RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 IRX2Q9BZI1 471 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P30-201ENST00000457863 HIC1Q14526 733 aa7.14□□□□□ -1.27
HMGB3P30-201ENST00000457863 HAP1P54257 671 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P30-201ENST00000457863 SMYD5Q6GMV2 418 aa7.13□□□□□ -1.27
HMGB3P30-201ENST00000457863 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.12□□□□□ -1.27
HMGB3P30-201ENST00000457863 RCCD1A6NED2 376 aa7.12□□□□□ -1.27
HMGB3P30-201ENST00000457863 GPR37O15354 613 aa7.12□□□□□ -1.27
HMGB3P30-201ENST00000457863 ERICH6Q7L0X2 663 aa7.12□□□□□ -1.27
HMGB3P30-201ENST00000457863 PXYLP1Q8TE99 480 aa7.11□□□□□ -1.27
HMGB3P30-201ENST00000457863 ZNF516Q92618 1163 aa7.11□□□□□ -1.27
HMGB3P30-201ENST00000457863 OATP04181 439 aa7.1□□□□□ -1.27
HMGB3P30-201ENST00000457863 RBM26Q5T8P6 1007 aaKnown RBP7.1□□□□□ -1.27
HMGB3P30-201ENST00000457863 VSIG10Q8N0Z9 540 aa7.1□□□□□ -1.27
HMGB3P30-201ENST00000457863 PCDHB3Q9Y5E6 796 aa7.1□□□□□ -1.27
HMGB3P30-201ENST00000457863 FAM161AQ3B820 660 aa7.09□□□□□ -1.27
HMGB3P30-201ENST00000457863 PPP1R18Q6NYC8 613 aa7.09□□□□□ -1.27
HMGB3P30-201ENST00000457863 METTL3Q86U44 580 aaKnown RBP7.09□□□□□ -1.27
HMGB3P30-201ENST00000457863 GTF3C3Q9Y5Q9 886 aa7.09□□□□□ -1.27
HMGB3P30-201ENST00000457863 GNPATO15228 680 aa7.08□□□□□ -1.28
HMGB3P30-201ENST00000457863 ACTN4O43707 911 aaKnown RBP7.08□□□□□ -1.28
HMGB3P30-201ENST00000457863 ZPR1O75312 459 aa7.08□□□□□ -1.28
HMGB3P30-201ENST00000457863 COPS2P61201 443 aa7.08□□□□□ -1.28
HMGB3P30-201ENST00000457863 KMT5BQ4FZB7 885 aa7.08□□□□□ -1.28
HMGB3P30-201ENST00000457863 KDM2AQ9Y2K7 1162 aa7.08□□□□□ -1.28
HMGB3P30-201ENST00000457863 CFHP08603 1231 aa7.07□□□□□ -1.28
HMGB3P30-201ENST00000457863 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.07□□□□□ -1.28
HMGB3P30-201ENST00000457863 V9GY48 417 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P30-201ENST00000457863 GGCXP38435 758 aa7.06□□□□□ -1.28
HMGB3P30-201ENST00000457863 RANGAP1P46060 587 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P30-201ENST00000457863 LAPTM4AQ15012 233 aa7.06□□□□□ -1.28
HMGB3P30-201ENST00000457863 BLOC1S3Q6QNY0 202 aa7.06□□□□□ -1.28
HMGB3P30-201ENST00000457863 NKX2-3Q8TAU0 364 aa7.06□□□□□ -1.28
HMGB3P30-201ENST00000457863 TMUB1Q9BVT8 246 aa7.06□□□□□ -1.28
HMGB3P30-201ENST00000457863 SLC10A3P09131 477 aa7.05□□□□□ -1.28
HMGB3P30-201ENST00000457863 PRKD2Q9BZL6 878 aa7.05□□□□□ -1.28
HMGB3P30-201ENST00000457863 FECHP22830 423 aa7.04□□□□□ -1.28
HMGB3P30-201ENST00000457863 GPIHBP1Q8IV16 184 aa7.03□□□□□ -1.28
HMGB3P30-201ENST00000457863 TLL1O43897 1013 aa7.02□□□□□ -1.29
HMGB3P30-201ENST00000457863 RSPH4AQ5TD94 716 aa7.01□□□□□ -1.29
HMGB3P30-201ENST00000457863 NR1I2O75469 434 aa7□□□□□ -1.29
HMGB3P30-201ENST00000457863 TTBK1Q5TCY1 1321 aaPredicted RBP7□□□□□ -1.29
HMGB3P30-201ENST00000457863 RNF223E7ERA6 249 aa6.99□□□□□ -1.29
HMGB3P30-201ENST00000457863 NRG2O14511 850 aaPredicted RBP6.99□□□□□ -1.29
HMGB3P30-201ENST00000457863 ADH1BP00325 375 aa6.99□□□□□ -1.29
HMGB3P30-201ENST00000457863 Q6ZNB5 142 aa6.99□□□□□ -1.29
HMGB3P30-201ENST00000457863 ANKLE1Q8NAG6 615 aa6.99□□□□□ -1.29
HMGB3P30-201ENST00000457863 GFRA3O60609 400 aa6.97□□□□□ -1.29
HMGB3P30-201ENST00000457863 SULF1Q8IWU6 871 aa6.97□□□□□ -1.29
HMGB3P30-201ENST00000457863 PHOX2BQ99453 314 aa6.97□□□□□ -1.29
HMGB3P30-201ENST00000457863 S1PR4O95977 384 aa6.96□□□□□ -1.3
HMGB3P30-201ENST00000457863 MAP2K5Q13163 448 aa6.96□□□□□ -1.3
HMGB3P30-201ENST00000457863 DDX11L8A8MPP1 907 aa6.95□□□□□ -1.3
HMGB3P30-201ENST00000457863 SCUBE3Q8IX30 993 aa6.95□□□□□ -1.3
HMGB3P30-201ENST00000457863 RDH13Q8NBN7 331 aa6.95□□□□□ -1.3
HMGB3P30-201ENST00000457863 NLRP7Q8WX94 980 aa6.95□□□□□ -1.3
HMGB3P30-201ENST00000457863 EMID1Q96A84 441 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P30-201ENST00000457863 LCE2BO14633 110 aa6.94□□□□□ -1.3
HMGB3P30-201ENST00000457863 MORN1Q5T089 497 aa6.94□□□□□ -1.3
HMGB3P30-201ENST00000457863 SLC6A16Q9GZN6 736 aa6.94□□□□□ -1.3
HMGB3P30-201ENST00000457863 ATP6V1AP38606 617 aa6.93□□□□□ -1.3
HMGB3P30-201ENST00000457863 SLC19A1P41440 591 aa6.93□□□□□ -1.3
HMGB3P30-201ENST00000457863 GCGRP47871 477 aa6.93□□□□□ -1.3
HMGB3P30-201ENST00000457863 FUT2Q10981 343 aa6.93□□□□□ -1.3
HMGB3P30-201ENST00000457863 PUS10Q3MIT2 529 aaKnown RBP6.93□□□□□ -1.3
HMGB3P30-201ENST00000457863 TMEM132AQ24JP5 1023 aa6.92□□□□□ -1.3
HMGB3P30-201ENST00000457863 SPRYD7Q5W111 196 aa6.92□□□□□ -1.3
HMGB3P30-201ENST00000457863 THAP11Q96EK4 314 aa6.92□□□□□ -1.3
HMGB3P30-201ENST00000457863 SPSB2Q99619 263 aa6.92□□□□□ -1.3
HMGB3P30-201ENST00000457863 PODXL2Q9NZ53 605 aa6.92□□□□□ -1.3
HMGB3P30-201ENST00000457863 PDZRN3Q9UPQ7 1066 aa6.92□□□□□ -1.3
HMGB3P30-201ENST00000457863 SALL2Q9Y467 1007 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P30-201ENST00000457863 PRR20EP86478 221 aa6.91□□□□□ -1.3
HMGB3P30-201ENST00000457863 PRR20CP86479 221 aa6.91□□□□□ -1.3
HMGB3P30-201ENST00000457863 PRR20DP86480 221 aa6.91□□□□□ -1.3
HMGB3P30-201ENST00000457863 PRR20BP86481 221 aa6.91□□□□□ -1.3
HMGB3P30-201ENST00000457863 PRR20AP86496 221 aa6.91□□□□□ -1.3
HMGB3P30-201ENST00000457863 TRIM67Q6ZTA4 783 aa6.91□□□□□ -1.3
HMGB3P30-201ENST00000457863 MINK1Q8N4C8 1332 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P30-201ENST00000457863 PPEF1O14829 653 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P30-201ENST00000457863 IRF6O14896 467 aa6.9□□□□□ -1.3
HMGB3P30-201ENST00000457863 CD46P15529 392 aa6.9□□□□□ -1.3
HMGB3P30-201ENST00000457863 TRAF7Q6Q0C0 670 aa6.9□□□□□ -1.3
HMGB3P30-201ENST00000457863 ZNF598Q86UK7 904 aaKnown RBP6.9□□□□□ -1.3
HMGB3P30-201ENST00000457863 LIAT1Q6ZQX7 453 aa6.89□□□□□ -1.31
HMGB3P30-201ENST00000457863 SLC27A5Q9Y2P5 690 aa6.89□□□□□ -1.31
HMGB3P30-201ENST00000457863 FMNL1O95466 1100 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P30-201ENST00000457863 MYT1Q01538 1121 aa6.88□□□□□ -1.31
HMGB3P30-201ENST00000457863 PLA2G2CQ5R387 149 aa6.88□□□□□ -1.31
HMGB3P30-201ENST00000457863 CCDC102AQ96A19 550 aa6.88□□□□□ -1.31
HMGB3P30-201ENST00000457863 GRIPAP1Q4V328 841 aa6.87□□□□□ -1.31
HMGB3P30-201ENST00000457863 MSS51Q4VC12 460 aa6.87□□□□□ -1.31
HMGB3P30-201ENST00000457863 ZNF697Q5TEC3 545 aa6.87□□□□□ -1.31
HMGB3P30-201ENST00000457863 BRICD5Q6PL45 260 aa6.87□□□□□ -1.31
HMGB3P30-201ENST00000457863 MDM2Q00987 491 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P30-201ENST00000457863 LMOD2Q6P5Q4 547 aa6.86□□□□□ -1.31
HMGB3P30-201ENST00000457863 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.86□□□□□ -1.31
HMGB3P30-201ENST00000457863 FAM160A2Q8N612 972 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P30-201ENST00000457863 GDF9O60383 454 aa6.85□□□□□ -1.31
HMGB3P30-201ENST00000457863 RPIAP49247 311 aa6.85□□□□□ -1.31
HMGB3P30-201ENST00000457863 USP46P62068 366 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms