RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 CCDC173Q0VFZ6 552 aa10.82□□□□□ -0.68
SHROOM4-203ENST00000460112 CT47A1Q5JQC4 288 aaPredicted RBP10.82□□□□□ -0.68
SHROOM4-203ENST00000460112 PDIA4P13667 645 aaKnown RBP10.82□□□□□ -0.68
SHROOM4-203ENST00000460112 DCAF8L1A6NGE4 600 aa10.82□□□□□ -0.68
SHROOM4-203ENST00000460112 VPS37DQ86XT2 251 aa10.82□□□□□ -0.68
SHROOM4-203ENST00000460112 BRMS1Q9HCU9 246 aa10.81□□□□□ -0.68
SHROOM4-203ENST00000460112 R3HCC1Q9Y3T6 440 aaKnown RBP10.81□□□□□ -0.68
SHROOM4-203ENST00000460112 HSPA5P11021 654 aaKnown RBP10.81□□□□□ -0.68
SHROOM4-203ENST00000460112 ARGLU1Q9NWB6 273 aaPredicted RBP10.81□□□□□ -0.68
SHROOM4-203ENST00000460112 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
SHROOM4-203ENST00000460112 TRDNQ13061 729 aa10.81□□□□□ -0.68
SHROOM4-203ENST00000460112 CCAR2Q8N163 923 aaKnown RBP10.81□□□□□ -0.68
SHROOM4-203ENST00000460112 WIZO95785 1651 aa10.8□□□□□ -0.68
SHROOM4-203ENST00000460112 SENP3-EIF4A1A0A087X0R7 540 aa10.8□□□□□ -0.68
SHROOM4-203ENST00000460112 ZRSR2Q15696 482 aaKnown RBP10.8□□□□□ -0.68
SHROOM4-203ENST00000460112 CPLX1O14810 134 aa10.8□□□□□ -0.68
SHROOM4-203ENST00000460112 IL27Q8NEV9 243 aa10.8□□□□□ -0.68
SHROOM4-203ENST00000460112 AEBP2Q6ZN18 517 aaPredicted RBP10.8□□□□□ -0.68
SHROOM4-203ENST00000460112 WWC2Q6AWC2 1192 aa10.79□□□□□ -0.68
SHROOM4-203ENST00000460112 SIN3AQ96ST3 1273 aa10.79□□□□□ -0.68
SHROOM4-203ENST00000460112 RAB3GAP2Q9H2M9 1393 aa10.79□□□□□ -0.68
SHROOM4-203ENST00000460112 NAT10Q9H0A0 1025 aaKnown RBP10.79□□□□□ -0.68
SHROOM4-203ENST00000460112 DDX58O95786 925 aaKnown RBP10.79□□□□□ -0.68
SHROOM4-203ENST00000460112 EPS15P42566 896 aa10.79□□□□□ -0.68
SHROOM4-203ENST00000460112 SAFBQ15424 915 aaKnown RBP eCLIP10.79□□□□□ -0.68
SHROOM4-203ENST00000460112 NINLQ9Y2I6 1382 aa10.78□□□□□ -0.68
SHROOM4-203ENST00000460112 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.78□□□□□ -0.68
SHROOM4-203ENST00000460112 EVA1CP58658 441 aa10.78□□□□□ -0.68
SHROOM4-203ENST00000460112 MCTP1Q6DN14 999 aa10.78□□□□□ -0.68
SHROOM4-203ENST00000460112 COG3Q96JB2 828 aa10.78□□□□□ -0.68
SHROOM4-203ENST00000460112 RAPGEF2Q9Y4G8 1499 aa10.77□□□□□ -0.68
SHROOM4-203ENST00000460112 GSE1Q14687 1217 aa10.77□□□□□ -0.68
SHROOM4-203ENST00000460112 CCDC144AA2RUR9 1427 aa10.77□□□□□ -0.68
SHROOM4-203ENST00000460112 WASHC2CQ9Y4E1 1318 aa10.77□□□□□ -0.69
SHROOM4-203ENST00000460112 MEX3CQ5U5Q3 659 aaKnown RBP10.77□□□□□ -0.69
SHROOM4-203ENST00000460112 XBP1P17861 261 aa10.77□□□□□ -0.69
SHROOM4-203ENST00000460112 CCDC191Q8NCU4 936 aa10.77□□□□□ -0.69
SHROOM4-203ENST00000460112 DHX16O60231 1041 aaKnown RBP10.77□□□□□ -0.69
SHROOM4-203ENST00000460112 ERCC4Q92889 916 aaPredicted RBP10.77□□□□□ -0.69
SHROOM4-203ENST00000460112 EVC2Q86UK5 1308 aa10.76□□□□□ -0.69
SHROOM4-203ENST00000460112 HSP90AB4PQ58FF6 505 aa10.76□□□□□ -0.69
SHROOM4-203ENST00000460112 CCDC66A2RUB6 948 aa10.76□□□□□ -0.69
SHROOM4-203ENST00000460112 CCP110O43303 1012 aa10.76□□□□□ -0.69
SHROOM4-203ENST00000460112 FAM161AQ3B820 660 aa10.76□□□□□ -0.69
SHROOM4-203ENST00000460112 HSP90B2PQ58FF3 399 aa10.76□□□□□ -0.69
SHROOM4-203ENST00000460112 NOL8Q76FK4 1167 aaKnown RBP10.76□□□□□ -0.69
SHROOM4-203ENST00000460112 C9orf78Q9NZ63 289 aaPredicted RBP10.76□□□□□ -0.69
SHROOM4-203ENST00000460112 MIA2Q96PC5 1412 aa10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 PATL2C9JE40 543 aaKnown RBP10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 MYBBP1AQ9BQG0 1328 aaKnown RBP10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 KIF7Q2M1P5 1343 aa10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 SUPT6HQ7KZ85 1726 aaKnown RBP10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 TEFQ10587 303 aa10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 TSHZ2Q9NRE2 1034 aa10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 TXLNBQ8N3L3 684 aa10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 CWC15Q9P013 229 aaKnown RBP10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 CCDC88BA6NC98 1476 aa10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 E9PSI1 815 aa10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 ERC2O15083 957 aa10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 IFIT2P09913 472 aaKnown RBP10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 ANKRD18AQ8IVF6 992 aa10.75□□□□□ -0.69
SHROOM4-203ENST00000460112 RAD21O60216 631 aa10.74□□□□□ -0.69
SHROOM4-203ENST00000460112 NFXL1Q6ZNB6 911 aa10.74□□□□□ -0.69
SHROOM4-203ENST00000460112 RILPL2Q969X0 211 aa10.74□□□□□ -0.69
SHROOM4-203ENST00000460112 CNTLNQ9NXG0 1405 aa10.74□□□□□ -0.69
SHROOM4-203ENST00000460112 HMGB2P26583 209 aaKnown RBP10.74□□□□□ -0.69
SHROOM4-203ENST00000460112 RBM33Q96EV2 1170 aaKnown RBP10.74□□□□□ -0.69
SHROOM4-203ENST00000460112 ZKSCAN2Q63HK3 967 aa10.74□□□□□ -0.69
SHROOM4-203ENST00000460112 HOMER1Q86YM7 354 aa10.74□□□□□ -0.69
SHROOM4-203ENST00000460112 MSH5O43196 834 aa10.74□□□□□ -0.69
SHROOM4-203ENST00000460112 HSP90AB2PQ58FF8 381 aa10.73□□□□□ -0.69
SHROOM4-203ENST00000460112 ANO2Q9NQ90 1003 aa10.73□□□□□ -0.69
SHROOM4-203ENST00000460112 PIP4K2AP48426 406 aaPredicted RBP10.73□□□□□ -0.69
SHROOM4-203ENST00000460112 HMGN5P82970 282 aaKnown RBP10.73□□□□□ -0.69
SHROOM4-203ENST00000460112 FOXD1Q16676 465 aa10.73□□□□□ -0.69
SHROOM4-203ENST00000460112 OLFM4Q6UX06 510 aa10.73□□□□□ -0.69
SHROOM4-203ENST00000460112 DDX49Q9Y6V7 483 aaKnown RBP10.73□□□□□ -0.69
SHROOM4-203ENST00000460112 NAP1L1P55209 391 aaKnown RBP10.73□□□□□ -0.69
SHROOM4-203ENST00000460112 TAF3Q5VWG9 929 aa10.73□□□□□ -0.69
SHROOM4-203ENST00000460112 EFCAB5A4FU69 1503 aa10.73□□□□□ -0.69
SHROOM4-203ENST00000460112 MPHOSPH9Q99550 1183 aa10.72□□□□□ -0.69
SHROOM4-203ENST00000460112 FAM13BQ9NYF5 915 aa10.72□□□□□ -0.69
SHROOM4-203ENST00000460112 DDX19BQ9UMR2 479 aa10.72□□□□□ -0.69
SHROOM4-203ENST00000460112 CAVIN1Q6NZI2 390 aaKnown RBP10.72□□□□□ -0.69
SHROOM4-203ENST00000460112 CCDC73Q6ZRK6 1079 aa10.72□□□□□ -0.69
SHROOM4-203ENST00000460112 SLC3A2P08195 630 aaKnown RBP10.72□□□□□ -0.69
SHROOM4-203ENST00000460112 NUCB2P80303 420 aa10.71□□□□□ -0.69
SHROOM4-203ENST00000460112 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.71□□□□□ -0.69
SHROOM4-203ENST00000460112 SASS6Q6UVJ0 657 aa10.71□□□□□ -0.69
SHROOM4-203ENST00000460112 G3BP1Q13283 466 aaKnown RBP eCLIP10.71□□□□□ -0.7
SHROOM4-203ENST00000460112 SART3Q15020 963 aaKnown RBP10.71□□□□□ -0.7
SHROOM4-203ENST00000460112 BICD2Q8TD16 824 aa10.7□□□□□ -0.7
SHROOM4-203ENST00000460112 VGFO15240 615 aaPredicted RBP10.7□□□□□ -0.7
SHROOM4-203ENST00000460112 OFD1O75665 1012 aa10.7□□□□□ -0.7
SHROOM4-203ENST00000460112 LETM1O95202 739 aaPredicted RBP10.7□□□□□ -0.7
SHROOM4-203ENST00000460112 API5Q9BZZ5 524 aaKnown RBP10.7□□□□□ -0.7
SHROOM4-203ENST00000460112 KIF3BO15066 747 aa10.7□□□□□ -0.7
SHROOM4-203ENST00000460112 MNS1Q8NEH6 495 aa10.7□□□□□ -0.7
SHROOM4-203ENST00000460112 ERLIN2O94905 339 aa10.7□□□□□ -0.7
SHROOM4-203ENST00000460112 MCM2P49736 904 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms