RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 BLMP54132 1417 aaPredicted RBP16.26■□□□□ 0.19
SEMA4D-213ENST00000455551 ADGRF5Q8IZF2 1346 aa16.26■□□□□ 0.19
SEMA4D-213ENST00000455551 AMER1Q5JTC6 1135 aaPredicted RBP16.25■□□□□ 0.19
SEMA4D-213ENST00000455551 CDCA8Q53HL2 280 aa16.25■□□□□ 0.19
SEMA4D-213ENST00000455551 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEMA4D-213ENST00000455551 VWDEQ8N2E2 1590 aa16.24■□□□□ 0.19
SEMA4D-213ENST00000455551 EIF3AQ14152 1382 aaKnown RBP16.23■□□□□ 0.19
SEMA4D-213ENST00000455551 MROH1Q8NDA8 1641 aa16.23■□□□□ 0.19
SEMA4D-213ENST00000455551 STAC3Q96MF2 364 aa16.22■□□□□ 0.19
SEMA4D-213ENST00000455551 NPM1P06748 294 aaKnown RBP eCLIP16.21■□□□□ 0.18
SEMA4D-213ENST00000455551 GGT6Q6P531 493 aa16.21■□□□□ 0.18
SEMA4D-213ENST00000455551 CFAP65Q6ZU64 1925 aaKnown RBP16.2■□□□□ 0.18
SEMA4D-213ENST00000455551 SYNMO15061 1565 aa16.2■□□□□ 0.18
SEMA4D-213ENST00000455551 KIDINS220Q9ULH0 1771 aa16.19■□□□□ 0.18
SEMA4D-213ENST00000455551 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
SEMA4D-213ENST00000455551 ABCA6Q8N139 1617 aa16.18■□□□□ 0.18
SEMA4D-213ENST00000455551 CCDC146Q8IYE0 955 aa16.18■□□□□ 0.18
SEMA4D-213ENST00000455551 EFCAB6Q5THR3 1501 aa16.18■□□□□ 0.18
SEMA4D-213ENST00000455551 ZMYM4Q5VZL5 1548 aa16.18■□□□□ 0.18
SEMA4D-213ENST00000455551 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
SEMA4D-213ENST00000455551 MYOM1P52179 1685 aa16.17■□□□□ 0.18
SEMA4D-213ENST00000455551 PPRC1Q5VV67 1664 aaKnown RBP16.17■□□□□ 0.18
SEMA4D-213ENST00000455551 MAP3K4Q9Y6R4 1608 aa16.17■□□□□ 0.18
SEMA4D-213ENST00000455551 KIF1BO60333 1816 aa16.17■□□□□ 0.18
SEMA4D-213ENST00000455551 INSRP06213 1382 aa16.16■□□□□ 0.18
SEMA4D-213ENST00000455551 MROH2AA6NES4 1674 aa16.16■□□□□ 0.18
SEMA4D-213ENST00000455551 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
SEMA4D-213ENST00000455551 CRBNQ96SW2 442 aa16.16■□□□□ 0.18
SEMA4D-213ENST00000455551 NOS1P29475 1434 aa16.16■□□□□ 0.18
SEMA4D-213ENST00000455551 KDM5AP29375 1690 aaKnown RBP16.16■□□□□ 0.18
SEMA4D-213ENST00000455551 ERVK-7P63135 1459 aa16.15■□□□□ 0.18
SEMA4D-213ENST00000455551 TRAK1Q9UPV9 953 aa16.15■□□□□ 0.18
SEMA4D-213ENST00000455551 MYOM2P54296 1465 aa16.14■□□□□ 0.18
SEMA4D-213ENST00000455551 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
SEMA4D-213ENST00000455551 CD109Q6YHK3 1445 aa16.14■□□□□ 0.17
SEMA4D-213ENST00000455551 KIAA1210Q9ULL0 1709 aa16.14■□□□□ 0.17
SEMA4D-213ENST00000455551 CARD14Q9BXL6 1004 aa16.13■□□□□ 0.17
SEMA4D-213ENST00000455551 NUTM2DQ5VT03 806 aaPredicted RBP16.13■□□□□ 0.17
SEMA4D-213ENST00000455551 SKAP1Q86WV1 359 aa16.13■□□□□ 0.17
SEMA4D-213ENST00000455551 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
SEMA4D-213ENST00000455551 TMEM132EQ6IEE7 984 aa16.12■□□□□ 0.17
SEMA4D-213ENST00000455551 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
SEMA4D-213ENST00000455551 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
SEMA4D-213ENST00000455551 ANP32AP39687 249 aaKnown RBP16.11■□□□□ 0.17
SEMA4D-213ENST00000455551 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
SEMA4D-213ENST00000455551 PIK3C2GO75747 1445 aa16.11■□□□□ 0.17
SEMA4D-213ENST00000455551 NPATQ14207 1427 aa16.11■□□□□ 0.17
SEMA4D-213ENST00000455551 DUSP27Q5VZP5 1158 aa16.11■□□□□ 0.17
SEMA4D-213ENST00000455551 GOLGA2Q08379 1002 aa16.11■□□□□ 0.17
SEMA4D-213ENST00000455551 RAPGEF3O95398 923 aa16.1■□□□□ 0.17
SEMA4D-213ENST00000455551 NPM2Q86SE8 214 aaKnown RBP16.1■□□□□ 0.17
SEMA4D-213ENST00000455551 CENPJQ9HC77 1338 aaPredicted RBP16.1■□□□□ 0.17
SEMA4D-213ENST00000455551 POGZQ7Z3K3 1410 aa16.1■□□□□ 0.17
SEMA4D-213ENST00000455551 APAF1O14727 1248 aa16.1■□□□□ 0.17
SEMA4D-213ENST00000455551 TNNT2P45379 298 aaPredicted RBP16.1■□□□□ 0.17
SEMA4D-213ENST00000455551 IFT172Q9UG01 1749 aa16.09■□□□□ 0.17
SEMA4D-213ENST00000455551 NEURL4Q96JN8 1562 aa16.09■□□□□ 0.17
SEMA4D-213ENST00000455551 NPC1L1Q9UHC9 1359 aa16.08■□□□□ 0.17
SEMA4D-213ENST00000455551 FRMPD1Q5SYB0 1578 aa16.08■□□□□ 0.16
SEMA4D-213ENST00000455551 ZNF521Q96K83 1311 aa16.08■□□□□ 0.16
SEMA4D-213ENST00000455551 ADGRB3O60242 1522 aa16.08■□□□□ 0.16
SEMA4D-213ENST00000455551 LMTK2Q8IWU2 1503 aa16.07■□□□□ 0.16
SEMA4D-213ENST00000455551 TCERG1O14776 1098 aaKnown RBP16.07■□□□□ 0.16
SEMA4D-213ENST00000455551 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
SEMA4D-213ENST00000455551 SLC12A5Q9H2X9 1139 aa16.06■□□□□ 0.16
SEMA4D-213ENST00000455551 NRXN1Q9ULB1 1477 aa16.06■□□□□ 0.16
SEMA4D-213ENST00000455551 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
SEMA4D-213ENST00000455551 PDE4AP27815 886 aa16.05■□□□□ 0.16
SEMA4D-213ENST00000455551 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
SEMA4D-213ENST00000455551 IPO9Q96P70 1041 aaKnown RBP16.05■□□□□ 0.16
SEMA4D-213ENST00000455551 HECW2Q9P2P5 1572 aa16.04■□□□□ 0.16
SEMA4D-213ENST00000455551 C14orf93Q9H972 538 aaKnown RBP16.04■□□□□ 0.16
SEMA4D-213ENST00000455551 NSD3Q9BZ95 1437 aa16.04■□□□□ 0.16
SEMA4D-213ENST00000455551 MLH3Q9UHC1 1453 aa16.04■□□□□ 0.16
SEMA4D-213ENST00000455551 NBR1Q14596 966 aa16.03■□□□□ 0.16
SEMA4D-213ENST00000455551 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
SEMA4D-213ENST00000455551 MORC1Q86VD1 984 aa16.03■□□□□ 0.16
SEMA4D-213ENST00000455551 SAFB2Q14151 953 aaKnown RBP eCLIP16.02■□□□□ 0.16
SEMA4D-213ENST00000455551 ABCC3O15438 1527 aa16.02■□□□□ 0.15
SEMA4D-213ENST00000455551 SBNO2Q9Y2G9 1366 aa16.01■□□□□ 0.15
SEMA4D-213ENST00000455551 CFAP74Q9C0B2 1584 aa16.01■□□□□ 0.15
SEMA4D-213ENST00000455551 PPLO60437 1756 aa16.01■□□□□ 0.15
SEMA4D-213ENST00000455551 NEUROD2Q15784 382 aa16.01■□□□□ 0.15
SEMA4D-213ENST00000455551 MYO3AQ8NEV4 1616 aa16.01■□□□□ 0.15
SEMA4D-213ENST00000455551 ZBTB47Q9UFB7 747 aaPredicted RBP16.01■□□□□ 0.15
SEMA4D-213ENST00000455551 QRICH2Q9H0J4 1663 aa15.99■□□□□ 0.15
SEMA4D-213ENST00000455551 BCAR3O75815 825 aa15.99■□□□□ 0.15
SEMA4D-213ENST00000455551 BACH2Q9BYV9 841 aa15.99■□□□□ 0.15
SEMA4D-213ENST00000455551 SETBP1Q9Y6X0 1596 aa15.99■□□□□ 0.15
SEMA4D-213ENST00000455551 RRP7AQ9Y3A4 280 aaKnown RBP15.99■□□□□ 0.15
SEMA4D-213ENST00000455551 ADGRB1O14514 1584 aa15.99■□□□□ 0.15
SEMA4D-213ENST00000455551 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.98■□□□□ 0.15
SEMA4D-213ENST00000455551 SIGLEC1Q9BZZ2 1709 aa15.97■□□□□ 0.15
SEMA4D-213ENST00000455551 MS4A1P11836 297 aa15.97■□□□□ 0.15
SEMA4D-213ENST00000455551 TRMT2AQ8IZ69 625 aaKnown RBP15.97■□□□□ 0.15
SEMA4D-213ENST00000455551 STK26Q9P289 416 aa15.97■□□□□ 0.15
SEMA4D-213ENST00000455551 E9PSI1 815 aa15.96■□□□□ 0.15
SEMA4D-213ENST00000455551 RPGRIP1LQ68CZ1 1315 aa15.96■□□□□ 0.15
SEMA4D-213ENST00000455551 CAMSAP1Q5T5Y3 1602 aa15.96■□□□□ 0.15
SEMA4D-213ENST00000455551 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms