RNA–Protein interactions for RNA: ENST00000457566.1

RFX3-AS1-203, RFX3 antisense RNA 1, humanhuman

TSL 3

Gene RFX3-AS1, Length 496 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-203ENST00000457566 MTRQ99707 1265 aa7.43□□□□□ -1.22
RFX3-AS1-203ENST00000457566 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.43□□□□□ -1.22
RFX3-AS1-203ENST00000457566 TSR1Q2NL82 804 aaKnown RBP7.42□□□□□ -1.22
RFX3-AS1-203ENST00000457566 ZNF787Q6DD87 383 aa7.42□□□□□ -1.22
RFX3-AS1-203ENST00000457566 KRI1Q8N9T8 703 aaKnown RBP7.42□□□□□ -1.22
RFX3-AS1-203ENST00000457566 CERKQ8TCT0 537 aa7.42□□□□□ -1.22
RFX3-AS1-203ENST00000457566 TRIM66O15016 1216 aa7.41□□□□□ -1.22
RFX3-AS1-203ENST00000457566 FLIIQ13045 1269 aa7.41□□□□□ -1.22
RFX3-AS1-203ENST00000457566 GPIHBP1Q8IV16 184 aa7.41□□□□□ -1.22
RFX3-AS1-203ENST00000457566 CDCA7LQ96GN5 454 aa7.41□□□□□ -1.22
RFX3-AS1-203ENST00000457566 HDGFP51858 240 aaKnown RBP7.4□□□□□ -1.22
RFX3-AS1-203ENST00000457566 PRSS12P56730 875 aa7.4□□□□□ -1.22
RFX3-AS1-203ENST00000457566 PDE4DQ08499 809 aa7.4□□□□□ -1.22
RFX3-AS1-203ENST00000457566 C1orf115Q9H7X2 142 aa7.4□□□□□ -1.22
RFX3-AS1-203ENST00000457566 ZBTB7CA1YPR0 619 aa7.39□□□□□ -1.23
RFX3-AS1-203ENST00000457566 SMAPO00193 183 aa7.39□□□□□ -1.23
RFX3-AS1-203ENST00000457566 PDZRN3Q9UPQ7 1066 aa7.39□□□□□ -1.23
RFX3-AS1-203ENST00000457566 CCDC9Q9Y3X0 531 aaKnown RBP7.39□□□□□ -1.23
RFX3-AS1-203ENST00000457566 NBPF26B4DH59 902 aa7.38□□□□□ -1.23
RFX3-AS1-203ENST00000457566 PDIA4P13667 645 aaKnown RBP7.38□□□□□ -1.23
RFX3-AS1-203ENST00000457566 GGCXP38435 758 aa7.38□□□□□ -1.23
RFX3-AS1-203ENST00000457566 TATDN2Q93075 761 aa7.38□□□□□ -1.23
RFX3-AS1-203ENST00000457566 SPDYE16A6NNV3 312 aaPredicted RBP7.37□□□□□ -1.23
RFX3-AS1-203ENST00000457566 PDIA6Q15084 440 aa7.37□□□□□ -1.23
RFX3-AS1-203ENST00000457566 ZNF516Q92618 1163 aa7.37□□□□□ -1.23
RFX3-AS1-203ENST00000457566 NECTIN2Q92692 538 aa7.37□□□□□ -1.23
RFX3-AS1-203ENST00000457566 ARID3AQ99856 593 aa7.37□□□□□ -1.23
RFX3-AS1-203ENST00000457566 PNMA3Q9UL41 463 aa7.37□□□□□ -1.23
RFX3-AS1-203ENST00000457566 DDRGK1Q96HY6 314 aa7.36□□□□□ -1.23
RFX3-AS1-203ENST00000457566 APBB1O00213 710 aa7.35□□□□□ -1.23
RFX3-AS1-203ENST00000457566 RBM26Q5T8P6 1007 aaKnown RBP7.35□□□□□ -1.23
RFX3-AS1-203ENST00000457566 ZNF775Q96BV0 537 aaPredicted RBP7.35□□□□□ -1.23
RFX3-AS1-203ENST00000457566 TMUB1Q9BVT8 246 aa7.35□□□□□ -1.23
RFX3-AS1-203ENST00000457566 GOPCQ9HD26 462 aa7.35□□□□□ -1.23
RFX3-AS1-203ENST00000457566 FAM198AQ9UFP1 575 aa7.35□□□□□ -1.23
RFX3-AS1-203ENST00000457566 RNF40O75150 1001 aa7.34□□□□□ -1.23
RFX3-AS1-203ENST00000457566 APLP1P51693 650 aa7.34□□□□□ -1.23
RFX3-AS1-203ENST00000457566 A6NJR5 290 aa7.33□□□□□ -1.24
RFX3-AS1-203ENST00000457566 C3orf80F5H4A9 247 aa7.32□□□□□ -1.24
RFX3-AS1-203ENST00000457566 NUDT18Q6ZVK8 323 aa7.32□□□□□ -1.24
RFX3-AS1-203ENST00000457566 NKX2-3Q8TAU0 364 aa7.32□□□□□ -1.24
RFX3-AS1-203ENST00000457566 RBM27Q9P2N5 1060 aaKnown RBP7.32□□□□□ -1.24
RFX3-AS1-203ENST00000457566 FAM117AQ9C073 453 aa7.31□□□□□ -1.24
RFX3-AS1-203ENST00000457566 MINK1Q8N4C8 1332 aaPredicted RBP7.3□□□□□ -1.24
RFX3-AS1-203ENST00000457566 MLLT3P42568 568 aaPredicted RBP7.3□□□□□ -1.24
RFX3-AS1-203ENST00000457566 SLF2Q8IX21 1173 aa7.3□□□□□ -1.24
RFX3-AS1-203ENST00000457566 PLEKHG3A1L390 1219 aa7.29□□□□□ -1.24
RFX3-AS1-203ENST00000457566 SLC4A3P48751 1232 aa7.29□□□□□ -1.24
RFX3-AS1-203ENST00000457566 COPS2P61201 443 aa7.29□□□□□ -1.24
RFX3-AS1-203ENST00000457566 GRXCR2A6NFK2 248 aa7.28□□□□□ -1.24
RFX3-AS1-203ENST00000457566 ARID3CA6NKF2 412 aa7.28□□□□□ -1.24
RFX3-AS1-203ENST00000457566 ZPR1O75312 459 aa7.28□□□□□ -1.24
RFX3-AS1-203ENST00000457566 PRIM1P49642 420 aaKnown RBP7.28□□□□□ -1.24
RFX3-AS1-203ENST00000457566 TRAK2O60296 914 aa7.27□□□□□ -1.25
RFX3-AS1-203ENST00000457566 DGAT1O75907 488 aa7.27□□□□□ -1.25
RFX3-AS1-203ENST00000457566 AMHR2Q16671 573 aa7.27□□□□□ -1.25
RFX3-AS1-203ENST00000457566 PKDCCQ504Y2 493 aa7.27□□□□□ -1.25
RFX3-AS1-203ENST00000457566 PRR14Q9BWN1 585 aa7.27□□□□□ -1.25
RFX3-AS1-203ENST00000457566 GPR37O15354 613 aa7.26□□□□□ -1.25
RFX3-AS1-203ENST00000457566 SLC19A1P41440 591 aa7.26□□□□□ -1.25
RFX3-AS1-203ENST00000457566 SWT1Q5T5J6 900 aaKnown RBP7.26□□□□□ -1.25
RFX3-AS1-203ENST00000457566 TRIM67Q6ZTA4 783 aa7.25□□□□□ -1.25
RFX3-AS1-203ENST00000457566 TRAIPQ9BWF2 469 aa7.25□□□□□ -1.25
RFX3-AS1-203ENST00000457566 CDHR5Q9HBB8 845 aa7.25□□□□□ -1.25
RFX3-AS1-203ENST00000457566 RNF223E7ERA6 249 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 OSBPP22059 807 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 PRR20EP86478 221 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 PRR20CP86479 221 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 PRR20DP86480 221 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 PRR20BP86481 221 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 PRR20AP86496 221 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 MYT1Q01538 1121 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 MAP2K5Q13163 448 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 CCDC82Q8N4S0 544 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 KCTD17Q8N5Z5 321 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 TTC13Q8NBP0 860 aa7.24□□□□□ -1.25
RFX3-AS1-203ENST00000457566 SPRYD7Q5W111 196 aa7.23□□□□□ -1.25
RFX3-AS1-203ENST00000457566 ZNF598Q86UK7 904 aaKnown RBP7.23□□□□□ -1.25
RFX3-AS1-203ENST00000457566 PCDHB3Q9Y5E6 796 aa7.23□□□□□ -1.25
RFX3-AS1-203ENST00000457566 IRF6O14896 467 aa7.21□□□□□ -1.26
RFX3-AS1-203ENST00000457566 PADI6Q6TGC4 694 aa7.21□□□□□ -1.26
RFX3-AS1-203ENST00000457566 PARP9Q8IXQ6 854 aa7.21□□□□□ -1.26
RFX3-AS1-203ENST00000457566 ANKLE1Q8NAG6 615 aa7.21□□□□□ -1.26
RFX3-AS1-203ENST00000457566 CCDC102AQ96A19 550 aa7.2□□□□□ -1.26
RFX3-AS1-203ENST00000457566 EMID1Q96A84 441 aaPredicted RBP7.2□□□□□ -1.26
RFX3-AS1-203ENST00000457566 EYA1Q99502 592 aa7.2□□□□□ -1.26
RFX3-AS1-203ENST00000457566 PCMTD1Q96MG8 357 aaPredicted RBP7.19□□□□□ -1.26
RFX3-AS1-203ENST00000457566 NPDC1Q9NQX5 325 aaPredicted RBP7.19□□□□□ -1.26
RFX3-AS1-203ENST00000457566 SERPINA10Q9UK55 444 aa7.19□□□□□ -1.26
RFX3-AS1-203ENST00000457566 POTECB2RU33 542 aa7.18□□□□□ -1.26
RFX3-AS1-203ENST00000457566 BLOC1S3Q6QNY0 202 aa7.18□□□□□ -1.26
RFX3-AS1-203ENST00000457566 CLUAP1Q96AJ1 413 aa7.18□□□□□ -1.26
RFX3-AS1-203ENST00000457566 FAM187AA6NFU0 413 aa7.17□□□□□ -1.26
RFX3-AS1-203ENST00000457566 ZNF697Q5TEC3 545 aa7.17□□□□□ -1.26
RFX3-AS1-203ENST00000457566 GDF9O60383 454 aa7.16□□□□□ -1.26
RFX3-AS1-203ENST00000457566 MCM6Q14566 821 aa7.16□□□□□ -1.26
RFX3-AS1-203ENST00000457566 TREML4Q6UXN2 200 aa7.16□□□□□ -1.26
RFX3-AS1-203ENST00000457566 LIAT1Q6ZQX7 453 aa7.16□□□□□ -1.26
RFX3-AS1-203ENST00000457566 GNPATO15228 680 aa7.15□□□□□ -1.26
RFX3-AS1-203ENST00000457566 HIC1Q14526 733 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms