RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 RBM27Q9P2N5 1060 aaKnown RBP8.93□□□□□ -0.98
SSX2IP-204ENST00000459708 V9GY48 417 aaPredicted RBP8.93□□□□□ -0.98
SSX2IP-204ENST00000459708 FECHP22830 423 aa8.92□□□□□ -0.98
SSX2IP-204ENST00000459708 HIC1Q14526 733 aa8.92□□□□□ -0.98
SSX2IP-204ENST00000459708 NUDT18Q6ZVK8 323 aa8.92□□□□□ -0.98
SSX2IP-204ENST00000459708 GNPATO15228 680 aa8.9□□□□□ -0.98
SSX2IP-204ENST00000459708 HDGFP51858 240 aaKnown RBP8.9□□□□□ -0.98
SSX2IP-204ENST00000459708 TTC13Q8NBP0 860 aa8.9□□□□□ -0.98
SSX2IP-204ENST00000459708 NKX2-3Q8TAU0 364 aa8.9□□□□□ -0.98
SSX2IP-204ENST00000459708 ZC3H15Q8WU90 426 aaKnown RBP8.89□□□□□ -0.99
SSX2IP-204ENST00000459708 COPS2P61201 443 aa8.88□□□□□ -0.99
SSX2IP-204ENST00000459708 FAM161AQ3B820 660 aa8.88□□□□□ -0.99
SSX2IP-204ENST00000459708 PDZRN3Q9UPQ7 1066 aa8.88□□□□□ -0.99
SSX2IP-204ENST00000459708 SWT1Q5T5J6 900 aaKnown RBP8.87□□□□□ -0.99
SSX2IP-204ENST00000459708 GGCXP38435 758 aa8.86□□□□□ -0.99
SSX2IP-204ENST00000459708 SLF2Q8IX21 1173 aa8.85□□□□□ -0.99
SSX2IP-204ENST00000459708 NECTIN2Q92692 538 aa8.85□□□□□ -0.99
SSX2IP-204ENST00000459708 ADGRG1Q9Y653 693 aa8.85□□□□□ -0.99
SSX2IP-204ENST00000459708 ZMYND10O75800 440 aa8.83□□□□□ -1
SSX2IP-204ENST00000459708 ZNF787Q6DD87 383 aa8.83□□□□□ -1
SSX2IP-204ENST00000459708 MAP2K5Q13163 448 aa8.82□□□□□ -1
SSX2IP-204ENST00000459708 BARGINQ6ZT62 677 aa8.81□□□□□ -1
SSX2IP-204ENST00000459708 CCDC102AQ96A19 550 aa8.81□□□□□ -1
SSX2IP-204ENST00000459708 ZPR1O75312 459 aa8.8□□□□□ -1
SSX2IP-204ENST00000459708 METTL3Q86U44 580 aaKnown RBP8.8□□□□□ -1
SSX2IP-204ENST00000459708 EYA1Q99502 592 aa8.8□□□□□ -1
SSX2IP-204ENST00000459708 SLC4A3P48751 1232 aa8.79□□□□□ -1
SSX2IP-204ENST00000459708 PXYLP1Q8TE99 480 aa8.79□□□□□ -1
SSX2IP-204ENST00000459708 TMUB1Q9BVT8 246 aa8.79□□□□□ -1
SSX2IP-204ENST00000459708 PCDHB3Q9Y5E6 796 aa8.79□□□□□ -1
SSX2IP-204ENST00000459708 IRF6O14896 467 aa8.78□□□□□ -1
SSX2IP-204ENST00000459708 RBM46Q8TBY0 533 aaKnown RBP8.78□□□□□ -1
SSX2IP-204ENST00000459708 NLRP7Q8WX94 980 aa8.78□□□□□ -1
SSX2IP-204ENST00000459708 PHOX2BQ99453 314 aa8.78□□□□□ -1
SSX2IP-204ENST00000459708 MINK1Q8N4C8 1332 aaPredicted RBP8.77□□□□□ -1.01
SSX2IP-204ENST00000459708 RCCD1A6NED2 376 aa8.76□□□□□ -1.01
SSX2IP-204ENST00000459708 TLL1O43897 1013 aa8.76□□□□□ -1.01
SSX2IP-204ENST00000459708 BLOC1S3Q6QNY0 202 aa8.76□□□□□ -1.01
SSX2IP-204ENST00000459708 PRR14Q9BWN1 585 aa8.76□□□□□ -1.01
SSX2IP-204ENST00000459708 RNF223E7ERA6 249 aa8.75□□□□□ -1.01
SSX2IP-204ENST00000459708 OATP04181 439 aa8.75□□□□□ -1.01
SSX2IP-204ENST00000459708 TPRNQ4KMQ1 711 aa8.75□□□□□ -1.01
SSX2IP-204ENST00000459708 TRIM67Q6ZTA4 783 aa8.75□□□□□ -1.01
SSX2IP-204ENST00000459708 KRI1Q8N9T8 703 aaKnown RBP8.75□□□□□ -1.01
SSX2IP-204ENST00000459708 ZNF775Q96BV0 537 aaPredicted RBP8.75□□□□□ -1.01
SSX2IP-204ENST00000459708 DNAJB2P25686 324 aa8.74□□□□□ -1.01
SSX2IP-204ENST00000459708 SLC19A1P41440 591 aa8.74□□□□□ -1.01
SSX2IP-204ENST00000459708 TMEM134Q9H6X4 195 aa8.74□□□□□ -1.01
SSX2IP-204ENST00000459708 EMID1Q96A84 441 aaPredicted RBP8.73□□□□□ -1.01
SSX2IP-204ENST00000459708 SLC24A3Q9HC58 644 aa8.73□□□□□ -1.01
SSX2IP-204ENST00000459708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.72□□□□□ -1.01
SSX2IP-204ENST00000459708 PKDCCQ504Y2 493 aa8.72□□□□□ -1.01
SSX2IP-204ENST00000459708 SPRYD7Q5W111 196 aa8.71□□□□□ -1.02
SSX2IP-204ENST00000459708 S1PR4O95977 384 aa8.7□□□□□ -1.02
SSX2IP-204ENST00000459708 PPEF1O14829 653 aaPredicted RBP8.69□□□□□ -1.02
SSX2IP-204ENST00000459708 MDM2Q00987 491 aaPredicted RBP8.69□□□□□ -1.02
SSX2IP-204ENST00000459708 MYT1Q01538 1121 aa8.69□□□□□ -1.02
SSX2IP-204ENST00000459708 ANKLE1Q8NAG6 615 aa8.69□□□□□ -1.02
SSX2IP-204ENST00000459708 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
SSX2IP-204ENST00000459708 KMT5BQ4FZB7 885 aa8.68□□□□□ -1.02
SSX2IP-204ENST00000459708 ZNF697Q5TEC3 545 aa8.68□□□□□ -1.02
SSX2IP-204ENST00000459708 ZNF598Q86UK7 904 aaKnown RBP8.68□□□□□ -1.02
SSX2IP-204ENST00000459708 AK7Q96M32 723 aa8.68□□□□□ -1.02
SSX2IP-204ENST00000459708 FAM187AA6NFU0 413 aa8.67□□□□□ -1.02
SSX2IP-204ENST00000459708 TRIM66O15016 1216 aa8.67□□□□□ -1.02
SSX2IP-204ENST00000459708 DGAT1O75907 488 aa8.67□□□□□ -1.02
SSX2IP-204ENST00000459708 CFHP08603 1231 aa8.67□□□□□ -1.02
SSX2IP-204ENST00000459708 PRR20EP86478 221 aa8.67□□□□□ -1.02
SSX2IP-204ENST00000459708 PRR20CP86479 221 aa8.67□□□□□ -1.02
SSX2IP-204ENST00000459708 PRR20DP86480 221 aa8.67□□□□□ -1.02
SSX2IP-204ENST00000459708 PRR20BP86481 221 aa8.67□□□□□ -1.02
SSX2IP-204ENST00000459708 PRR20AP86496 221 aa8.67□□□□□ -1.02
SSX2IP-204ENST00000459708 AMHR2Q16671 573 aa8.67□□□□□ -1.02
SSX2IP-204ENST00000459708 ACTN4O43707 911 aaKnown RBP8.66□□□□□ -1.02
SSX2IP-204ENST00000459708 LIAT1Q6ZQX7 453 aa8.66□□□□□ -1.02
SSX2IP-204ENST00000459708 TNFRSF10AO00220 468 aa8.65□□□□□ -1.02
SSX2IP-204ENST00000459708 REPIN1Q9BWE0 567 aaKnown RBP8.65□□□□□ -1.02
SSX2IP-204ENST00000459708 POTECB2RU33 542 aa8.64□□□□□ -1.03
SSX2IP-204ENST00000459708 ADH1BP00325 375 aa8.64□□□□□ -1.03
SSX2IP-204ENST00000459708 TTLL12Q14166 644 aaPredicted RBP8.64□□□□□ -1.03
SSX2IP-204ENST00000459708 PARP9Q8IXQ6 854 aa8.64□□□□□ -1.03
SSX2IP-204ENST00000459708 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
SSX2IP-204ENST00000459708 SLC10A3P09131 477 aa8.63□□□□□ -1.03
SSX2IP-204ENST00000459708 CLCN1P35523 988 aa8.63□□□□□ -1.03
SSX2IP-204ENST00000459708 GPCPD1Q9NPB8 672 aa8.63□□□□□ -1.03
SSX2IP-204ENST00000459708 DDX11L8A8MPP1 907 aa8.62□□□□□ -1.03
SSX2IP-204ENST00000459708 GDF9O60383 454 aa8.62□□□□□ -1.03
SSX2IP-204ENST00000459708 NR1I2O75469 434 aa8.61□□□□□ -1.03
SSX2IP-204ENST00000459708 PDE4DQ08499 809 aa8.61□□□□□ -1.03
SSX2IP-204ENST00000459708 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
SSX2IP-204ENST00000459708 GIGYF2Q6Y7W6 1299 aaKnown RBP8.61□□□□□ -1.03
SSX2IP-204ENST00000459708 ST8SIA5O15466 376 aa8.6□□□□□ -1.03
SSX2IP-204ENST00000459708 RDH13Q8NBN7 331 aa8.6□□□□□ -1.03
SSX2IP-204ENST00000459708 SLC6A16Q9GZN6 736 aa8.6□□□□□ -1.03
SSX2IP-204ENST00000459708 FAM217BQ9NTX9 383 aaPredicted RBP8.6□□□□□ -1.03
SSX2IP-204ENST00000459708 SULF1Q8IWU6 871 aa8.59□□□□□ -1.03
SSX2IP-204ENST00000459708 CD46P15529 392 aa8.57□□□□□ -1.04
SSX2IP-204ENST00000459708 GPBP1L1Q9HC44 474 aaPredicted RBP8.57□□□□□ -1.04
SSX2IP-204ENST00000459708 AAASQ9NRG9 546 aa8.57□□□□□ -1.04
SSX2IP-204ENST00000459708 PUS10Q3MIT2 529 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms