RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 PCDHB3Q9Y5E6 796 aa12.34□□□□□ -0.43
CFHR3-204ENST00000461558 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
CFHR3-204ENST00000461558 DNAJB2P25686 324 aa12.29□□□□□ -0.44
CFHR3-204ENST00000461558 BLOC1S3Q6QNY0 202 aa12.29□□□□□ -0.44
CFHR3-204ENST00000461558 NUTM2FA1L443 756 aa12.28□□□□□ -0.44
CFHR3-204ENST00000461558 RNF223E7ERA6 249 aa12.28□□□□□ -0.44
CFHR3-204ENST00000461558 SLC19A1P41440 591 aa12.28□□□□□ -0.44
CFHR3-204ENST00000461558 ADGRG1Q9Y653 693 aa12.28□□□□□ -0.44
CFHR3-204ENST00000461558 RBM46Q8TBY0 533 aaKnown RBP12.27□□□□□ -0.45
CFHR3-204ENST00000461558 TMEM134Q9H6X4 195 aa12.26□□□□□ -0.45
CFHR3-204ENST00000461558 TRIM67Q6ZTA4 783 aa12.25□□□□□ -0.45
CFHR3-204ENST00000461558 SEMA3EO15041 775 aa12.24□□□□□ -0.45
CFHR3-204ENST00000461558 TLL1O43897 1013 aa12.23□□□□□ -0.45
CFHR3-204ENST00000461558 PKDCCQ504Y2 493 aa12.23□□□□□ -0.45
CFHR3-204ENST00000461558 ZNF775Q96BV0 537 aaPredicted RBP12.23□□□□□ -0.45
CFHR3-204ENST00000461558 RCCD1A6NED2 376 aa12.22□□□□□ -0.45
CFHR3-204ENST00000461558 FCHSD2O94868 740 aa12.22□□□□□ -0.45
CFHR3-204ENST00000461558 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
CFHR3-204ENST00000461558 KMT5BQ4FZB7 885 aa12.22□□□□□ -0.45
CFHR3-204ENST00000461558 SPRYD7Q5W111 196 aa12.21□□□□□ -0.45
CFHR3-204ENST00000461558 ANKLE1Q8NAG6 615 aa12.21□□□□□ -0.45
CFHR3-204ENST00000461558 EMID1Q96A84 441 aaPredicted RBP12.21□□□□□ -0.45
CFHR3-204ENST00000461558 ZNF598Q86UK7 904 aaKnown RBP12.2□□□□□ -0.46
CFHR3-204ENST00000461558 ACTN4O43707 911 aaKnown RBP12.19□□□□□ -0.46
CFHR3-204ENST00000461558 DGAT1O75907 488 aa12.18□□□□□ -0.46
CFHR3-204ENST00000461558 S1PR4O95977 384 aa12.18□□□□□ -0.46
CFHR3-204ENST00000461558 PRR20EP86478 221 aa12.18□□□□□ -0.46
CFHR3-204ENST00000461558 PRR20CP86479 221 aa12.18□□□□□ -0.46
CFHR3-204ENST00000461558 PRR20DP86480 221 aa12.18□□□□□ -0.46
CFHR3-204ENST00000461558 PRR20BP86481 221 aa12.18□□□□□ -0.46
CFHR3-204ENST00000461558 PRR20AP86496 221 aa12.18□□□□□ -0.46
CFHR3-204ENST00000461558 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
CFHR3-204ENST00000461558 CFHP08603 1231 aa12.17□□□□□ -0.46
CFHR3-204ENST00000461558 MYT1Q01538 1121 aa12.17□□□□□ -0.46
CFHR3-204ENST00000461558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
CFHR3-204ENST00000461558 ZNF697Q5TEC3 545 aa12.16□□□□□ -0.46
CFHR3-204ENST00000461558 LIAT1Q6ZQX7 453 aa12.14□□□□□ -0.47
CFHR3-204ENST00000461558 TESPA1A2RU30 521 aaPredicted RBP12.13□□□□□ -0.47
CFHR3-204ENST00000461558 ADH1BP00325 375 aa12.13□□□□□ -0.47
CFHR3-204ENST00000461558 PLCB2Q00722 1185 aa12.13□□□□□ -0.47
CFHR3-204ENST00000461558 HIC1Q14526 733 aa12.13□□□□□ -0.47
CFHR3-204ENST00000461558 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
CFHR3-204ENST00000461558 OATP04181 439 aa12.12□□□□□ -0.47
CFHR3-204ENST00000461558 SLC10A3P09131 477 aa12.12□□□□□ -0.47
CFHR3-204ENST00000461558 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
CFHR3-204ENST00000461558 NR1I2O75469 434 aa12.11□□□□□ -0.47
CFHR3-204ENST00000461558 TNFRSF10AO00220 468 aa12.1□□□□□ -0.47
CFHR3-204ENST00000461558 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
CFHR3-204ENST00000461558 GDF9O60383 454 aa12.09□□□□□ -0.47
CFHR3-204ENST00000461558 METTL3Q86U44 580 aaKnown RBP12.09□□□□□ -0.47
CFHR3-204ENST00000461558 SLC6A16Q9GZN6 736 aa12.09□□□□□ -0.47
CFHR3-204ENST00000461558 SMYD5Q6GMV2 418 aa12.07□□□□□ -0.48
CFHR3-204ENST00000461558 POTECB2RU33 542 aa12.05□□□□□ -0.48
CFHR3-204ENST00000461558 GNPATO15228 680 aa12.05□□□□□ -0.48
CFHR3-204ENST00000461558 GPR37O15354 613 aa12.04□□□□□ -0.48
CFHR3-204ENST00000461558 PLA2G2CQ5R387 149 aa12.04□□□□□ -0.48
CFHR3-204ENST00000461558 FECHP22830 423 aa12.03□□□□□ -0.48
CFHR3-204ENST00000461558 SCUBE3Q8IX30 993 aa12.03□□□□□ -0.48
CFHR3-204ENST00000461558 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
CFHR3-204ENST00000461558 ST8SIA5O15466 376 aa12□□□□□ -0.49
CFHR3-204ENST00000461558 PUS10Q3MIT2 529 aaKnown RBP12□□□□□ -0.49
CFHR3-204ENST00000461558 SPSB2Q99619 263 aa12□□□□□ -0.49
CFHR3-204ENST00000461558 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
CFHR3-204ENST00000461558 AAASQ9NRG9 546 aa11.99□□□□□ -0.49
CFHR3-204ENST00000461558 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
CFHR3-204ENST00000461558 FOXC1Q12948 553 aa11.98□□□□□ -0.49
CFHR3-204ENST00000461558 RDH13Q8NBN7 331 aa11.96□□□□□ -0.49
CFHR3-204ENST00000461558 PKD2L1Q9P0L9 805 aa11.96□□□□□ -0.49
CFHR3-204ENST00000461558 NLRP7Q8WX94 980 aa11.95□□□□□ -0.5
CFHR3-204ENST00000461558 DDX11L8A8MPP1 907 aa11.93□□□□□ -0.5
CFHR3-204ENST00000461558 RPIAP49247 311 aa11.93□□□□□ -0.5
CFHR3-204ENST00000461558 TREML4Q6UXN2 200 aa11.93□□□□□ -0.5
CFHR3-204ENST00000461558 HAP1P54257 671 aaPredicted RBP11.92□□□□□ -0.5
CFHR3-204ENST00000461558 MORN1Q5T089 497 aa11.92□□□□□ -0.5
CFHR3-204ENST00000461558 GPIHBP1Q8IV16 184 aa11.92□□□□□ -0.5
CFHR3-204ENST00000461558 FUT2Q10981 343 aa11.91□□□□□ -0.5
CFHR3-204ENST00000461558 CRIPAKQ8N1N5 446 aa11.91□□□□□ -0.5
CFHR3-204ENST00000461558 PHOX2BQ99453 314 aa11.91□□□□□ -0.5
CFHR3-204ENST00000461558 FCF1Q9Y324 198 aaKnown RBP11.9□□□□□ -0.5
CFHR3-204ENST00000461558 CD2BP2O95400 341 aaKnown RBP11.89□□□□□ -0.51
CFHR3-204ENST00000461558 LCE2AQ5TA79 106 aaPredicted RBP11.89□□□□□ -0.51
CFHR3-204ENST00000461558 SULF1Q8IWU6 871 aa11.89□□□□□ -0.51
CFHR3-204ENST00000461558 AVPP01185 164 aa11.88□□□□□ -0.51
CFHR3-204ENST00000461558 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
CFHR3-204ENST00000461558 GCGRP47871 477 aa11.88□□□□□ -0.51
CFHR3-204ENST00000461558 CYP4X1Q8N118 509 aa11.88□□□□□ -0.51
CFHR3-204ENST00000461558 TOR4AQ9NXH8 423 aa11.88□□□□□ -0.51
CFHR3-204ENST00000461558 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
CFHR3-204ENST00000461558 THAP11Q96EK4 314 aa11.87□□□□□ -0.51
CFHR3-204ENST00000461558 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
CFHR3-204ENST00000461558 SLC27A5Q9Y2P5 690 aa11.86□□□□□ -0.51
CFHR3-204ENST00000461558 AXIN1O15169 862 aa11.85□□□□□ -0.51
CFHR3-204ENST00000461558 DACH1Q9UI36 760 aa11.85□□□□□ -0.51
CFHR3-204ENST00000461558 CTC1Q2NKJ3 1217 aa11.84□□□□□ -0.51
CFHR3-204ENST00000461558 FAM160A2Q8N612 972 aaPredicted RBP11.83□□□□□ -0.52
CFHR3-204ENST00000461558 GMPR2Q9P2T1 348 aaKnown RBP11.83□□□□□ -0.52
CFHR3-204ENST00000461558 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
CFHR3-204ENST00000461558 C11orf95C9JLR9 678 aaPredicted RBP11.81□□□□□ -0.52
CFHR3-204ENST00000461558 ZBTB24O43167 697 aaPredicted RBP11.81□□□□□ -0.52
CFHR3-204ENST00000461558 PRDM9Q9NQV7 894 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms