RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ASXL2Q76L83 1435 aa15.65■□□□□ 0.1
SMPD4-213ENST00000454468 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
SMPD4-213ENST00000454468 RTL5Q5HYW3 569 aaPredicted RBP15.64■□□□□ 0.09
SMPD4-213ENST00000454468 CLUAP1Q96AJ1 413 aa15.64■□□□□ 0.09
SMPD4-213ENST00000454468 NUTM2FA1L443 756 aa15.64■□□□□ 0.09
SMPD4-213ENST00000454468 PDE3BQ13370 1112 aa15.64■□□□□ 0.09
SMPD4-213ENST00000454468 LAS1LQ9Y4W2 734 aaKnown RBP15.64■□□□□ 0.09
SMPD4-213ENST00000454468 KDM5CP41229 1560 aa15.63■□□□□ 0.09
SMPD4-213ENST00000454468 DUOX2Q9NRD8 1548 aa15.63■□□□□ 0.09
SMPD4-213ENST00000454468 SOX12O15370 315 aa15.63■□□□□ 0.09
SMPD4-213ENST00000454468 CDC42BPBQ9Y5S2 1711 aa15.63■□□□□ 0.09
SMPD4-213ENST00000454468 ADCY10Q96PN6 1610 aa15.62■□□□□ 0.09
SMPD4-213ENST00000454468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMPD4-213ENST00000454468 CD109Q6YHK3 1445 aa15.62■□□□□ 0.09
SMPD4-213ENST00000454468 CFAP53Q96M91 514 aa15.61■□□□□ 0.09
SMPD4-213ENST00000454468 GGNBP2Q9H3C7 697 aa15.61■□□□□ 0.09
SMPD4-213ENST00000454468 NOP58Q9Y2X3 529 aaKnown RBP15.61■□□□□ 0.09
SMPD4-213ENST00000454468 FBXO31Q5XUX0 539 aaPredicted RBP15.6■□□□□ 0.09
SMPD4-213ENST00000454468 ARHGEF5Q12774 1597 aa15.6■□□□□ 0.09
SMPD4-213ENST00000454468 WDR7Q9Y4E6 1490 aa15.6■□□□□ 0.09
SMPD4-213ENST00000454468 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
SMPD4-213ENST00000454468 PREX2Q70Z35 1606 aa15.59■□□□□ 0.09
SMPD4-213ENST00000454468 BCAR3O75815 825 aa15.59■□□□□ 0.09
SMPD4-213ENST00000454468 PARD3Q8TEW0 1356 aa15.59■□□□□ 0.09
SMPD4-213ENST00000454468 MTHFSP49914 203 aa15.59■□□□□ 0.09
SMPD4-213ENST00000454468 CROCC2H7BZ55 1655 aa15.58■□□□□ 0.08
SMPD4-213ENST00000454468 NOS1P29475 1434 aa15.58■□□□□ 0.08
SMPD4-213ENST00000454468 VGFO15240 615 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-213ENST00000454468 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
SMPD4-213ENST00000454468 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
SMPD4-213ENST00000454468 IDI1Q13907 227 aa15.57■□□□□ 0.08
SMPD4-213ENST00000454468 CARD14Q9BXL6 1004 aa15.57■□□□□ 0.08
SMPD4-213ENST00000454468 UGGT1Q9NYU2 1555 aa15.57■□□□□ 0.08
SMPD4-213ENST00000454468 SLC24A1O60721 1099 aa15.56■□□□□ 0.08
SMPD4-213ENST00000454468 COG6Q9Y2V7 657 aa15.56■□□□□ 0.08
SMPD4-213ENST00000454468 MYO5CQ9NQX4 1742 aa15.56■□□□□ 0.08
SMPD4-213ENST00000454468 NEFMP07197 916 aa15.55■□□□□ 0.08
SMPD4-213ENST00000454468 SLC4A3P48751 1232 aa15.55■□□□□ 0.08
SMPD4-213ENST00000454468 PDE4AP27815 886 aa15.55■□□□□ 0.08
SMPD4-213ENST00000454468 FBLN1P23142 703 aa15.54■□□□□ 0.08
SMPD4-213ENST00000454468 ZCCHC11Q5TAX3 1644 aaKnown RBP15.54■□□□□ 0.08
SMPD4-213ENST00000454468 KDM5DQ9BY66 1539 aa15.54■□□□□ 0.08
SMPD4-213ENST00000454468 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
SMPD4-213ENST00000454468 PANK1Q8TE04 598 aa15.53■□□□□ 0.08
SMPD4-213ENST00000454468 PRAM1Q96QH2 718 aa15.53■□□□□ 0.08
SMPD4-213ENST00000454468 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
SMPD4-213ENST00000454468 SCAF11Q99590 1463 aaKnown RBP15.53■□□□□ 0.08
SMPD4-213ENST00000454468 COL17A1Q9UMD9 1497 aaPredicted RBP15.53■□□□□ 0.08
SMPD4-213ENST00000454468 EVC2Q86UK5 1308 aa15.52■□□□□ 0.08
SMPD4-213ENST00000454468 LRPPRCP42704 1394 aaKnown RBP15.52■□□□□ 0.08
SMPD4-213ENST00000454468 MAPK8IP3Q9UPT6 1336 aa15.52■□□□□ 0.07
SMPD4-213ENST00000454468 TCP11L2Q8N4U5 519 aa15.52■□□□□ 0.07
SMPD4-213ENST00000454468 CGNL1Q0VF96 1302 aa15.51■□□□□ 0.07
SMPD4-213ENST00000454468 ATP10AO60312 1499 aa15.5■□□□□ 0.07
SMPD4-213ENST00000454468 GPRASP1Q5JY77 1395 aa15.5■□□□□ 0.07
SMPD4-213ENST00000454468 PLEKHH1Q9ULM0 1364 aa15.5■□□□□ 0.07
SMPD4-213ENST00000454468 MAST1Q9Y2H9 1570 aa15.5■□□□□ 0.07
SMPD4-213ENST00000454468 STAC3Q96MF2 364 aa15.5■□□□□ 0.07
SMPD4-213ENST00000454468 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
SMPD4-213ENST00000454468 NSD3Q9BZ95 1437 aa15.5■□□□□ 0.07
SMPD4-213ENST00000454468 TCERG1O14776 1098 aaKnown RBP15.49■□□□□ 0.07
SMPD4-213ENST00000454468 MAGI2Q86UL8 1455 aa15.49■□□□□ 0.07
SMPD4-213ENST00000454468 DUSP27Q5VZP5 1158 aa15.49■□□□□ 0.07
SMPD4-213ENST00000454468 FTSJ3Q8IY81 847 aaKnown RBP15.49■□□□□ 0.07
SMPD4-213ENST00000454468 ELL2O00472 640 aaPredicted RBP15.48■□□□□ 0.07
SMPD4-213ENST00000454468 IPO9Q96P70 1041 aaKnown RBP15.48■□□□□ 0.07
SMPD4-213ENST00000454468 WAPLQ7Z5K2 1190 aa15.48■□□□□ 0.07
SMPD4-213ENST00000454468 ABCC1P33527 1531 aa15.48■□□□□ 0.07
SMPD4-213ENST00000454468 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
SMPD4-213ENST00000454468 E9PSI1 815 aa15.46■□□□□ 0.07
SMPD4-213ENST00000454468 TSR2Q969E8 191 aaKnown RBP15.46■□□□□ 0.07
SMPD4-213ENST00000454468 HDGFL2Q7Z4V5 671 aaPredicted RBP15.46■□□□□ 0.06
SMPD4-213ENST00000454468 C14orf93Q9H972 538 aaKnown RBP15.46■□□□□ 0.06
SMPD4-213ENST00000454468 SLFN5Q08AF3 891 aa15.45■□□□□ 0.06
SMPD4-213ENST00000454468 CABP1Q9NZU7 370 aa15.45■□□□□ 0.06
SMPD4-213ENST00000454468 RTEL1-TNFRSF6BF6WH68 1400 aa15.44■□□□□ 0.06
SMPD4-213ENST00000454468 HMOX1P09601 288 aa15.44■□□□□ 0.06
SMPD4-213ENST00000454468 TERF2IPQ9NYB0 399 aa15.44■□□□□ 0.06
SMPD4-213ENST00000454468 WWC1Q8IX03 1113 aa15.43■□□□□ 0.06
SMPD4-213ENST00000454468 RUNDC1Q96C34 613 aa15.43■□□□□ 0.06
SMPD4-213ENST00000454468 ZBTB7CA1YPR0 619 aa15.42■□□□□ 0.06
SMPD4-213ENST00000454468 C14orf37Q86TY3 774 aa15.42■□□□□ 0.06
SMPD4-213ENST00000454468 TXNDC2Q86VQ3 553 aa15.42■□□□□ 0.06
SMPD4-213ENST00000454468 SMC4Q9NTJ3 1288 aa15.42■□□□□ 0.06
SMPD4-213ENST00000454468 ZNF518AQ6AHZ1 1483 aa15.41■□□□□ 0.06
SMPD4-213ENST00000454468 CDK19Q9BWU1 502 aa15.41■□□□□ 0.06
SMPD4-213ENST00000454468 TNNQ9UQP3 1299 aa15.41■□□□□ 0.06
SMPD4-213ENST00000454468 TRPM1Q7Z4N2 1603 aa15.4■□□□□ 0.06
SMPD4-213ENST00000454468 UHRF1BP1LA0JNW5 1464 aa15.4■□□□□ 0.06
SMPD4-213ENST00000454468 RNF123Q5XPI4 1314 aa15.4■□□□□ 0.06
SMPD4-213ENST00000454468 ITPRIPQ8IWB1 547 aa15.39■□□□□ 0.05
SMPD4-213ENST00000454468 ZFYVE16Q7Z3T8 1539 aa15.39■□□□□ 0.05
SMPD4-213ENST00000454468 NPATQ14207 1427 aa15.38■□□□□ 0.05
SMPD4-213ENST00000454468 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-213ENST00000454468 RIPK4P57078 832 aa15.38■□□□□ 0.05
SMPD4-213ENST00000454468 SPRYD3Q8NCJ5 442 aa15.38■□□□□ 0.05
SMPD4-213ENST00000454468 CENPQQ7L2Z9 268 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-213ENST00000454468 ARXQ96QS3 562 aa15.38■□□□□ 0.05
SMPD4-213ENST00000454468 DEKP35659 375 aaKnown RBP15.37■□□□□ 0.05
SMPD4-213ENST00000454468 IQGAP3Q86VI3 1631 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms