RNA–Protein interactions for RNA: ENST00000461015.1

NICN1-205, Transcript of nicolin 1, humanhuman

TSL 4

Gene NICN1, Length 411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-205ENST00000461015 KIF7Q2M1P5 1343 aa11.17□□□□□ -0.62
NICN1-205ENST00000461015 POLR3GLQ9BT43 218 aa11.17□□□□□ -0.62
NICN1-205ENST00000461015 ERVK-7P63135 1459 aa11.17□□□□□ -0.62
NICN1-205ENST00000461015 CFAP65Q6ZU64 1925 aaKnown RBP11.17□□□□□ -0.62
NICN1-205ENST00000461015 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
NICN1-205ENST00000461015 THEMISQ8N1K5 641 aaPredicted RBP11.16□□□□□ -0.62
NICN1-205ENST00000461015 TNRQ92752 1358 aa11.16□□□□□ -0.62
NICN1-205ENST00000461015 EID1Q9Y6B2 187 aa11.15□□□□□ -0.62
NICN1-205ENST00000461015 SCAF11Q99590 1463 aaKnown RBP11.14□□□□□ -0.63
NICN1-205ENST00000461015 CENPBP07199 599 aaPredicted RBP11.14□□□□□ -0.63
NICN1-205ENST00000461015 PUS7Q96PZ0 661 aaKnown RBP11.13□□□□□ -0.63
NICN1-205ENST00000461015 TESK2Q96S53 571 aa11.13□□□□□ -0.63
NICN1-205ENST00000461015 ADGRB3O60242 1522 aa11.13□□□□□ -0.63
NICN1-205ENST00000461015 NRXN1Q9ULB1 1477 aa11.12□□□□□ -0.63
NICN1-205ENST00000461015 BCANQ96GW7 911 aa11.12□□□□□ -0.63
NICN1-205ENST00000461015 UGGT1Q9NYU2 1555 aa11.11□□□□□ -0.63
NICN1-205ENST00000461015 LAMC1P11047 1609 aa11.11□□□□□ -0.63
NICN1-205ENST00000461015 TRPM1Q7Z4N2 1603 aa11.11□□□□□ -0.63
NICN1-205ENST00000461015 SPATA31D1Q6ZQQ2 1576 aa11.11□□□□□ -0.63
NICN1-205ENST00000461015 CENPJQ9HC77 1338 aaPredicted RBP11.1□□□□□ -0.63
NICN1-205ENST00000461015 NUTM2DQ5VT03 806 aaPredicted RBP11.1□□□□□ -0.63
NICN1-205ENST00000461015 TRAK1Q9UPV9 953 aa11.1□□□□□ -0.63
NICN1-205ENST00000461015 NLRP1Q9C000 1473 aa11.1□□□□□ -0.63
NICN1-205ENST00000461015 SYNMO15061 1565 aa11.1□□□□□ -0.63
NICN1-205ENST00000461015 PIK3C2GO75747 1445 aa11.09□□□□□ -0.63
NICN1-205ENST00000461015 PIK3C2BO00750 1634 aa11.09□□□□□ -0.63
NICN1-205ENST00000461015 KIAA1210Q9ULL0 1709 aa11.09□□□□□ -0.63
NICN1-205ENST00000461015 CLTCQ00610 1675 aaKnown RBP11.09□□□□□ -0.63
NICN1-205ENST00000461015 PREX1Q8TCU6 1659 aa11.09□□□□□ -0.63
NICN1-205ENST00000461015 CEBPAP49715 358 aaPredicted RBP11.09□□□□□ -0.63
NICN1-205ENST00000461015 TMEM132EQ6IEE7 984 aa11.09□□□□□ -0.63
NICN1-205ENST00000461015 POGKQ9P215 609 aa11.09□□□□□ -0.63
NICN1-205ENST00000461015 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.64
NICN1-205ENST00000461015 RALBP1Q15311 655 aa11.08□□□□□ -0.64
NICN1-205ENST00000461015 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
NICN1-205ENST00000461015 SIRT1Q96EB6 747 aa11.08□□□□□ -0.64
NICN1-205ENST00000461015 RIMS2Q9UQ26 1411 aa11.08□□□□□ -0.64
NICN1-205ENST00000461015 EVC2Q86UK5 1308 aa11.08□□□□□ -0.64
NICN1-205ENST00000461015 A2ML1A8K2U0 1454 aa11.07□□□□□ -0.64
NICN1-205ENST00000461015 MADDQ8WXG6 1647 aa11.07□□□□□ -0.64
NICN1-205ENST00000461015 PRKRIP1Q9H875 184 aaPredicted RBP11.07□□□□□ -0.64
NICN1-205ENST00000461015 TMEM2Q9UHN6 1383 aa11.06□□□□□ -0.64
NICN1-205ENST00000461015 SBNO2Q9Y2G9 1366 aa11.06□□□□□ -0.64
NICN1-205ENST00000461015 KNSTRNQ9Y448 316 aa11.06□□□□□ -0.64
NICN1-205ENST00000461015 SETBP1Q9Y6X0 1596 aa11.06□□□□□ -0.64
NICN1-205ENST00000461015 TMEM131LA2VDJ0 1609 aa11.06□□□□□ -0.64
NICN1-205ENST00000461015 PLPPR3Q6T4P5 718 aa11.05□□□□□ -0.64
NICN1-205ENST00000461015 SIGLEC1Q9BZZ2 1709 aa11.05□□□□□ -0.64
NICN1-205ENST00000461015 PANK3Q9H999 370 aa11.05□□□□□ -0.64
NICN1-205ENST00000461015 STK26Q9P289 416 aa11.05□□□□□ -0.64
NICN1-205ENST00000461015 MROH2AA6NES4 1674 aa11.04□□□□□ -0.64
NICN1-205ENST00000461015 NEXMIFQ5QGS0 1516 aa11.04□□□□□ -0.64
NICN1-205ENST00000461015 ANKLE2Q86XL3 938 aa11.03□□□□□ -0.64
NICN1-205ENST00000461015 TBX22Q9Y458 520 aa11.03□□□□□ -0.64
NICN1-205ENST00000461015 PPLO60437 1756 aa11.03□□□□□ -0.64
NICN1-205ENST00000461015 ABCC11Q96J66 1382 aa11.03□□□□□ -0.64
NICN1-205ENST00000461015 PER1O15534 1290 aaPredicted RBP11.01□□□□□ -0.65
NICN1-205ENST00000461015 LRPPRCP42704 1394 aaKnown RBP11.01□□□□□ -0.65
NICN1-205ENST00000461015 DISP3Q9P2K9 1392 aa11.01□□□□□ -0.65
NICN1-205ENST00000461015 SETD1BQ9UPS6 1966 aaKnown RBP11□□□□□ -0.65
NICN1-205ENST00000461015 TMC1Q8TDI8 760 aa11□□□□□ -0.65
NICN1-205ENST00000461015 YTHDC1Q96MU7 727 aaKnown RBP11□□□□□ -0.65
NICN1-205ENST00000461015 PRAM1Q96QH2 718 aa11□□□□□ -0.65
NICN1-205ENST00000461015 IFT172Q9UG01 1749 aa11□□□□□ -0.65
NICN1-205ENST00000461015 PLEKHG1Q9ULL1 1385 aa11□□□□□ -0.65
NICN1-205ENST00000461015 YTHDC2Q9H6S0 1430 aaKnown RBP11□□□□□ -0.65
NICN1-205ENST00000461015 KDM5AP29375 1690 aaKnown RBP10.99□□□□□ -0.65
NICN1-205ENST00000461015 LTKP29376 864 aa10.99□□□□□ -0.65
NICN1-205ENST00000461015 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
NICN1-205ENST00000461015 NINLQ9Y2I6 1382 aa10.99□□□□□ -0.65
NICN1-205ENST00000461015 MRS2Q9HD23 443 aa10.98□□□□□ -0.65
NICN1-205ENST00000461015 TERF2IPQ9NYB0 399 aa10.98□□□□□ -0.65
NICN1-205ENST00000461015 MYBBP1AQ9BQG0 1328 aaKnown RBP10.97□□□□□ -0.65
NICN1-205ENST00000461015 ADGRB1O14514 1584 aa10.97□□□□□ -0.65
NICN1-205ENST00000461015 ALKQ9UM73 1620 aa10.97□□□□□ -0.65
NICN1-205ENST00000461015 POLR1AO95602 1720 aaPredicted RBP10.97□□□□□ -0.65
NICN1-205ENST00000461015 IQGAP1P46940 1657 aa10.96□□□□□ -0.65
NICN1-205ENST00000461015 ATAD2Q6PL18 1390 aa10.96□□□□□ -0.65
NICN1-205ENST00000461015 NPC1L1Q9UHC9 1359 aa10.96□□□□□ -0.65
NICN1-205ENST00000461015 SAFB2Q14151 953 aaKnown RBP eCLIP10.96□□□□□ -0.65
NICN1-205ENST00000461015 NLRP13Q86W25 1043 aa10.96□□□□□ -0.65
NICN1-205ENST00000461015 CDK19Q9BWU1 502 aa10.96□□□□□ -0.65
NICN1-205ENST00000461015 SENP3Q9H4L4 574 aaPredicted RBP10.96□□□□□ -0.65
NICN1-205ENST00000461015 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
NICN1-205ENST00000461015 HDGFL2Q7Z4V5 671 aaPredicted RBP10.95□□□□□ -0.66
NICN1-205ENST00000461015 FER1L4A9Z1Z3 1794 aa10.95□□□□□ -0.66
NICN1-205ENST00000461015 FAM135BQ49AJ0 1406 aa10.94□□□□□ -0.66
NICN1-205ENST00000461015 PIK3R4Q99570 1358 aa10.94□□□□□ -0.66
NICN1-205ENST00000461015 CC2D1BQ5T0F9 858 aaKnown RBP10.94□□□□□ -0.66
NICN1-205ENST00000461015 WAPLQ7Z5K2 1190 aa10.94□□□□□ -0.66
NICN1-205ENST00000461015 SLC26A8Q96RN1 970 aa10.94□□□□□ -0.66
NICN1-205ENST00000461015 SLC12A5Q9H2X9 1139 aa10.94□□□□□ -0.66
NICN1-205ENST00000461015 AMOTL2Q9Y2J4 779 aa10.94□□□□□ -0.66
NICN1-205ENST00000461015 ARHGAP23Q9P227 1491 aa10.93□□□□□ -0.66
NICN1-205ENST00000461015 BRD4O60885 1362 aaPredicted RBP10.93□□□□□ -0.66
NICN1-205ENST00000461015 WASLO00401 505 aaPredicted RBP10.93□□□□□ -0.66
NICN1-205ENST00000461015 CNGB1Q14028 1251 aaPredicted RBP10.93□□□□□ -0.66
NICN1-205ENST00000461015 ZNF692Q9BU19 519 aaPredicted RBP10.93□□□□□ -0.66
NICN1-205ENST00000461015 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
NICN1-205ENST00000461015 SLIT1O75093 1534 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms