RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 DISP3Q9P2K9 1392 aa24.71■■□□□ 1.55
SEMA3B-208ENST00000456210 C8orf34Q49A92 452 aa24.71■■□□□ 1.55
SEMA3B-208ENST00000456210 C20orf194Q5TEA3 1177 aa24.7■■□□□ 1.54
SEMA3B-208ENST00000456210 FRAT1Q92837 279 aaPredicted RBP24.7■■□□□ 1.54
SEMA3B-208ENST00000456210 CCDC144AA2RUR9 1427 aa24.7■■□□□ 1.54
SEMA3B-208ENST00000456210 TESK2Q96S53 571 aa24.7■■□□□ 1.54
SEMA3B-208ENST00000456210 DAXXQ9UER7 740 aaPredicted RBP24.7■■□□□ 1.54
SEMA3B-208ENST00000456210 PPRC1Q5VV67 1664 aaKnown RBP24.69■■□□□ 1.54
SEMA3B-208ENST00000456210 A2MP01023 1474 aa24.69■■□□□ 1.54
SEMA3B-208ENST00000456210 ERBINQ96RT1 1412 aa24.69■■□□□ 1.54
SEMA3B-208ENST00000456210 UNC13BO14795 1591 aa24.68■■□□□ 1.54
SEMA3B-208ENST00000456210 CC2D1BQ5T0F9 858 aaKnown RBP24.67■■□□□ 1.54
SEMA3B-208ENST00000456210 RNF17Q9BXT8 1623 aaKnown RBP24.67■■□□□ 1.54
SEMA3B-208ENST00000456210 FANCAO15360 1455 aa24.66■■□□□ 1.54
SEMA3B-208ENST00000456210 EFCAB2Q5VUJ9 269 aa24.65■■□□□ 1.54
SEMA3B-208ENST00000456210 SLC4A3P48751 1232 aa24.65■■□□□ 1.54
SEMA3B-208ENST00000456210 DUSP27Q5VZP5 1158 aa24.64■■□□□ 1.53
SEMA3B-208ENST00000456210 PANK3Q9H999 370 aa24.64■■□□□ 1.53
SEMA3B-208ENST00000456210 ZNF521Q96K83 1311 aa24.64■■□□□ 1.53
SEMA3B-208ENST00000456210 NBPF1Q3BBV0 1214 aa24.63■■□□□ 1.53
SEMA3B-208ENST00000456210 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.63■■□□□ 1.53
SEMA3B-208ENST00000456210 ARAP3Q8WWN8 1544 aa24.63■■□□□ 1.53
SEMA3B-208ENST00000456210 PLXNC1O60486 1568 aa24.63■■□□□ 1.53
SEMA3B-208ENST00000456210 PLEKHH1Q9ULM0 1364 aa24.62■■□□□ 1.53
SEMA3B-208ENST00000456210 PLA2R1Q13018 1463 aa24.62■■□□□ 1.53
SEMA3B-208ENST00000456210 ABCC1P33527 1531 aa24.61■■□□□ 1.53
SEMA3B-208ENST00000456210 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.6■■□□□ 1.53
SEMA3B-208ENST00000456210 ADAMTS8Q9UP79 889 aa24.6■■□□□ 1.53
SEMA3B-208ENST00000456210 EIF3AQ14152 1382 aaKnown RBP24.59■■□□□ 1.53
SEMA3B-208ENST00000456210 TMF1P82094 1093 aa24.58■■□□□ 1.53
SEMA3B-208ENST00000456210 IQGAP3Q86VI3 1631 aa24.58■■□□□ 1.53
SEMA3B-208ENST00000456210 FRAT2O75474 233 aaPredicted RBP24.55■■□□□ 1.52
SEMA3B-208ENST00000456210 GOLGA2Q08379 1002 aa24.54■■□□□ 1.52
SEMA3B-208ENST00000456210 ATP10AO60312 1499 aa24.54■■□□□ 1.52
SEMA3B-208ENST00000456210 SYNMO15061 1565 aa24.54■■□□□ 1.52
SEMA3B-208ENST00000456210 DUOX2Q9NRD8 1548 aa24.54■■□□□ 1.52
SEMA3B-208ENST00000456210 RAPGEF3O95398 923 aa24.54■■□□□ 1.52
SEMA3B-208ENST00000456210 ADGRL1O94910 1474 aa24.53■■□□□ 1.52
SEMA3B-208ENST00000456210 MAGI2Q86UL8 1455 aa24.53■■□□□ 1.52
SEMA3B-208ENST00000456210 IQGAP1P46940 1657 aa24.53■■□□□ 1.52
SEMA3B-208ENST00000456210 FAM43AQ8N2R8 423 aa24.53■■□□□ 1.52
SEMA3B-208ENST00000456210 AFAP1Q8N556 730 aa24.52■■□□□ 1.52
SEMA3B-208ENST00000456210 SCAPERQ9BY12 1400 aa24.52■■□□□ 1.52
SEMA3B-208ENST00000456210 PIK3C2GO75747 1445 aa24.51■■□□□ 1.51
SEMA3B-208ENST00000456210 PPP2R1AP30153 589 aa24.51■■□□□ 1.51
SEMA3B-208ENST00000456210 UBE2Q2Q8WVN8 375 aa24.51■■□□□ 1.51
SEMA3B-208ENST00000456210 WDR43Q15061 677 aaKnown RBP eCLIP24.5■■□□□ 1.512e-6■□□□□ 9.3
SEMA3B-208ENST00000456210 TRMT2AQ8IZ69 625 aaKnown RBP24.5■■□□□ 1.51
SEMA3B-208ENST00000456210 SLFN5Q08AF3 891 aa24.5■■□□□ 1.51
SEMA3B-208ENST00000456210 TRAPPC8Q9Y2L5 1435 aa24.5■■□□□ 1.51
SEMA3B-208ENST00000456210 NEO1Q92859 1461 aa24.48■■□□□ 1.51
SEMA3B-208ENST00000456210 RGL3Q3MIN7 710 aa24.48■■□□□ 1.51
SEMA3B-208ENST00000456210 NKTRP30414 1462 aaKnown RBP24.48■■□□□ 1.51
SEMA3B-208ENST00000456210 CFAP74Q9C0B2 1584 aa24.47■■□□□ 1.51
SEMA3B-208ENST00000456210 ASXL1Q8IXJ9 1541 aa24.46■■□□□ 1.51
SEMA3B-208ENST00000456210 RGS3P49796 1198 aa24.46■■□□□ 1.51
SEMA3B-208ENST00000456210 USP19O94966 1318 aa24.45■■□□□ 1.5
SEMA3B-208ENST00000456210 RTEL1-TNFRSF6BF6WH68 1400 aa24.44■■□□□ 1.5
SEMA3B-208ENST00000456210 MYOM1P52179 1685 aa24.44■■□□□ 1.5
SEMA3B-208ENST00000456210 AMER1Q5JTC6 1135 aaPredicted RBP24.44■■□□□ 1.5
SEMA3B-208ENST00000456210 MADDQ8WXG6 1647 aa24.44■■□□□ 1.5
SEMA3B-208ENST00000456210 RSPH6AQ9H0K4 717 aa24.44■■□□□ 1.5
SEMA3B-208ENST00000456210 NPC1L1Q9UHC9 1359 aa24.44■■□□□ 1.5
SEMA3B-208ENST00000456210 SPAG9O60271 1321 aaKnown RBP24.43■■□□□ 1.5
SEMA3B-208ENST00000456210 KNSTRNQ9Y448 316 aa24.42■■□□□ 1.5
SEMA3B-208ENST00000456210 ZFYVE16Q7Z3T8 1539 aa24.41■■□□□ 1.5
SEMA3B-208ENST00000456210 NINLQ9Y2I6 1382 aa24.4■■□□□ 1.5
SEMA3B-208ENST00000456210 NLRP1Q9C000 1473 aa24.4■■□□□ 1.5
SEMA3B-208ENST00000456210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.492e-7■■■□□ 16.2
SEMA3B-208ENST00000456210 RICTORQ6R327 1708 aa24.38■■□□□ 1.49
SEMA3B-208ENST00000456210 MAPK8IP3Q9UPT6 1336 aa24.38■■□□□ 1.49
SEMA3B-208ENST00000456210 POGZQ7Z3K3 1410 aa24.38■■□□□ 1.49
SEMA3B-208ENST00000456210 FRMPD1Q5SYB0 1578 aa24.37■■□□□ 1.49
SEMA3B-208ENST00000456210 SPHKAPQ2M3C7 1700 aa24.37■■□□□ 1.49
SEMA3B-208ENST00000456210 CGNL1Q0VF96 1302 aa24.36■■□□□ 1.49
SEMA3B-208ENST00000456210 CDCA8Q53HL2 280 aa24.35■■□□□ 1.49
SEMA3B-208ENST00000456210 BECN1Q14457 450 aa24.34■■□□□ 1.49
SEMA3B-208ENST00000456210 NGEFQ8N5V2 710 aa24.34■■□□□ 1.49
SEMA3B-208ENST00000456210 INO80Q9ULG1 1556 aaPredicted RBP24.34■■□□□ 1.49
SEMA3B-208ENST00000456210 ZMYM3Q14202 1370 aa24.34■■□□□ 1.49
SEMA3B-208ENST00000456210 ATP7AQ04656 1500 aa24.34■■□□□ 1.49
SEMA3B-208ENST00000456210 E9PSI1 815 aa24.34■■□□□ 1.49
SEMA3B-208ENST00000456210 PDE3AQ14432 1141 aa24.34■■□□□ 1.49
SEMA3B-208ENST00000456210 ZNF518AQ6AHZ1 1483 aa24.34■■□□□ 1.49
SEMA3B-208ENST00000456210 IGHDP01880 384 aa24.33■■□□□ 1.49
SEMA3B-208ENST00000456210 SCAF11Q99590 1463 aaKnown RBP24.32■■□□□ 1.48
SEMA3B-208ENST00000456210 SPINK5Q9NQ38 1064 aaPredicted RBP24.32■■□□□ 1.48
SEMA3B-208ENST00000456210 KDM5AP29375 1690 aaKnown RBP24.32■■□□□ 1.48
SEMA3B-208ENST00000456210 BCAR3O75815 825 aa24.31■■□□□ 1.48
SEMA3B-208ENST00000456210 POGKQ9P215 609 aa24.3■■□□□ 1.48
SEMA3B-208ENST00000456210 CEP152O94986 1710 aa24.3■■□□□ 1.48
SEMA3B-208ENST00000456210 EIF5BO60841 1220 aaKnown RBP24.3■■□□□ 1.48
SEMA3B-208ENST00000456210 L1TD1Q5T7N2 865 aaKnown RBP24.3■■□□□ 1.48
SEMA3B-208ENST00000456210 KIDINS220Q9ULH0 1771 aa24.28■■□□□ 1.48
SEMA3B-208ENST00000456210 ANTXR1Q9H6X2 564 aa24.28■■□□□ 1.48
SEMA3B-208ENST00000456210 CLUAP1Q96AJ1 413 aa24.27■■□□□ 1.48
SEMA3B-208ENST00000456210 KIAA1210Q9ULL0 1709 aa24.27■■□□□ 1.48
SEMA3B-208ENST00000456210 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
SEMA3B-208ENST00000456210 APAF1O14727 1248 aa24.26■■□□□ 1.47
SEMA3B-208ENST00000456210 SEC24BO95487 1268 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms