RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 ZSWIM6Q9HCJ5 1215 aa11.17□□□□□ -0.62
NUP50-212ENST00000461194 CD109Q6YHK3 1445 aa11.16□□□□□ -0.62
NUP50-212ENST00000461194 MAP3K4Q9Y6R4 1608 aa11.16□□□□□ -0.62
NUP50-212ENST00000461194 TEX14Q8IWB6 1497 aa11.15□□□□□ -0.62
NUP50-212ENST00000461194 PLEKHD1A6NEE1 506 aa11.15□□□□□ -0.62
NUP50-212ENST00000461194 PTGER2P43116 358 aa11.14□□□□□ -0.63
NUP50-212ENST00000461194 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
NUP50-212ENST00000461194 TSPOAP1O95153 1857 aa11.14□□□□□ -0.63
NUP50-212ENST00000461194 MAGI3Q5TCQ9 1506 aa11.14□□□□□ -0.63
NUP50-212ENST00000461194 PPRC1Q5VV67 1664 aaKnown RBP11.14□□□□□ -0.63
NUP50-212ENST00000461194 KDM6BO15054 1643 aa11.13□□□□□ -0.63
NUP50-212ENST00000461194 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
NUP50-212ENST00000461194 TPRNQ4KMQ1 711 aa11.12□□□□□ -0.63
NUP50-212ENST00000461194 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
NUP50-212ENST00000461194 CLIP1P30622 1438 aa11.11□□□□□ -0.63
NUP50-212ENST00000461194 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
NUP50-212ENST00000461194 RBM26Q5T8P6 1007 aaKnown RBP11.11□□□□□ -0.63
NUP50-212ENST00000461194 FAM163AQ96GL9 167 aaPredicted RBP11.11□□□□□ -0.63
NUP50-212ENST00000461194 COL17A1Q9UMD9 1497 aaPredicted RBP11.11□□□□□ -0.63
NUP50-212ENST00000461194 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
NUP50-212ENST00000461194 CFAP43Q8NDM7 1665 aa11.1□□□□□ -0.63
NUP50-212ENST00000461194 OSBPP22059 807 aa11.09□□□□□ -0.63
NUP50-212ENST00000461194 CDK11AQ9UQ88 783 aaPredicted RBP11.09□□□□□ -0.63
NUP50-212ENST00000461194 HECW1Q76N89 1606 aa11.09□□□□□ -0.63
NUP50-212ENST00000461194 CDK13Q14004 1512 aaKnown RBP11.09□□□□□ -0.63
NUP50-212ENST00000461194 LHX6Q9UPM6 363 aa11.08□□□□□ -0.64
NUP50-212ENST00000461194 ABCA9Q8IUA7 1624 aa11.08□□□□□ -0.64
NUP50-212ENST00000461194 CASKIN1Q8WXD9 1431 aa11.08□□□□□ -0.64
NUP50-212ENST00000461194 PHLDB1Q86UU1 1377 aa11.07□□□□□ -0.64
NUP50-212ENST00000461194 ST18O60284 1047 aa11.07□□□□□ -0.64
NUP50-212ENST00000461194 LOC105371045A0A1W2PR82 267 aa11.06□□□□□ -0.64
NUP50-212ENST00000461194 PHF14O94880 888 aa11.06□□□□□ -0.64
NUP50-212ENST00000461194 ZNF454Q8N9F8 522 aa11.06□□□□□ -0.64
NUP50-212ENST00000461194 RBM33Q96EV2 1170 aaKnown RBP11.06□□□□□ -0.64
NUP50-212ENST00000461194 PCDHGA10Q9Y5H3 936 aa11.06□□□□□ -0.64
NUP50-212ENST00000461194 TROQ12816 1431 aaPredicted RBP11.04□□□□□ -0.64
NUP50-212ENST00000461194 CEP162Q5TB80 1403 aa11.04□□□□□ -0.64
NUP50-212ENST00000461194 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
NUP50-212ENST00000461194 PRIM1P49642 420 aaKnown RBP11.04□□□□□ -0.64
NUP50-212ENST00000461194 FOSBP53539 338 aa11.04□□□□□ -0.64
NUP50-212ENST00000461194 EPAS1Q99814 870 aa11.04□□□□□ -0.64
NUP50-212ENST00000461194 NEO1Q92859 1461 aa11.04□□□□□ -0.64
NUP50-212ENST00000461194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.04□□□□□ -0.64
NUP50-212ENST00000461194 ARAP3Q8WWN8 1544 aa11.04□□□□□ -0.64
NUP50-212ENST00000461194 TYW1BQ6NUM6 668 aa11.03□□□□□ -0.64
NUP50-212ENST00000461194 CCDC18Q5T9S5 1454 aa11.03□□□□□ -0.64
NUP50-212ENST00000461194 FYCO1Q9BQS8 1478 aa11.03□□□□□ -0.64
NUP50-212ENST00000461194 PCF11O94913 1555 aaKnown RBP11.03□□□□□ -0.64
NUP50-212ENST00000461194 MARVELD3Q96A59 401 aa11.02□□□□□ -0.65
NUP50-212ENST00000461194 MAP3K7O43318 606 aa11.01□□□□□ -0.65
NUP50-212ENST00000461194 GPIHBP1Q8IV16 184 aa11.01□□□□□ -0.65
NUP50-212ENST00000461194 ZC3H15Q8WU90 426 aaKnown RBP11.01□□□□□ -0.65
NUP50-212ENST00000461194 PLCH2O75038 1416 aa11.01□□□□□ -0.65
NUP50-212ENST00000461194 RAPGEF3O95398 923 aa11□□□□□ -0.65
NUP50-212ENST00000461194 ZDHHC16Q969W1 377 aa11□□□□□ -0.65
NUP50-212ENST00000461194 AKNAQ7Z591 1439 aa11□□□□□ -0.65
NUP50-212ENST00000461194 FANCAO15360 1455 aa11□□□□□ -0.65
NUP50-212ENST00000461194 TTC37Q6PGP7 1564 aa10.99□□□□□ -0.65
NUP50-212ENST00000461194 EMP3P54852 163 aa10.99□□□□□ -0.65
NUP50-212ENST00000461194 FBXW7Q969H0 707 aa10.99□□□□□ -0.65
NUP50-212ENST00000461194 ERBB3P21860 1342 aa10.99□□□□□ -0.65
NUP50-212ENST00000461194 EN1Q05925 392 aaPredicted RBP10.98□□□□□ -0.65
NUP50-212ENST00000461194 PPP4R3BQ5MIZ7 849 aa10.98□□□□□ -0.65
NUP50-212ENST00000461194 EFCAB2Q5VUJ9 269 aa10.98□□□□□ -0.65
NUP50-212ENST00000461194 PSDA5PKW4 1024 aaPredicted RBP10.97□□□□□ -0.65
NUP50-212ENST00000461194 DENND4BO75064 1496 aaPredicted RBP10.97□□□□□ -0.65
NUP50-212ENST00000461194 KIF14Q15058 1648 aa10.97□□□□□ -0.65
NUP50-212ENST00000461194 LRRIQ1Q96JM4 1722 aa10.97□□□□□ -0.65
NUP50-212ENST00000461194 ADAM33Q9BZ11 813 aa10.96□□□□□ -0.65
NUP50-212ENST00000461194 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
NUP50-212ENST00000461194 VARS2Q5ST30 1063 aaKnown RBP10.95□□□□□ -0.66
NUP50-212ENST00000461194 CFAP74Q9C0B2 1584 aa10.94□□□□□ -0.66
NUP50-212ENST00000461194 C6orf132Q5T0Z8 1188 aa10.94□□□□□ -0.66
NUP50-212ENST00000461194 ADGRL1O94910 1474 aa10.93□□□□□ -0.66
NUP50-212ENST00000461194 SCAPERQ9BY12 1400 aa10.93□□□□□ -0.66
NUP50-212ENST00000461194 FAM205CA6NFA0 338 aa10.93□□□□□ -0.66
NUP50-212ENST00000461194 CDHR5Q9HBB8 845 aa10.93□□□□□ -0.66
NUP50-212ENST00000461194 VPS8Q8N3P4 1428 aa10.92□□□□□ -0.66
NUP50-212ENST00000461194 MTUS2Q5JR59 1369 aa10.92□□□□□ -0.66
NUP50-212ENST00000461194 FRMPD1Q5SYB0 1578 aa10.92□□□□□ -0.66
NUP50-212ENST00000461194 FCHSD2O94868 740 aa10.92□□□□□ -0.66
NUP50-212ENST00000461194 ARHGAP5Q13017 1502 aa10.91□□□□□ -0.66
NUP50-212ENST00000461194 ZMYND10O75800 440 aa10.91□□□□□ -0.66
NUP50-212ENST00000461194 LCE2DQ5TA82 110 aaPredicted RBP10.91□□□□□ -0.66
NUP50-212ENST00000461194 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
NUP50-212ENST00000461194 MYO5CQ9NQX4 1742 aa10.9□□□□□ -0.66
NUP50-212ENST00000461194 PTGDRQ13258 359 aa10.9□□□□□ -0.66
NUP50-212ENST00000461194 KRI1Q8N9T8 703 aaKnown RBP10.9□□□□□ -0.66
NUP50-212ENST00000461194 NPDC1Q9NQX5 325 aaPredicted RBP10.9□□□□□ -0.66
NUP50-212ENST00000461194 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
NUP50-212ENST00000461194 MAGI2Q86UL8 1455 aa10.89□□□□□ -0.67
NUP50-212ENST00000461194 BCL2L12Q9HB09 334 aa10.89□□□□□ -0.67
NUP50-212ENST00000461194 ZMYM4Q5VZL5 1548 aa10.89□□□□□ -0.67
NUP50-212ENST00000461194 GPR37O15354 613 aa10.88□□□□□ -0.67
NUP50-212ENST00000461194 RICTORQ6R327 1708 aa10.88□□□□□ -0.67
NUP50-212ENST00000461194 BARGINQ6ZT62 677 aa10.88□□□□□ -0.67
NUP50-212ENST00000461194 AFAP1Q8N556 730 aa10.88□□□□□ -0.67
NUP50-212ENST00000461194 CCNB3Q8WWL7 1395 aa10.88□□□□□ -0.67
NUP50-212ENST00000461194 PTPREP23469 700 aa10.87□□□□□ -0.67
NUP50-212ENST00000461194 CFDP1Q9UEE9 299 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms