RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 SYCP2Q9BX26 1530 aa17.9■□□□□ 0.46
SYT1-204ENST00000457153 SPATA31E1Q6ZUB1 1445 aa17.9■□□□□ 0.46
SYT1-204ENST00000457153 CEP170Q5SW79 1584 aa17.9■□□□□ 0.46
SYT1-204ENST00000457153 RPGRIP1LQ68CZ1 1315 aa17.9■□□□□ 0.46
SYT1-204ENST00000457153 SMC4Q9NTJ3 1288 aa17.89■□□□□ 0.46
SYT1-204ENST00000457153 CFAP44Q96MT7 982 aa17.89■□□□□ 0.45
SYT1-204ENST00000457153 EIF2AK4Q9P2K8 1649 aaKnown RBP17.88■□□□□ 0.45
SYT1-204ENST00000457153 NUTM2DQ5VT03 806 aaPredicted RBP17.88■□□□□ 0.45
SYT1-204ENST00000457153 SCAF11Q99590 1463 aaKnown RBP17.87■□□□□ 0.45
SYT1-204ENST00000457153 KDM6BO15054 1643 aa17.87■□□□□ 0.45
SYT1-204ENST00000457153 CASC1Q6TDU7 716 aa17.86■□□□□ 0.45
SYT1-204ENST00000457153 RRP7AQ9Y3A4 280 aaKnown RBP17.86■□□□□ 0.45
SYT1-204ENST00000457153 ITPRIPQ8IWB1 547 aa17.86■□□□□ 0.45
SYT1-204ENST00000457153 PARD3Q8TEW0 1356 aa17.86■□□□□ 0.45
SYT1-204ENST00000457153 ARHGEF5Q12774 1597 aa17.85■□□□□ 0.45
SYT1-204ENST00000457153 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
SYT1-204ENST00000457153 GOLGA6L22H0YM25 854 aa17.84■□□□□ 0.45
SYT1-204ENST00000457153 LMOD3Q0VAK6 560 aa17.84■□□□□ 0.45
SYT1-204ENST00000457153 NINLQ9Y2I6 1382 aa17.84■□□□□ 0.45
SYT1-204ENST00000457153 MLECQ14165 292 aa17.83■□□□□ 0.45
SYT1-204ENST00000457153 DISP3Q9P2K9 1392 aa17.83■□□□□ 0.45
SYT1-204ENST00000457153 PDE3AQ14432 1141 aa17.83■□□□□ 0.44
SYT1-204ENST00000457153 ADGRL1O94910 1474 aa17.83■□□□□ 0.44
SYT1-204ENST00000457153 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
SYT1-204ENST00000457153 COG6Q9Y2V7 657 aa17.82■□□□□ 0.44
SYT1-204ENST00000457153 ABCC10Q5T3U5 1492 aa17.82■□□□□ 0.44
SYT1-204ENST00000457153 CLUAP1Q96AJ1 413 aa17.82■□□□□ 0.44
SYT1-204ENST00000457153 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
SYT1-204ENST00000457153 ABCA8O94911 1581 aa17.81■□□□□ 0.44
SYT1-204ENST00000457153 BACH2Q9BYV9 841 aa17.8■□□□□ 0.44
SYT1-204ENST00000457153 ABCC2Q92887 1545 aa17.79■□□□□ 0.44
SYT1-204ENST00000457153 FANCAO15360 1455 aa17.79■□□□□ 0.44
SYT1-204ENST00000457153 TMEM132EQ6IEE7 984 aa17.79■□□□□ 0.44
SYT1-204ENST00000457153 SLC52A1Q9NWF4 448 aa17.79■□□□□ 0.44
SYT1-204ENST00000457153 MTHFSP49914 203 aa17.79■□□□□ 0.44
SYT1-204ENST00000457153 RTEL1-TNFRSF6BF6WH68 1400 aa17.78■□□□□ 0.44
SYT1-204ENST00000457153 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
SYT1-204ENST00000457153 SLFN5Q08AF3 891 aa17.78■□□□□ 0.44
SYT1-204ENST00000457153 TCP11L2Q8N4U5 519 aa17.78■□□□□ 0.44
SYT1-204ENST00000457153 TESK2Q96S53 571 aa17.78■□□□□ 0.44
SYT1-204ENST00000457153 MINK1Q8N4C8 1332 aaPredicted RBP17.78■□□□□ 0.44
SYT1-204ENST00000457153 LRPPRCP42704 1394 aaKnown RBP17.77■□□□□ 0.43
SYT1-204ENST00000457153 DDX19BQ9UMR2 479 aa17.77■□□□□ 0.43
SYT1-204ENST00000457153 HSP90AB1P08238 724 aaKnown RBP17.76■□□□□ 0.43
SYT1-204ENST00000457153 GPRASP1Q5JY77 1395 aa17.76■□□□□ 0.43
SYT1-204ENST00000457153 WDR63Q8IWG1 891 aa17.76■□□□□ 0.43
SYT1-204ENST00000457153 DZIP1LQ8IYY4 767 aaKnown RBP17.76■□□□□ 0.43
SYT1-204ENST00000457153 COL17A1Q9UMD9 1497 aaPredicted RBP17.75■□□□□ 0.43
SYT1-204ENST00000457153 SLC12A5Q9H2X9 1139 aa17.75■□□□□ 0.43
SYT1-204ENST00000457153 L1TD1Q5T7N2 865 aaKnown RBP17.74■□□□□ 0.43
SYT1-204ENST00000457153 BCL2L13Q9BXK5 485 aa17.74■□□□□ 0.43
SYT1-204ENST00000457153 INSRP06213 1382 aa17.74■□□□□ 0.43
SYT1-204ENST00000457153 MBD5Q9P267 1494 aa17.74■□□□□ 0.43
SYT1-204ENST00000457153 KDM5BQ9UGL1 1544 aa17.73■□□□□ 0.43
SYT1-204ENST00000457153 PER1O15534 1290 aaPredicted RBP17.73■□□□□ 0.43
SYT1-204ENST00000457153 CT47B1P0C2W7 299 aaPredicted RBP17.73■□□□□ 0.43
SYT1-204ENST00000457153 ADCY10Q96PN6 1610 aa17.73■□□□□ 0.43
SYT1-204ENST00000457153 A2MP01023 1474 aa17.73■□□□□ 0.43
SYT1-204ENST00000457153 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.73■□□□□ 0.43
SYT1-204ENST00000457153 MSH5O43196 834 aa17.72■□□□□ 0.43
SYT1-204ENST00000457153 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
SYT1-204ENST00000457153 C14orf37Q86TY3 774 aa17.72■□□□□ 0.43
SYT1-204ENST00000457153 CABP2Q9NPB3 220 aa17.72■□□□□ 0.43
SYT1-204ENST00000457153 TRAPPC8Q9Y2L5 1435 aa17.72■□□□□ 0.43
SYT1-204ENST00000457153 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.72■□□□□ 0.43
SYT1-204ENST00000457153 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
SYT1-204ENST00000457153 RIPK4P57078 832 aa17.71■□□□□ 0.43
SYT1-204ENST00000457153 CD109Q6YHK3 1445 aa17.71■□□□□ 0.43
SYT1-204ENST00000457153 ARXQ96QS3 562 aa17.71■□□□□ 0.42
SYT1-204ENST00000457153 ADGRF5Q8IZF2 1346 aa17.7■□□□□ 0.42
SYT1-204ENST00000457153 ASXL1Q8IXJ9 1541 aa17.7■□□□□ 0.42
SYT1-204ENST00000457153 NSD3Q9BZ95 1437 aa17.7■□□□□ 0.42
SYT1-204ENST00000457153 KDM5DQ9BY66 1539 aa17.7■□□□□ 0.42
SYT1-204ENST00000457153 COG3Q96JB2 828 aa17.7■□□□□ 0.42
SYT1-204ENST00000457153 RNF123Q5XPI4 1314 aa17.7■□□□□ 0.42
SYT1-204ENST00000457153 KDM5CP41229 1560 aa17.7■□□□□ 0.42
SYT1-204ENST00000457153 MAST1Q9Y2H9 1570 aa17.7■□□□□ 0.42
SYT1-204ENST00000457153 AMER1Q5JTC6 1135 aaPredicted RBP17.69■□□□□ 0.42
SYT1-204ENST00000457153 PANK1Q8TE04 598 aa17.69■□□□□ 0.42
SYT1-204ENST00000457153 DUSP27Q5VZP5 1158 aa17.69■□□□□ 0.42
SYT1-204ENST00000457153 LRRIQ1Q96JM4 1722 aa17.69■□□□□ 0.42
SYT1-204ENST00000457153 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
SYT1-204ENST00000457153 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
SYT1-204ENST00000457153 PTMSP20962 102 aa17.69■□□□□ 0.42
SYT1-204ENST00000457153 DENND4BO75064 1496 aaPredicted RBP17.68■□□□□ 0.42
SYT1-204ENST00000457153 SLKQ9H2G2 1235 aaPredicted RBP17.68■□□□□ 0.42
SYT1-204ENST00000457153 GGNBP2Q9H3C7 697 aa17.68■□□□□ 0.42
SYT1-204ENST00000457153 WDR7Q9Y4E6 1490 aa17.68■□□□□ 0.42
SYT1-204ENST00000457153 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
SYT1-204ENST00000457153 BCAR3O75815 825 aa17.67■□□□□ 0.42
SYT1-204ENST00000457153 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
SYT1-204ENST00000457153 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
SYT1-204ENST00000457153 TRIM44Q96DX7 344 aaPredicted RBP17.66■□□□□ 0.42
SYT1-204ENST00000457153 CYB5RLQ6IPT4 315 aa17.66■□□□□ 0.42
SYT1-204ENST00000457153 C14orf93Q9H972 538 aaKnown RBP17.66■□□□□ 0.42
SYT1-204ENST00000457153 CHMP4AQ9BY43 222 aa17.65■□□□□ 0.42
SYT1-204ENST00000457153 EID1Q9Y6B2 187 aa17.65■□□□□ 0.42
SYT1-204ENST00000457153 PIK3C2GO75747 1445 aa17.65■□□□□ 0.42
SYT1-204ENST00000457153 NPC1L1Q9UHC9 1359 aa17.65■□□□□ 0.42
SYT1-204ENST00000457153 NSD2O96028 1365 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms