RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 TROQ12816 1431 aaPredicted RBP12.36□□□□□ -0.43
LINC01940-201ENST00000455228 YY1AP1Q9H869 796 aa12.35□□□□□ -0.43
LINC01940-201ENST00000455228 AXDND1Q5T1B0 1012 aaPredicted RBP12.35□□□□□ -0.43
LINC01940-201ENST00000455228 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
LINC01940-201ENST00000455228 ADAMTS12P58397 1594 aa12.35□□□□□ -0.43
LINC01940-201ENST00000455228 CC2D1BQ5T0F9 858 aaKnown RBP12.35□□□□□ -0.43
LINC01940-201ENST00000455228 UHRF1BP1Q6BDS2 1440 aa12.34□□□□□ -0.43
LINC01940-201ENST00000455228 LETM1O95202 739 aaPredicted RBP12.34□□□□□ -0.43
LINC01940-201ENST00000455228 RGL3Q3MIN7 710 aa12.33□□□□□ -0.44
LINC01940-201ENST00000455228 CNPY4Q8N129 248 aa12.33□□□□□ -0.44
LINC01940-201ENST00000455228 ZNF622Q969S3 477 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC01940-201ENST00000455228 GPATCH8Q9UKJ3 1502 aaKnown RBP12.33□□□□□ -0.44
LINC01940-201ENST00000455228 RAPGEF6Q8TEU7 1601 aa12.32□□□□□ -0.44
LINC01940-201ENST00000455228 KIAA0586Q9BVV6 1533 aa12.32□□□□□ -0.44
LINC01940-201ENST00000455228 PLEKHD1A6NEE1 506 aa12.32□□□□□ -0.44
LINC01940-201ENST00000455228 GOLGA6L3A6NEY3 463 aa12.32□□□□□ -0.44
LINC01940-201ENST00000455228 CRBNQ96SW2 442 aa12.32□□□□□ -0.44
LINC01940-201ENST00000455228 KIAA0556O60303 1618 aa12.31□□□□□ -0.44
LINC01940-201ENST00000455228 DISP1Q96F81 1524 aa12.31□□□□□ -0.44
LINC01940-201ENST00000455228 MCCP23508 829 aa12.31□□□□□ -0.44
LINC01940-201ENST00000455228 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
LINC01940-201ENST00000455228 FBLN2P98095 1184 aa12.31□□□□□ -0.44
LINC01940-201ENST00000455228 ADGBQ8N7X0 1667 aa12.3□□□□□ -0.44
LINC01940-201ENST00000455228 ADGRL2O95490 1459 aa12.3□□□□□ -0.44
LINC01940-201ENST00000455228 RIPK4P57078 832 aa12.3□□□□□ -0.44
LINC01940-201ENST00000455228 SKAP1Q86WV1 359 aa12.3□□□□□ -0.44
LINC01940-201ENST00000455228 TPRNQ4KMQ1 711 aa12.3□□□□□ -0.44
LINC01940-201ENST00000455228 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
LINC01940-201ENST00000455228 ARHGEF12Q9NZN5 1544 aa12.29□□□□□ -0.44
LINC01940-201ENST00000455228 SLC52A1Q9NWF4 448 aa12.29□□□□□ -0.44
LINC01940-201ENST00000455228 PARD3Q8TEW0 1356 aa12.28□□□□□ -0.44
LINC01940-201ENST00000455228 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
LINC01940-201ENST00000455228 CHMP7Q8WUX9 453 aaPredicted RBP12.28□□□□□ -0.44
LINC01940-201ENST00000455228 PLB1Q6P1J6 1458 aa12.27□□□□□ -0.44
LINC01940-201ENST00000455228 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC01940-201ENST00000455228 NBPF1Q3BBV0 1214 aa12.27□□□□□ -0.45
LINC01940-201ENST00000455228 PANK3Q9H999 370 aa12.27□□□□□ -0.45
LINC01940-201ENST00000455228 GEMIN8Q9NWZ8 242 aaKnown RBP12.27□□□□□ -0.45
LINC01940-201ENST00000455228 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
LINC01940-201ENST00000455228 CFAP65Q6ZU64 1925 aaKnown RBP12.26□□□□□ -0.45
LINC01940-201ENST00000455228 CEP120Q8N960 986 aa12.26□□□□□ -0.45
LINC01940-201ENST00000455228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.26□□□□□ -0.45
LINC01940-201ENST00000455228 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
LINC01940-201ENST00000455228 HMGB1P09429 215 aaKnown RBP12.25□□□□□ -0.45
LINC01940-201ENST00000455228 CCDC144AA2RUR9 1427 aa12.25□□□□□ -0.45
LINC01940-201ENST00000455228 PHF14O94880 888 aa12.25□□□□□ -0.45
LINC01940-201ENST00000455228 PTMAP06454 111 aaKnown RBP12.25□□□□□ -0.45
LINC01940-201ENST00000455228 WDR43Q15061 677 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC01940-201ENST00000455228 ZNF608Q9ULD9 1512 aaPredicted RBP12.25□□□□□ -0.45
LINC01940-201ENST00000455228 TMF1P82094 1093 aa12.24□□□□□ -0.45
LINC01940-201ENST00000455228 KCNA4P22459 653 aa12.24□□□□□ -0.45
LINC01940-201ENST00000455228 SOX12O15370 315 aa12.23□□□□□ -0.45
LINC01940-201ENST00000455228 C20orf194Q5TEA3 1177 aa12.23□□□□□ -0.45
LINC01940-201ENST00000455228 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.23□□□□□ -0.45
LINC01940-201ENST00000455228 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.23□□□□□ -0.45
LINC01940-201ENST00000455228 MRC2Q9UBG0 1479 aa12.23□□□□□ -0.45
LINC01940-201ENST00000455228 CARMIL2Q6F5E8 1435 aa12.23□□□□□ -0.45
LINC01940-201ENST00000455228 CENPQQ7L2Z9 268 aaPredicted RBP12.23□□□□□ -0.45
LINC01940-201ENST00000455228 ISY1Q9ULR0 285 aaKnown RBP12.23□□□□□ -0.45
LINC01940-201ENST00000455228 GRIN2AQ12879 1464 aa12.22□□□□□ -0.45
LINC01940-201ENST00000455228 ADAMTS8Q9UP79 889 aa12.22□□□□□ -0.45
LINC01940-201ENST00000455228 CROCC2H7BZ55 1655 aa12.22□□□□□ -0.45
LINC01940-201ENST00000455228 TRIM44Q96DX7 344 aaPredicted RBP12.22□□□□□ -0.45
LINC01940-201ENST00000455228 ZHX1Q9UKY1 873 aaPredicted RBP12.21□□□□□ -0.45
LINC01940-201ENST00000455228 CLSTN1O94985 981 aa12.21□□□□□ -0.45
LINC01940-201ENST00000455228 IFT140Q96RY7 1462 aa12.21□□□□□ -0.46
LINC01940-201ENST00000455228 FAM161AQ3B820 660 aa12.21□□□□□ -0.46
LINC01940-201ENST00000455228 JPH4Q96JJ6 628 aa12.21□□□□□ -0.46
LINC01940-201ENST00000455228 KNSTRNQ9Y448 316 aa12.21□□□□□ -0.46
LINC01940-201ENST00000455228 OFD1O75665 1012 aa12.2□□□□□ -0.46
LINC01940-201ENST00000455228 CCDC94Q9BW85 323 aaPredicted RBP12.2□□□□□ -0.46
LINC01940-201ENST00000455228 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
LINC01940-201ENST00000455228 ESPNB1AK53 854 aa12.2□□□□□ -0.46
LINC01940-201ENST00000455228 PLCD3Q8N3E9 789 aa12.2□□□□□ -0.46
LINC01940-201ENST00000455228 CARD10Q9BWT7 1032 aa12.2□□□□□ -0.46
LINC01940-201ENST00000455228 HDAC5Q9UQL6 1122 aa12.2□□□□□ -0.46
LINC01940-201ENST00000455228 SHANK2Q9UPX8 1470 aa12.19□□□□□ -0.46
LINC01940-201ENST00000455228 DISP3Q9P2K9 1392 aa12.19□□□□□ -0.46
LINC01940-201ENST00000455228 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC01940-201ENST00000455228 ERBB4Q15303 1308 aa12.19□□□□□ -0.46
LINC01940-201ENST00000455228 BLMP54132 1417 aaPredicted RBP12.19□□□□□ -0.46
LINC01940-201ENST00000455228 E9PCH4 1651 aa12.19□□□□□ -0.46
LINC01940-201ENST00000455228 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
LINC01940-201ENST00000455228 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
LINC01940-201ENST00000455228 PLEKHH2Q8IVE3 1493 aa12.18□□□□□ -0.46
LINC01940-201ENST00000455228 TESK2Q96S53 571 aa12.18□□□□□ -0.46
LINC01940-201ENST00000455228 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
LINC01940-201ENST00000455228 FAM193AP78312 1265 aa12.17□□□□□ -0.46
LINC01940-201ENST00000455228 DNAJC2Q99543 621 aaKnown RBP12.17□□□□□ -0.46
LINC01940-201ENST00000455228 ERBINQ96RT1 1412 aa12.17□□□□□ -0.46
LINC01940-201ENST00000455228 MAGI1Q96QZ7 1491 aaPredicted RBP12.17□□□□□ -0.46
LINC01940-201ENST00000455228 SCAPERQ9BY12 1400 aa12.17□□□□□ -0.46
LINC01940-201ENST00000455228 INSRP06213 1382 aa12.16□□□□□ -0.46
LINC01940-201ENST00000455228 KDM2BQ8NHM5 1336 aa12.16□□□□□ -0.46
LINC01940-201ENST00000455228 ADCY10Q96PN6 1610 aa12.16□□□□□ -0.46
LINC01940-201ENST00000455228 KDM5DQ9BY66 1539 aa12.16□□□□□ -0.46
LINC01940-201ENST00000455228 COL17A1Q9UMD9 1497 aaPredicted RBP12.16□□□□□ -0.46
LINC01940-201ENST00000455228 NBPF20Q3BBV1 942 aa12.16□□□□□ -0.46
LINC01940-201ENST00000455228 CCDC9Q9Y3X0 531 aaKnown RBP12.16□□□□□ -0.46
LINC01940-201ENST00000455228 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms