RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 BMP2KQ9NSY1 1161 aaPredicted RBP9.2□□□□□ -0.94
VPS8-214ENST00000458721 CFDP1Q9UEE9 299 aaPredicted RBP9.2□□□□□ -0.94
VPS8-214ENST00000458721 TRPC6Q9Y210 931 aa9.2□□□□□ -0.94
VPS8-214ENST00000458721 PZPP20742 1482 aa9.2□□□□□ -0.94
VPS8-214ENST00000458721 CCDC141Q6ZP82 1450 aa9.2□□□□□ -0.94
VPS8-214ENST00000458721 NEURL4Q96JN8 1562 aa9.2□□□□□ -0.94
VPS8-214ENST00000458721 PYGBP11216 843 aa9.19□□□□□ -0.94
VPS8-214ENST00000458721 ATN1P54259 1190 aaPredicted RBP9.19□□□□□ -0.94
VPS8-214ENST00000458721 SYNMO15061 1565 aa9.19□□□□□ -0.94
VPS8-214ENST00000458721 ARHGEF5Q12774 1597 aa9.19□□□□□ -0.94
VPS8-214ENST00000458721 EIF2AK4Q9P2K8 1649 aaKnown RBP9.19□□□□□ -0.94
VPS8-214ENST00000458721 C7P10643 843 aa9.18□□□□□ -0.94
VPS8-214ENST00000458721 IFNL1Q8IU54 200 aa9.18□□□□□ -0.94
VPS8-214ENST00000458721 RNF17Q9BXT8 1623 aaKnown RBP9.18□□□□□ -0.94
VPS8-214ENST00000458721 NLRP1Q9C000 1473 aa9.18□□□□□ -0.94
VPS8-214ENST00000458721 DHX29Q7Z478 1369 aaKnown RBP9.17□□□□□ -0.94
VPS8-214ENST00000458721 METRNQ9UJH8 293 aa9.17□□□□□ -0.94
VPS8-214ENST00000458721 ZNF777Q9ULD5 760 aaPredicted RBP9.17□□□□□ -0.94
VPS8-214ENST00000458721 MED14O60244 1454 aa9.16□□□□□ -0.94
VPS8-214ENST00000458721 ZNF335Q9H4Z2 1342 aaPredicted RBP9.16□□□□□ -0.94
VPS8-214ENST00000458721 ILDR2Q71H61 639 aa9.16□□□□□ -0.94
VPS8-214ENST00000458721 MAST1Q9Y2H9 1570 aa9.16□□□□□ -0.94
VPS8-214ENST00000458721 CAMSAP2Q08AD1 1489 aa9.15□□□□□ -0.94
VPS8-214ENST00000458721 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.94
VPS8-214ENST00000458721 HNRNPMP52272 730 aaKnown RBP eCLIP9.15□□□□□ -0.94
VPS8-214ENST00000458721 RSPH4AQ5TD94 716 aa9.15□□□□□ -0.94
VPS8-214ENST00000458721 IQGAP1P46940 1657 aa9.15□□□□□ -0.94
VPS8-214ENST00000458721 TNRQ92752 1358 aa9.14□□□□□ -0.95
VPS8-214ENST00000458721 MED1Q15648 1581 aaPredicted RBP9.14□□□□□ -0.95
VPS8-214ENST00000458721 VWDEQ8N2E2 1590 aa9.14□□□□□ -0.95
VPS8-214ENST00000458721 UGGT1Q9NYU2 1555 aa9.14□□□□□ -0.95
VPS8-214ENST00000458721 SHANK2Q9UPX8 1470 aa9.14□□□□□ -0.95
VPS8-214ENST00000458721 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
VPS8-214ENST00000458721 UBAP1LF5GYI3 381 aa9.13□□□□□ -0.95
VPS8-214ENST00000458721 GGT6Q6P531 493 aa9.13□□□□□ -0.95
VPS8-214ENST00000458721 NCOA2Q15596 1464 aa9.13□□□□□ -0.95
VPS8-214ENST00000458721 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
VPS8-214ENST00000458721 TMEM106CQ9BVX2 250 aa9.11□□□□□ -0.95
VPS8-214ENST00000458721 CIZ1Q9ULV3 898 aaPredicted RBP9.11□□□□□ -0.95
VPS8-214ENST00000458721 ABCC3O15438 1527 aa9.1□□□□□ -0.95
VPS8-214ENST00000458721 KDM5AP29375 1690 aaKnown RBP9.1□□□□□ -0.95
VPS8-214ENST00000458721 ZNF467Q7Z7K2 595 aaPredicted RBP9.1□□□□□ -0.95
VPS8-214ENST00000458721 TRIM35Q9UPQ4 493 aa9.1□□□□□ -0.95
VPS8-214ENST00000458721 MIA2Q96PC5 1412 aa9.1□□□□□ -0.95
VPS8-214ENST00000458721 PRDM15P57071 1507 aaPredicted RBP9.1□□□□□ -0.95
VPS8-214ENST00000458721 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
VPS8-214ENST00000458721 MROH1Q8NDA8 1641 aa9.09□□□□□ -0.95
VPS8-214ENST00000458721 UBR1Q8IWV7 1749 aa9.09□□□□□ -0.95
VPS8-214ENST00000458721 NPHP4O75161 1426 aaPredicted RBP9.09□□□□□ -0.95
VPS8-214ENST00000458721 POTEB2H3BUK9 544 aa9.09□□□□□ -0.95
VPS8-214ENST00000458721 TOM1O60784 492 aa9.09□□□□□ -0.95
VPS8-214ENST00000458721 THEMISQ8N1K5 641 aaPredicted RBP9.09□□□□□ -0.95
VPS8-214ENST00000458721 PCDHB8Q9UN66 801 aa9.09□□□□□ -0.95
VPS8-214ENST00000458721 CROCC2H7BZ55 1655 aa9.09□□□□□ -0.95
VPS8-214ENST00000458721 ALKQ9UM73 1620 aa9.09□□□□□ -0.95
VPS8-214ENST00000458721 IER5LQ5T953 404 aa9.08□□□□□ -0.96
VPS8-214ENST00000458721 ANKLE2Q86XL3 938 aa9.08□□□□□ -0.96
VPS8-214ENST00000458721 ERVK-7P63135 1459 aa9.08□□□□□ -0.96
VPS8-214ENST00000458721 ZNF644Q9H582 1327 aaPredicted RBP9.07□□□□□ -0.96
VPS8-214ENST00000458721 WASHC2CQ9Y4E1 1318 aa9.07□□□□□ -0.96
VPS8-214ENST00000458721 DUOX2Q9NRD8 1548 aa9.07□□□□□ -0.96
VPS8-214ENST00000458721 KIF3BO15066 747 aa9.07□□□□□ -0.96
VPS8-214ENST00000458721 CEP152O94986 1710 aa9.07□□□□□ -0.96
VPS8-214ENST00000458721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.07□□□□□ -0.96
VPS8-214ENST00000458721 STRCP1A6NGW2 1772 aa9.07□□□□□ -0.96
VPS8-214ENST00000458721 SLIT1O75093 1534 aa9.06□□□□□ -0.96
VPS8-214ENST00000458721 LRRC9Q6ZRR7 1453 aa9.06□□□□□ -0.96
VPS8-214ENST00000458721 ARHGAP31Q2M1Z3 1444 aa9.05□□□□□ -0.96
VPS8-214ENST00000458721 SCAF11Q99590 1463 aaKnown RBP9.05□□□□□ -0.96
VPS8-214ENST00000458721 ARHGAP23Q9P227 1491 aa9.05□□□□□ -0.96
VPS8-214ENST00000458721 SEC24BO95487 1268 aa9.05□□□□□ -0.96
VPS8-214ENST00000458721 OTUD5Q96G74 571 aa9.05□□□□□ -0.96
VPS8-214ENST00000458721 LRRC7Q96NW7 1537 aa9.05□□□□□ -0.96
VPS8-214ENST00000458721 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
VPS8-214ENST00000458721 ERBINQ96RT1 1412 aa9.05□□□□□ -0.96
VPS8-214ENST00000458721 TSPY4P0CV99 314 aa9.04□□□□□ -0.96
VPS8-214ENST00000458721 TSPY10P0CW01 314 aa9.04□□□□□ -0.96
VPS8-214ENST00000458721 MYOM3Q5VTT5 1437 aa9.04□□□□□ -0.96
VPS8-214ENST00000458721 HSPA1LP34931 641 aa9.03□□□□□ -0.96
VPS8-214ENST00000458721 FBXO31Q5XUX0 539 aaPredicted RBP9.03□□□□□ -0.96
VPS8-214ENST00000458721 MAMSTRQ6ZN01 415 aa9.03□□□□□ -0.96
VPS8-214ENST00000458721 POTEFA5A3E0 1075 aa9.02□□□□□ -0.97
VPS8-214ENST00000458721 XIRP1Q702N8 1843 aaKnown RBP9.02□□□□□ -0.97
VPS8-214ENST00000458721 LMTK2Q8IWU2 1503 aa9.01□□□□□ -0.97
VPS8-214ENST00000458721 COLQQ9Y215 455 aaPredicted RBP9.01□□□□□ -0.97
VPS8-214ENST00000458721 POTEJP0CG39 1038 aa9□□□□□ -0.97
VPS8-214ENST00000458721 PIP4K2BP78356 416 aa9□□□□□ -0.97
VPS8-214ENST00000458721 PIK3C2BO00750 1634 aa9□□□□□ -0.97
VPS8-214ENST00000458721 NWD1Q149M9 1564 aa8.99□□□□□ -0.97
VPS8-214ENST00000458721 PSEN1P49768 467 aa8.99□□□□□ -0.97
VPS8-214ENST00000458721 SCUBE2Q9NQ36 999 aa8.99□□□□□ -0.97
VPS8-214ENST00000458721 NKTRP30414 1462 aaKnown RBP8.99□□□□□ -0.97
VPS8-214ENST00000458721 EFCAB6Q5THR3 1501 aa8.99□□□□□ -0.97
VPS8-214ENST00000458721 PTPN23Q9H3S7 1636 aa8.98□□□□□ -0.97
VPS8-214ENST00000458721 PLCG2P16885 1265 aa8.98□□□□□ -0.97
VPS8-214ENST00000458721 PDAP1Q13442 181 aaKnown RBP8.98□□□□□ -0.97
VPS8-214ENST00000458721 KIF15Q9NS87 1388 aa8.98□□□□□ -0.97
VPS8-214ENST00000458721 ADGRB3O60242 1522 aa8.97□□□□□ -0.97
VPS8-214ENST00000458721 CFAP65Q6ZU64 1925 aaKnown RBP8.97□□□□□ -0.97
VPS8-214ENST00000458721 KANK1Q14678 1352 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms