RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 SYNMO15061 1565 aa18■□□□□ 0.47
POLR1B-209ENST00000448770 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
POLR1B-209ENST00000448770 TRPM2O94759 1503 aa17.99■□□□□ 0.47
POLR1B-209ENST00000448770 KNSTRNQ9Y448 316 aa17.98■□□□□ 0.47
POLR1B-209ENST00000448770 ASXL1Q8IXJ9 1541 aa17.97■□□□□ 0.47
POLR1B-209ENST00000448770 CCDC146Q8IYE0 955 aa17.97■□□□□ 0.47
POLR1B-209ENST00000448770 CEP152O94986 1710 aa17.97■□□□□ 0.47
POLR1B-209ENST00000448770 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
POLR1B-209ENST00000448770 ZCCHC11Q5TAX3 1644 aaKnown RBP17.97■□□□□ 0.47
POLR1B-209ENST00000448770 NEFMP07197 916 aa17.96■□□□□ 0.47
POLR1B-209ENST00000448770 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
POLR1B-209ENST00000448770 ZFYVE16Q7Z3T8 1539 aa17.94■□□□□ 0.46
POLR1B-209ENST00000448770 SLC4A3P48751 1232 aa17.94■□□□□ 0.46
POLR1B-209ENST00000448770 AFAP1Q8N556 730 aa17.94■□□□□ 0.46
POLR1B-209ENST00000448770 PTPRTO14522 1441 aa17.94■□□□□ 0.46
POLR1B-209ENST00000448770 PIK3C2GO75747 1445 aa17.94■□□□□ 0.46
POLR1B-209ENST00000448770 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
POLR1B-209ENST00000448770 GOLGA2Q08379 1002 aa17.93■□□□□ 0.46
POLR1B-209ENST00000448770 SLFN5Q08AF3 891 aa17.93■□□□□ 0.46
POLR1B-209ENST00000448770 SCAPERQ9BY12 1400 aa17.93■□□□□ 0.46
POLR1B-209ENST00000448770 C8orf34Q49A92 452 aa17.92■□□□□ 0.46
POLR1B-209ENST00000448770 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
POLR1B-209ENST00000448770 UGGT1Q9NYU2 1555 aa17.92■□□□□ 0.46
POLR1B-209ENST00000448770 TRMT2AQ8IZ69 625 aaKnown RBP17.91■□□□□ 0.46
POLR1B-209ENST00000448770 DEPDC5O75140 1603 aa17.91■□□□□ 0.46
POLR1B-209ENST00000448770 CENPQQ7L2Z9 268 aaPredicted RBP17.9■□□□□ 0.46
POLR1B-209ENST00000448770 IL27Q8NEV9 243 aa17.9■□□□□ 0.46
POLR1B-209ENST00000448770 APAF1O14727 1248 aa17.89■□□□□ 0.45
POLR1B-209ENST00000448770 BCAR3O75815 825 aa17.89■□□□□ 0.45
POLR1B-209ENST00000448770 SPAG9O60271 1321 aaKnown RBP17.89■□□□□ 0.45
POLR1B-209ENST00000448770 ERVK-7P63135 1459 aa17.88■□□□□ 0.45
POLR1B-209ENST00000448770 CARD14Q9BXL6 1004 aa17.88■□□□□ 0.45
POLR1B-209ENST00000448770 KDM5AP29375 1690 aaKnown RBP17.87■□□□□ 0.45
POLR1B-209ENST00000448770 ABCA6Q8N139 1617 aa17.87■□□□□ 0.45
POLR1B-209ENST00000448770 TET3O43151 1660 aa17.87■□□□□ 0.45
POLR1B-209ENST00000448770 CFAP70Q5T0N1 1121 aa17.87■□□□□ 0.45
POLR1B-209ENST00000448770 NPC1L1Q9UHC9 1359 aa17.87■□□□□ 0.45
POLR1B-209ENST00000448770 VWDEQ8N2E2 1590 aa17.86■□□□□ 0.45
POLR1B-209ENST00000448770 UHRF1BP1LA0JNW5 1464 aa17.85■□□□□ 0.45
POLR1B-209ENST00000448770 RGS3P49796 1198 aa17.85■□□□□ 0.45
POLR1B-209ENST00000448770 ADGRF5Q8IZF2 1346 aa17.85■□□□□ 0.45
POLR1B-209ENST00000448770 USP35Q9P2H5 1018 aa17.84■□□□□ 0.45
POLR1B-209ENST00000448770 NKTRP30414 1462 aaKnown RBP17.84■□□□□ 0.45
POLR1B-209ENST00000448770 RTEL1-TNFRSF6BF6WH68 1400 aa17.84■□□□□ 0.45
POLR1B-209ENST00000448770 MROH1Q8NDA8 1641 aa17.84■□□□□ 0.45
POLR1B-209ENST00000448770 PPM1GO15355 546 aaPredicted RBP17.83■□□□□ 0.45
POLR1B-209ENST00000448770 FAM161AQ3B820 660 aa17.83■□□□□ 0.45
POLR1B-209ENST00000448770 OSCARQ8IYS5 282 aa17.83■□□□□ 0.45
POLR1B-209ENST00000448770 KIAA1210Q9ULL0 1709 aa17.83■□□□□ 0.45
POLR1B-209ENST00000448770 CDCA8Q53HL2 280 aa17.83■□□□□ 0.44
POLR1B-209ENST00000448770 DDRGK1Q96HY6 314 aa17.83■□□□□ 0.44
POLR1B-209ENST00000448770 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.44
POLR1B-209ENST00000448770 INO80Q9ULG1 1556 aaPredicted RBP17.82■□□□□ 0.44
POLR1B-209ENST00000448770 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
POLR1B-209ENST00000448770 IGHDP01880 384 aa17.81■□□□□ 0.44
POLR1B-209ENST00000448770 NFKBIBQ15653 356 aa17.81■□□□□ 0.44
POLR1B-209ENST00000448770 EIF3AQ14152 1382 aaKnown RBP17.81■□□□□ 0.44
POLR1B-209ENST00000448770 ATP7AQ04656 1500 aa17.81■□□□□ 0.44
POLR1B-209ENST00000448770 KIF3BO15066 747 aa17.78■□□□□ 0.44
POLR1B-209ENST00000448770 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.78■□□□□ 0.44
POLR1B-209ENST00000448770 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
POLR1B-209ENST00000448770 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
POLR1B-209ENST00000448770 MYOM2P54296 1465 aa17.78■□□□□ 0.44
POLR1B-209ENST00000448770 SHPRHQ149N8 1683 aa17.77■□□□□ 0.44
POLR1B-209ENST00000448770 USP19O94966 1318 aa17.77■□□□□ 0.43
POLR1B-209ENST00000448770 ARAP3Q8WWN8 1544 aa17.76■□□□□ 0.43
POLR1B-209ENST00000448770 E9PSI1 815 aa17.76■□□□□ 0.43
POLR1B-209ENST00000448770 STAC3Q96MF2 364 aa17.76■□□□□ 0.43
POLR1B-209ENST00000448770 ABCA9Q8IUA7 1624 aa17.76■□□□□ 0.43
POLR1B-209ENST00000448770 NEURL4Q96JN8 1562 aa17.75■□□□□ 0.43
POLR1B-209ENST00000448770 PANK1Q8TE04 598 aa17.75■□□□□ 0.43
POLR1B-209ENST00000448770 TNNQ9UQP3 1299 aa17.74■□□□□ 0.43
POLR1B-209ENST00000448770 MYO3AQ8NEV4 1616 aa17.74■□□□□ 0.43
POLR1B-209ENST00000448770 WWC1Q8IX03 1113 aa17.74■□□□□ 0.43
POLR1B-209ENST00000448770 FANCAO15360 1455 aa17.74■□□□□ 0.43
POLR1B-209ENST00000448770 PPRC1Q5VV67 1664 aaKnown RBP17.74■□□□□ 0.43
POLR1B-209ENST00000448770 SEC24BO95487 1268 aa17.73■□□□□ 0.43
POLR1B-209ENST00000448770 NRXN1Q9ULB1 1477 aa17.73■□□□□ 0.43
POLR1B-209ENST00000448770 COG6Q9Y2V7 657 aa17.73■□□□□ 0.43
POLR1B-209ENST00000448770 VIRMAQ69YN4 1812 aaKnown RBP17.73■□□□□ 0.43
POLR1B-209ENST00000448770 EFCAB6Q5THR3 1501 aa17.72■□□□□ 0.43
POLR1B-209ENST00000448770 KANK1Q14678 1352 aa17.72■□□□□ 0.43
POLR1B-209ENST00000448770 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
POLR1B-209ENST00000448770 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
POLR1B-209ENST00000448770 BRPF3Q9ULD4 1205 aa17.71■□□□□ 0.43
POLR1B-209ENST00000448770 KIF1BO60333 1816 aa17.71■□□□□ 0.43
POLR1B-209ENST00000448770 NSD3Q9BZ95 1437 aa17.71■□□□□ 0.43
POLR1B-209ENST00000448770 TNNT2P45379 298 aaPredicted RBP17.71■□□□□ 0.42
POLR1B-209ENST00000448770 FRAT1Q92837 279 aaPredicted RBP17.71■□□□□ 0.42
POLR1B-209ENST00000448770 IQSEC2Q5JU85 1478 aa17.71■□□□□ 0.42
POLR1B-209ENST00000448770 NOS1P29475 1434 aa17.7■□□□□ 0.42
POLR1B-209ENST00000448770 GSE1Q14687 1217 aa17.7■□□□□ 0.42
POLR1B-209ENST00000448770 CENPJQ9HC77 1338 aaPredicted RBP17.7■□□□□ 0.42
POLR1B-209ENST00000448770 FRAT2O75474 233 aaPredicted RBP17.7■□□□□ 0.42
POLR1B-209ENST00000448770 NEUROD2Q15784 382 aa17.69■□□□□ 0.42
POLR1B-209ENST00000448770 ADGRL1O94910 1474 aa17.69■□□□□ 0.42
POLR1B-209ENST00000448770 NLRP1Q9C000 1473 aa17.69■□□□□ 0.42
POLR1B-209ENST00000448770 ZC3H13Q5T200 1668 aaKnown RBP17.68■□□□□ 0.42
POLR1B-209ENST00000448770 RLBP1P12271 317 aa17.68■□□□□ 0.42
POLR1B-209ENST00000448770 CLUAP1Q96AJ1 413 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms