RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RRP7BPQ9NSQ0 103 aa11.02□□□□□ -0.64
LSM5-208ENST00000450169 ISY1Q9ULR0 285 aaKnown RBP11.02□□□□□ -0.65
LSM5-208ENST00000450169 MTUS2Q5JR59 1369 aa11.02□□□□□ -0.65
LSM5-208ENST00000450169 USP47Q96K76 1375 aa11.02□□□□□ -0.65
LSM5-208ENST00000450169 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
LSM5-208ENST00000450169 SMAP1Q8IYB5 467 aaPredicted RBP11.01□□□□□ -0.65
LSM5-208ENST00000450169 TRAK2O60296 914 aa11.01□□□□□ -0.65
LSM5-208ENST00000450169 SAMD9Q5K651 1589 aa11.01□□□□□ -0.65
LSM5-208ENST00000450169 EIF4G3O43432 1585 aaKnown RBP11□□□□□ -0.65
LSM5-208ENST00000450169 KDM6BO15054 1643 aa11□□□□□ -0.65
LSM5-208ENST00000450169 GRIN2BQ13224 1484 aa11□□□□□ -0.65
LSM5-208ENST00000450169 ANKRD30BQ9BXX2 1392 aa11□□□□□ -0.65
LSM5-208ENST00000450169 RIPK4P57078 832 aa10.99□□□□□ -0.65
LSM5-208ENST00000450169 NLRP1Q9C000 1473 aa10.99□□□□□ -0.65
LSM5-208ENST00000450169 TERF1P54274 439 aa10.98□□□□□ -0.65
LSM5-208ENST00000450169 NUBP1P53384 320 aa10.98□□□□□ -0.65
LSM5-208ENST00000450169 DCAF8Q5TAQ9 597 aa10.98□□□□□ -0.65
LSM5-208ENST00000450169 NLRP13Q86W25 1043 aa10.98□□□□□ -0.65
LSM5-208ENST00000450169 OFD1O75665 1012 aa10.97□□□□□ -0.65
LSM5-208ENST00000450169 SEC24BO95487 1268 aa10.97□□□□□ -0.65
LSM5-208ENST00000450169 FAM13BQ9NYF5 915 aa10.97□□□□□ -0.65
LSM5-208ENST00000450169 SNAPC4Q5SXM2 1469 aa10.97□□□□□ -0.65
LSM5-208ENST00000450169 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.97□□□□□ -0.65
LSM5-208ENST00000450169 CHIC2Q9UKJ5 165 aa10.97□□□□□ -0.65
LSM5-208ENST00000450169 KDM5CP41229 1560 aa10.97□□□□□ -0.65
LSM5-208ENST00000450169 PLEKHH2Q8IVE3 1493 aa10.96□□□□□ -0.65
LSM5-208ENST00000450169 PDIA4P13667 645 aaKnown RBP10.96□□□□□ -0.65
LSM5-208ENST00000450169 DSG3P32926 999 aa10.96□□□□□ -0.65
LSM5-208ENST00000450169 TBC1D2Q9BYX2 928 aa10.96□□□□□ -0.65
LSM5-208ENST00000450169 LRRIQ1Q96JM4 1722 aa10.96□□□□□ -0.65
LSM5-208ENST00000450169 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.66
LSM5-208ENST00000450169 ZHX1Q9UKY1 873 aaPredicted RBP10.96□□□□□ -0.66
LSM5-208ENST00000450169 BLMP54132 1417 aaPredicted RBP10.95□□□□□ -0.66
LSM5-208ENST00000450169 LMOD2Q6P5Q4 547 aa10.95□□□□□ -0.66
LSM5-208ENST00000450169 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
LSM5-208ENST00000450169 INSRP06213 1382 aa10.94□□□□□ -0.66
LSM5-208ENST00000450169 IQGAP2Q13576 1575 aa10.94□□□□□ -0.66
LSM5-208ENST00000450169 ZMYM4Q5VZL5 1548 aa10.94□□□□□ -0.66
LSM5-208ENST00000450169 DDX11L8A8MPP1 907 aa10.94□□□□□ -0.66
LSM5-208ENST00000450169 MTERF4Q7Z6M4 381 aaKnown RBP10.94□□□□□ -0.66
LSM5-208ENST00000450169 ZSCAN30Q86W11 494 aa10.94□□□□□ -0.66
LSM5-208ENST00000450169 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.94□□□□□ -0.66
LSM5-208ENST00000450169 KCNV2Q8TDN2 545 aa10.94□□□□□ -0.66
LSM5-208ENST00000450169 UPF2Q9HAU5 1272 aaKnown RBP10.94□□□□□ -0.66
LSM5-208ENST00000450169 STK24Q9Y6E0 443 aa10.94□□□□□ -0.66
LSM5-208ENST00000450169 SUPT6HQ7KZ85 1726 aaKnown RBP10.94□□□□□ -0.66
LSM5-208ENST00000450169 MBD5Q9P267 1494 aa10.93□□□□□ -0.66
LSM5-208ENST00000450169 KIF14Q15058 1648 aa10.93□□□□□ -0.66
LSM5-208ENST00000450169 MAPK8IP3Q9UPT6 1336 aa10.93□□□□□ -0.66
LSM5-208ENST00000450169 C1QBPQ07021 282 aaKnown RBP10.93□□□□□ -0.66
LSM5-208ENST00000450169 UTP14CQ5TAP6 766 aaKnown RBP10.93□□□□□ -0.66
LSM5-208ENST00000450169 CHMP5Q9NZZ3 219 aa10.93□□□□□ -0.66
LSM5-208ENST00000450169 PARD3Q8TEW0 1356 aa10.92□□□□□ -0.66
LSM5-208ENST00000450169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.92□□□□□ -0.66
LSM5-208ENST00000450169 TBC1D32Q96NH3 1257 aa10.92□□□□□ -0.66
LSM5-208ENST00000450169 NCLP19338 710 aaKnown RBP10.92□□□□□ -0.66
LSM5-208ENST00000450169 CCDC173Q0VFZ6 552 aa10.92□□□□□ -0.66
LSM5-208ENST00000450169 E9PCH4 1651 aa10.92□□□□□ -0.66
LSM5-208ENST00000450169 EIF3AQ14152 1382 aaKnown RBP10.91□□□□□ -0.66
LSM5-208ENST00000450169 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.91□□□□□ -0.66
LSM5-208ENST00000450169 MSNP26038 577 aaKnown RBP10.91□□□□□ -0.66
LSM5-208ENST00000450169 DMTNQ08495 405 aa10.91□□□□□ -0.66
LSM5-208ENST00000450169 CADPS2Q86UW7 1296 aa10.91□□□□□ -0.66
LSM5-208ENST00000450169 ZFP91Q96JP5 570 aaPredicted RBP10.91□□□□□ -0.66
LSM5-208ENST00000450169 TCOF1Q13428 1488 aaKnown RBP10.91□□□□□ -0.66
LSM5-208ENST00000450169 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
LSM5-208ENST00000450169 ZNF326Q5BKZ1 582 aaKnown RBP10.91□□□□□ -0.66
LSM5-208ENST00000450169 PRDM10Q9NQV6 1147 aa10.91□□□□□ -0.66
LSM5-208ENST00000450169 GAS2L3Q86XJ1 694 aa10.9□□□□□ -0.66
LSM5-208ENST00000450169 GRIN2AQ12879 1464 aa10.9□□□□□ -0.66
LSM5-208ENST00000450169 CANXP27824 592 aaKnown RBP10.89□□□□□ -0.67
LSM5-208ENST00000450169 PPP1R9BQ96SB3 815 aa10.89□□□□□ -0.67
LSM5-208ENST00000450169 R3HCC1Q9Y3T6 440 aaKnown RBP10.89□□□□□ -0.67
LSM5-208ENST00000450169 EHBP1L1Q8N3D4 1523 aa10.89□□□□□ -0.67
LSM5-208ENST00000450169 UGGT2Q9NYU1 1516 aa10.89□□□□□ -0.67
LSM5-208ENST00000450169 VGFO15240 615 aaPredicted RBP10.89□□□□□ -0.67
LSM5-208ENST00000450169 ARID3AQ99856 593 aa10.89□□□□□ -0.67
LSM5-208ENST00000450169 UQCRHLA0A096LP55 91 aa10.88□□□□□ -0.67
LSM5-208ENST00000450169 UQCRHP07919 91 aa10.88□□□□□ -0.67
LSM5-208ENST00000450169 IGHDP01880 384 aa10.88□□□□□ -0.67
LSM5-208ENST00000450169 DUSP27Q5VZP5 1158 aa10.88□□□□□ -0.67
LSM5-208ENST00000450169 STAC3Q96MF2 364 aa10.88□□□□□ -0.67
LSM5-208ENST00000450169 NAP1L2Q9ULW6 460 aaPredicted RBP10.88□□□□□ -0.67
LSM5-208ENST00000450169 DYNC1I1O14576 645 aa10.87□□□□□ -0.67
LSM5-208ENST00000450169 ANP32BQ92688 251 aaKnown RBP10.87□□□□□ -0.67
LSM5-208ENST00000450169 MAGI1Q96QZ7 1491 aaPredicted RBP10.87□□□□□ -0.67
LSM5-208ENST00000450169 ARHGEF11O15085 1522 aa10.87□□□□□ -0.67
LSM5-208ENST00000450169 ZSCAN20P17040 1043 aaPredicted RBP10.86□□□□□ -0.67
LSM5-208ENST00000450169 TNNT2P45379 298 aaPredicted RBP10.86□□□□□ -0.67
LSM5-208ENST00000450169 CEP170Q5SW79 1584 aa10.86□□□□□ -0.67
LSM5-208ENST00000450169 KIAA0586Q9BVV6 1533 aa10.86□□□□□ -0.67
LSM5-208ENST00000450169 RALGAPBQ86X10 1494 aa10.86□□□□□ -0.67
LSM5-208ENST00000450169 NASPP49321 788 aaPredicted RBP10.86□□□□□ -0.67
LSM5-208ENST00000450169 CCDC94Q9BW85 323 aaPredicted RBP10.85□□□□□ -0.67
LSM5-208ENST00000450169 CARD11Q9BXL7 1154 aa10.85□□□□□ -0.67
LSM5-208ENST00000450169 DISP1Q96F81 1524 aa10.85□□□□□ -0.67
LSM5-208ENST00000450169 SYNJ2O15056 1496 aa10.85□□□□□ -0.67
LSM5-208ENST00000450169 SKOR2Q2VWA4 1001 aaPredicted RBP10.84□□□□□ -0.67
LSM5-208ENST00000450169 PPP4R3BQ5MIZ7 849 aa10.84□□□□□ -0.67
LSM5-208ENST00000450169 KIAA0556O60303 1618 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms