96RT1 1412 aa12.52□□□□□ -0.41
GARNL3-212ENST00000463005 IDI1Q13907 227 aa12.51□□□□□ -0.41
GARNL3-212ENST00000463005 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-212ENST00000463005 KIF15Q9NS87 1388 aa12.51□□□□□ -0.41
GARNL3-212ENST00000463005 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
GARNL3-212ENST00000463005 RRP7BPQ9NSQ0 103 aa12.5□□□□□ -0.41
GARNL3-212ENST00000463005 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
GARNL3-212ENST00000463005 EFCAB6Q5THR3 1501 aa12.5□□□□□ -0.41
GARNL3-212ENST00000463005 TET3O43151 1660 aa12.5□□□□□ -0.41
GARNL3-212ENST00000463005 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
GARNL3-212ENST00000463005 KANK4Q5T7N3 995 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-212ENST00000463005 HDGFP51858 240 aaKnown RBP12.48□□□□□ -0.41
GARNL3-212ENST00000463005 SLC26A8Q96RN1 970 aa12.48□□□□□ -0.41
GARNL3-212ENST00000463005 SLC52A1Q9NWF4 448 aa12.48□□□□□ -0.41
GARNL3-212ENST00000463005 ABCC5O15440 1437 aa12.47□□□□□ -0.41
GARNL3-212ENST00000463005 MSH6P52701 1360 aa12.47□□□□□ -0.41
GARNL3-212ENST00000463005 PLCB2Q00722 1185 aa12.47□□□□□ -0.41
GARNL3-212ENST00000463005 SLAIN2Q9P270 581 aa12.47□□□□□ -0.41
GARNL3-212ENST00000463005 CROCC2H7BZ55 1655 aa12.47□□□□□ -0.41
GARNL3-212ENST00000463005 LMTK2Q8IWU2 1503 aa12.47□□□□□ -0.41
GARNL3-212ENST00000463005 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.41
GARNL3-212ENST00000463005 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
GARNL3-212ENST00000463005 CHD2O14647 1828 aaKnown RBP12.46□□□□□ -0.42
GARNL3-212ENST00000463005 PHLPP1O60346 1717 aa12.45□□□□□ -0.42
GARNL3-212ENST00000463005 JCADQ9P266 1359 aa12.45□□□□□ -0.42
GARNL3-212ENST00000463005 BCANQ96GW7 911 aa12.45□□□□□ -0.42
GARNL3-212ENST00000463005 NWD1Q149M9 1564 aa12.44□□□□□ -0.42
GARNL3-212ENST00000463005 PRR29P0C7W0 189 aa12.44□□□□□ -0.42
GARNL3-212ENST00000463005 RBM33Q96EV2 1170 aaKnown RBP12.44□□□□□ -0.42
GARNL3-212ENST00000463005 NOS1P29475 1434 aa12.44□□□□□ -0.42
GARNL3-212ENST00000463005 PTPN23Q9H3S7 1636 aa12.44□□□□□ -0.42
GARNL3-212ENST00000463005 ANKRD30AQ9BXX3 1397 aa12.43□□□□□ -0.42
GARNL3-212ENST00000463005 PITPNM1O00562 1244 aa12.43□□□□□ -0.42
GARNL3-212ENST00000463005 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-212ENST00000463005 DAPK1P53355 1430 aa12.43□□□□□ -0.42
GARNL3-212ENST00000463005 NCOA3Q9Y6Q9 1424 aa12.43□□□□□ -0.42
GARNL3-212ENST00000463005 ADGRB3O60242 1522 aa12.42□□□□□ -0.42
GARNL3-212ENST00000463005 SPATA31A6Q5VVP1 1343 aa12.41□□□□□ -0.42
GARNL3-212ENST00000463005 ZNF772Q68DY9 489 aaPredicted RBP12.41□□□□□ -0.42
GARNL3-212ENST00000463005 TBX22Q9Y458 520 aa12.41□□□□□ -0.42
GARNL3-212ENST00000463005 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.42
GARNL3-212ENST00000463005 NUBP1P53384 320 aa12.4□□□□□ -0.42
GARNL3-212ENST00000463005 PLEKHG1Q9ULL1 1385 aa12.4□□□□□ -0.42
GARNL3-212ENST00000463005 RPRD2Q5VT52 1461 aaKnown RBP12.4□□□□□ -0.43
GARNL3-212ENST00000463005 MYO5BQ9ULV0 1848 aa12.39□□□□□ -0.43
GARNL3-212ENST00000463005 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.39□□□□□ -0.43
GARNL3-212ENST00000463005 CHIC2Q9UKJ5 165 aa12.39□□□□□ -0.43
GARNL3-212ENST00000463005 SETD1AO15047 1707 aaKnown RBP12.38□□□□□ -0.43
GARNL3-212ENST00000463005 PPP1R15AO75807 674 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-212ENST00000463005 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-212ENST00000463005 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-212ENST00000463005 CADPS2Q86UW7 1296 aa12.38□□□□□ -0.43
GARNL3-212ENST00000463005 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-212ENST00000463005 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
GARNL3-212ENST00000463005 MEX3CQ5U5Q3 659 aaKnown RBP12.37□□□□□ -0.43
GARNL3-212ENST00000463005 UPF1Q92900 1129 aaKnown RBP eCLIP12.37□□□□□ -0.43
GARNL3-212ENST00000463005 C19orf44Q9H6X5 657 aa12.37□□□□□ -0.43
GARNL3-212ENST00000463005 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
GARNL3-212ENST00000463005 PIK3R4Q99570 1358 aa12.36□□□□□ -0.43
GARNL3-212ENST00000463005 ATF3P18847 181 aa12.36□□□□□ -0.43
GARNL3-212ENST00000463005 C14orf37Q86TY3 774 aa12.36□□□□□ -0.43
GARNL3-212ENST00000463005 RIMS2Q9UQ26 1411 aa12.36□□□□□ -0.43
GARNL3-212ENST00000463005 TMEM131LA2VDJ0 1609 aa12.35□□□□□ -0.43
GARNL3-212ENST00000463005 SHPRHQ149N8 1683 aa12.35□□□□□ -0.43
GARNL3-212ENST00000463005 GCC2Q8IWJ2 1684 aa12.35□□□□□ -0.43
GARNL3-212ENST00000463005 ADGRL2O95490 1459 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms