RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 RPGRIP1LQ68CZ1 1315 aa29.82■■■□□ 2.36
CTU2-202ENST00000453996 IQGAP1P46940 1657 aa29.82■■■□□ 2.36
CTU2-202ENST00000453996 KIF7Q2M1P5 1343 aa29.81■■■□□ 2.36
CTU2-202ENST00000453996 ESF1Q9H501 851 aaKnown RBP29.8■■■□□ 2.36
CTU2-202ENST00000453996 TMEM131LA2VDJ0 1609 aa29.79■■■□□ 2.36
CTU2-202ENST00000453996 MYO5BQ9ULV0 1848 aa29.79■■■□□ 2.36
CTU2-202ENST00000453996 ST20-MTHFSA0A0A6YYL1 179 aa29.79■■■□□ 2.36
CTU2-202ENST00000453996 IDI1Q13907 227 aa29.79■■■□□ 2.36
CTU2-202ENST00000453996 FBXO31Q5XUX0 539 aaPredicted RBP29.78■■■□□ 2.36
CTU2-202ENST00000453996 ADGRF5Q8IZF2 1346 aa29.78■■■□□ 2.36
CTU2-202ENST00000453996 NEXMIFQ5QGS0 1516 aa29.78■■■□□ 2.36
CTU2-202ENST00000453996 ZMYM3Q14202 1370 aa29.72■■■□□ 2.35
CTU2-202ENST00000453996 PIK3C2GO75747 1445 aa29.72■■■□□ 2.35
CTU2-202ENST00000453996 SCAF11Q99590 1463 aaKnown RBP29.72■■■□□ 2.35
CTU2-202ENST00000453996 SETBP1Q9Y6X0 1596 aa29.69■■■□□ 2.34
CTU2-202ENST00000453996 ANP32CO43423 234 aa29.68■■■□□ 2.34
CTU2-202ENST00000453996 CFAP70Q5T0N1 1121 aa29.67■■■□□ 2.34
CTU2-202ENST00000453996 ZFYVE9O95405 1425 aa29.65■■■□□ 2.34
CTU2-202ENST00000453996 VGFO15240 615 aaPredicted RBP29.64■■■□□ 2.34
CTU2-202ENST00000453996 FER1L4A9Z1Z3 1794 aa29.64■■■□□ 2.34
CTU2-202ENST00000453996 EIF3AQ14152 1382 aaKnown RBP29.63■■■□□ 2.33
CTU2-202ENST00000453996 TESK2Q96S53 571 aa29.61■■■□□ 2.33
CTU2-202ENST00000453996 POLR3GLQ9BT43 218 aa29.6■■■□□ 2.33
CTU2-202ENST00000453996 STAG3Q9UJ98 1225 aa29.59■■■□□ 2.33
CTU2-202ENST00000453996 C14orf93Q9H972 538 aaKnown RBP29.59■■■□□ 2.33
CTU2-202ENST00000453996 A2ML1A8K2U0 1454 aa29.59■■■□□ 2.33
CTU2-202ENST00000453996 ADGRB1O14514 1584 aa29.58■■■□□ 2.33
CTU2-202ENST00000453996 TNRQ92752 1358 aa29.57■■■□□ 2.32
CTU2-202ENST00000453996 MYO3AQ8NEV4 1616 aa29.56■■■□□ 2.32
CTU2-202ENST00000453996 C3P01024 1663 aa29.56■■■□□ 2.32
CTU2-202ENST00000453996 KDM5AP29375 1690 aaKnown RBP29.56■■■□□ 2.32
CTU2-202ENST00000453996 NUTM2DQ5VT03 806 aaPredicted RBP29.55■■■□□ 2.32
CTU2-202ENST00000453996 DISP3Q9P2K9 1392 aa29.55■■■□□ 2.32
CTU2-202ENST00000453996 TMF1P82094 1093 aa29.54■■■□□ 2.32
CTU2-202ENST00000453996 CCER2I3L3R5 266 aa29.52■■■□□ 2.32
CTU2-202ENST00000453996 YTHDC1Q96MU7 727 aaKnown RBP29.49■■■□□ 2.31
CTU2-202ENST00000453996 UBR1Q8IWV7 1749 aa29.48■■■□□ 2.31
CTU2-202ENST00000453996 RIMS2Q9UQ26 1411 aa29.47■■■□□ 2.31
CTU2-202ENST00000453996 NLRP1Q9C000 1473 aa29.46■■■□□ 2.31
CTU2-202ENST00000453996 ASXL1Q8IXJ9 1541 aa29.43■■■□□ 2.3
CTU2-202ENST00000453996 QRICH2Q9H0J4 1663 aa29.43■■■□□ 2.3
CTU2-202ENST00000453996 SLC24A1O60721 1099 aa29.43■■■□□ 2.3
CTU2-202ENST00000453996 ARHGEF28Q8N1W1 1705 aaKnown RBP29.43■■■□□ 2.3
CTU2-202ENST00000453996 TMEM132EQ6IEE7 984 aa29.42■■■□□ 2.3
CTU2-202ENST00000453996 SBNO2Q9Y2G9 1366 aa29.42■■■□□ 2.3
CTU2-202ENST00000453996 ALKQ9UM73 1620 aa29.41■■■□□ 2.3
CTU2-202ENST00000453996 CDCA8Q53HL2 280 aa29.41■■■□□ 2.3
CTU2-202ENST00000453996 CEBPAP49715 358 aaPredicted RBP29.4■■■□□ 2.3
CTU2-202ENST00000453996 CENPBP07199 599 aaPredicted RBP29.39■■■□□ 2.3
CTU2-202ENST00000453996 PRKRIP1Q9H875 184 aaPredicted RBP29.39■■■□□ 2.3
CTU2-202ENST00000453996 CENPJQ9HC77 1338 aaPredicted RBP29.39■■■□□ 2.3
CTU2-202ENST00000453996 TRAK1Q9UPV9 953 aa29.39■■■□□ 2.29
CTU2-202ENST00000453996 RIMS1Q86UR5 1692 aaKnown RBP29.38■■■□□ 2.29
CTU2-202ENST00000453996 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.38■■■□□ 2.29
CTU2-202ENST00000453996 SETD1AO15047 1707 aaKnown RBP29.36■■■□□ 2.29
CTU2-202ENST00000453996 MYOM1P52179 1685 aa29.34■■■□□ 2.29
CTU2-202ENST00000453996 ADAMTSL3P82987 1691 aa29.34■■■□□ 2.29
CTU2-202ENST00000453996 NRXN3Q9Y4C0 1643 aa29.33■■■□□ 2.29
CTU2-202ENST00000453996 HDGFP51858 240 aaKnown RBP29.33■■■□□ 2.29
CTU2-202ENST00000453996 TMEM2Q9UHN6 1383 aa29.33■■■□□ 2.29
CTU2-202ENST00000453996 SENP3Q9H4L4 574 aaPredicted RBP29.31■■■□□ 2.28
CTU2-202ENST00000453996 YTHDC2Q9H6S0 1430 aaKnown RBP29.3■■■□□ 2.28
CTU2-202ENST00000453996 PTPRMP28827 1452 aa29.29■■■□□ 2.28
CTU2-202ENST00000453996 PLPPR3Q6T4P5 718 aa29.27■■■□□ 2.28
CTU2-202ENST00000453996 PANK3Q9H999 370 aa29.24■■■□□ 2.27
CTU2-202ENST00000453996 KTN1Q86UP2 1357 aaKnown RBP29.23■■■□□ 2.27
CTU2-202ENST00000453996 SLIT1O75093 1534 aa29.23■■■□□ 2.27
CTU2-202ENST00000453996 STK26Q9P289 416 aa29.23■■■□□ 2.27
CTU2-202ENST00000453996 PER1O15534 1290 aaPredicted RBP29.21■■■□□ 2.27
CTU2-202ENST00000453996 DLC1Q96QB1 1528 aa29.21■■■□□ 2.27
CTU2-202ENST00000453996 ARHGAP23Q9P227 1491 aa29.2■■■□□ 2.27
CTU2-202ENST00000453996 CEP170BQ9Y4F5 1589 aaPredicted RBP29.19■■■□□ 2.26
CTU2-202ENST00000453996 LRPPRCP42704 1394 aaKnown RBP29.19■■■□□ 2.26
CTU2-202ENST00000453996 TULP4Q9NRJ4 1543 aa29.19■■■□□ 2.26
CTU2-202ENST00000453996 CNGB1Q14028 1251 aaPredicted RBP29.18■■■□□ 2.26
CTU2-202ENST00000453996 KNDC1Q76NI1 1749 aa29.17■■■□□ 2.26
CTU2-202ENST00000453996 PLEKHG1Q9ULL1 1385 aa29.17■■■□□ 2.26
CTU2-202ENST00000453996 RALBP1Q15311 655 aa29.16■■■□□ 2.26
CTU2-202ENST00000453996 EVC2Q86UK5 1308 aa29.16■■■□□ 2.26
CTU2-202ENST00000453996 ZNF142P52746 1687 aaPredicted RBP29.15■■■□□ 2.26
CTU2-202ENST00000453996 THEMISQ8N1K5 641 aaPredicted RBP29.14■■■□□ 2.26
CTU2-202ENST00000453996 EID1Q9Y6B2 187 aa29.14■■■□□ 2.26
CTU2-202ENST00000453996 PRAM1Q96QH2 718 aa29.13■■■□□ 2.25
CTU2-202ENST00000453996 MRS2Q9HD23 443 aa29.13■■■□□ 2.25
CTU2-202ENST00000453996 PARD3Q8TEW0 1356 aa29.13■■■□□ 2.25
CTU2-202ENST00000453996 ABCC11Q96J66 1382 aa29.13■■■□□ 2.25
CTU2-202ENST00000453996 METP08581 1390 aa29.12■■■□□ 2.25
CTU2-202ENST00000453996 LTKP29376 864 aa29.12■■■□□ 2.25
CTU2-202ENST00000453996 CCDC184Q52MB2 194 aa29.12■■■□□ 2.25
CTU2-202ENST00000453996 BCANQ96GW7 911 aa29.12■■■□□ 2.25
CTU2-202ENST00000453996 PUS7Q96PZ0 661 aaKnown RBP29.12■■■□□ 2.25
CTU2-202ENST00000453996 POGKQ9P215 609 aa29.12■■■□□ 2.25
CTU2-202ENST00000453996 TXNDC2Q86VQ3 553 aa29.11■■■□□ 2.25
CTU2-202ENST00000453996 ADAMTS13Q76LX8 1427 aa29.11■■■□□ 2.25
CTU2-202ENST00000453996 SAFB2Q14151 953 aaKnown RBP eCLIP29.11■■■□□ 2.25
CTU2-202ENST00000453996 MYBBP1AQ9BQG0 1328 aaKnown RBP29.09■■■□□ 2.25
CTU2-202ENST00000453996 KNSTRNQ9Y448 316 aa29.09■■■□□ 2.25
CTU2-202ENST00000453996 CPS1P31327 1500 aa29.08■■■□□ 2.25
CTU2-202ENST00000453996 TECPR2O15040 1411 aa29.07■■■□□ 2.24
CTU2-202ENST00000453996 SETD1BQ9UPS6 1966 aaKnown RBP29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms