RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 IQGAP3Q86VI3 1631 aa8.14□□□□□ -1.11
PROM1-201ENST00000447510 CFAP70Q5T0N1 1121 aa8.14□□□□□ -1.11
PROM1-201ENST00000447510 ROCK2O75116 1388 aaKnown RBP8.14□□□□□ -1.11
PROM1-201ENST00000447510 TET3O43151 1660 aa8.14□□□□□ -1.11
PROM1-201ENST00000447510 EIF4G2P78344 907 aaKnown RBP eCLIP8.14□□□□□ -1.11
PROM1-201ENST00000447510 RIMS1Q86UR5 1692 aaKnown RBP8.14□□□□□ -1.11
PROM1-201ENST00000447510 TMEM132EQ6IEE7 984 aa8.13□□□□□ -1.11
PROM1-201ENST00000447510 TRAK1Q9UPV9 953 aa8.13□□□□□ -1.11
PROM1-201ENST00000447510 MADDQ8WXG6 1647 aa8.13□□□□□ -1.11
PROM1-201ENST00000447510 RNF17Q9BXT8 1623 aaKnown RBP8.13□□□□□ -1.11
PROM1-201ENST00000447510 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
PROM1-201ENST00000447510 NCKAP5LQ9HCH0 1330 aa8.13□□□□□ -1.11
PROM1-201ENST00000447510 MSH5O43196 834 aa8.12□□□□□ -1.11
PROM1-201ENST00000447510 ADGRF5Q8IZF2 1346 aa8.12□□□□□ -1.11
PROM1-201ENST00000447510 NOS1P29475 1434 aa8.12□□□□□ -1.11
PROM1-201ENST00000447510 RIMS2Q9UQ26 1411 aa8.12□□□□□ -1.11
PROM1-201ENST00000447510 IRX6P78412 446 aaPredicted RBP8.12□□□□□ -1.11
PROM1-201ENST00000447510 LMTK2Q8IWU2 1503 aa8.12□□□□□ -1.11
PROM1-201ENST00000447510 UGGT1Q9NYU2 1555 aa8.12□□□□□ -1.11
PROM1-201ENST00000447510 EIF5BO60841 1220 aaKnown RBP8.12□□□□□ -1.11
PROM1-201ENST00000447510 CNGB1Q14028 1251 aaPredicted RBP8.12□□□□□ -1.11
PROM1-201ENST00000447510 CAMSAP1Q5T5Y3 1602 aa8.11□□□□□ -1.11
PROM1-201ENST00000447510 FER1L4A9Z1Z3 1794 aa8.11□□□□□ -1.11
PROM1-201ENST00000447510 PTPRTO14522 1441 aa8.11□□□□□ -1.11
PROM1-201ENST00000447510 BCORL1Q5H9F3 1711 aa8.11□□□□□ -1.11
PROM1-201ENST00000447510 PLA2R1Q13018 1463 aa8.1□□□□□ -1.11
PROM1-201ENST00000447510 NLRP1Q9C000 1473 aa8.1□□□□□ -1.11
PROM1-201ENST00000447510 DMRT2Q9Y5R5 561 aa8.1□□□□□ -1.11
PROM1-201ENST00000447510 NBPF1Q3BBV0 1214 aa8.1□□□□□ -1.11
PROM1-201ENST00000447510 NBPF8Q3BBV2 869 aa8.1□□□□□ -1.11
PROM1-201ENST00000447510 MROH1Q8NDA8 1641 aa8.1□□□□□ -1.11
PROM1-201ENST00000447510 TMEM2Q9UHN6 1383 aa8.1□□□□□ -1.11
PROM1-201ENST00000447510 ZC3H13Q5T200 1668 aaKnown RBP8.09□□□□□ -1.11
PROM1-201ENST00000447510 DEPDC5O75140 1603 aa8.09□□□□□ -1.11
PROM1-201ENST00000447510 LTKP29376 864 aa8.09□□□□□ -1.11
PROM1-201ENST00000447510 E9PCH4 1651 aa8.09□□□□□ -1.11
PROM1-201ENST00000447510 TRPM2O94759 1503 aa8.09□□□□□ -1.11
PROM1-201ENST00000447510 VWDEQ8N2E2 1590 aa8.08□□□□□ -1.12
PROM1-201ENST00000447510 RTL5Q5HYW3 569 aaPredicted RBP8.08□□□□□ -1.12
PROM1-201ENST00000447510 PROSER2Q86WR7 435 aaPredicted RBP8.08□□□□□ -1.12
PROM1-201ENST00000447510 A2ML1A8K2U0 1454 aa8.07□□□□□ -1.12
PROM1-201ENST00000447510 HSPA5P11021 654 aaKnown RBP8.07□□□□□ -1.12
PROM1-201ENST00000447510 SRPK2P78362 688 aaKnown RBP8.07□□□□□ -1.12
PROM1-201ENST00000447510 TMC1Q8TDI8 760 aa8.07□□□□□ -1.12
PROM1-201ENST00000447510 EIF3AQ14152 1382 aaKnown RBP8.07□□□□□ -1.12
PROM1-201ENST00000447510 NUTM2FA1L443 756 aa8.06□□□□□ -1.12
PROM1-201ENST00000447510 C14orf93Q9H972 538 aaKnown RBP8.06□□□□□ -1.12
PROM1-201ENST00000447510 MINK1Q8N4C8 1332 aaPredicted RBP8.06□□□□□ -1.12
PROM1-201ENST00000447510 ST20-MTHFSA0A0A6YYL1 179 aa8.06□□□□□ -1.12
PROM1-201ENST00000447510 AMOTL2Q9Y2J4 779 aa8.06□□□□□ -1.12
PROM1-201ENST00000447510 SETD1BQ9UPS6 1966 aaKnown RBP8.06□□□□□ -1.12
PROM1-201ENST00000447510 SPHKAPQ2M3C7 1700 aa8.06□□□□□ -1.12
PROM1-201ENST00000447510 TMF1P82094 1093 aa8.05□□□□□ -1.12
PROM1-201ENST00000447510 CDCA8Q53HL2 280 aa8.05□□□□□ -1.12
PROM1-201ENST00000447510 SIGLEC1Q9BZZ2 1709 aa8.05□□□□□ -1.12
PROM1-201ENST00000447510 PRAM1Q96QH2 718 aa8.05□□□□□ -1.12
PROM1-201ENST00000447510 SPATA31E1Q6ZUB1 1445 aa8.05□□□□□ -1.12
PROM1-201ENST00000447510 PREX1Q8TCU6 1659 aa8.05□□□□□ -1.12
PROM1-201ENST00000447510 CLTCL1P53675 1640 aa8.05□□□□□ -1.12
PROM1-201ENST00000447510 SLC24A1O60721 1099 aa8.05□□□□□ -1.12
PROM1-201ENST00000447510 RBM33Q96EV2 1170 aaKnown RBP8.05□□□□□ -1.12
PROM1-201ENST00000447510 TBX22Q9Y458 520 aa8.04□□□□□ -1.12
PROM1-201ENST00000447510 SPATA31D1Q6ZQQ2 1576 aa8.04□□□□□ -1.12
PROM1-201ENST00000447510 CENPJQ9HC77 1338 aaPredicted RBP8.04□□□□□ -1.12
PROM1-201ENST00000447510 USP47Q96K76 1375 aa8.04□□□□□ -1.12
PROM1-201ENST00000447510 ADAMTSL3P82987 1691 aa8.04□□□□□ -1.12
PROM1-201ENST00000447510 KIF1BO60333 1816 aa8.04□□□□□ -1.12
PROM1-201ENST00000447510 C3P01024 1663 aa8.04□□□□□ -1.12
PROM1-201ENST00000447510 SCAF11Q99590 1463 aaKnown RBP8.04□□□□□ -1.12
PROM1-201ENST00000447510 DDX10Q13206 875 aaKnown RBP8.03□□□□□ -1.12
PROM1-201ENST00000447510 WAPLQ7Z5K2 1190 aa8.03□□□□□ -1.12
PROM1-201ENST00000447510 SYNMO15061 1565 aa8.03□□□□□ -1.12
PROM1-201ENST00000447510 PLEKHG5O94827 1062 aa8.03□□□□□ -1.12
PROM1-201ENST00000447510 ADGRB3O60242 1522 aa8.03□□□□□ -1.12
PROM1-201ENST00000447510 ATF3P18847 181 aa8.03□□□□□ -1.12
PROM1-201ENST00000447510 NPHP4O75161 1426 aaPredicted RBP8.02□□□□□ -1.12
PROM1-201ENST00000447510 PRAG1Q86YV5 1406 aa8.02□□□□□ -1.13
PROM1-201ENST00000447510 PIK3C2BO00750 1634 aa8.02□□□□□ -1.13
PROM1-201ENST00000447510 CEP170BQ9Y4F5 1589 aaPredicted RBP8.02□□□□□ -1.13
PROM1-201ENST00000447510 PLEKHG1Q9ULL1 1385 aa8.02□□□□□ -1.13
PROM1-201ENST00000447510 MROH2AA6NES4 1674 aa8.01□□□□□ -1.13
PROM1-201ENST00000447510 KCNA6P17658 529 aa8.01□□□□□ -1.13
PROM1-201ENST00000447510 EVC2Q86UK5 1308 aa8.01□□□□□ -1.13
PROM1-201ENST00000447510 LMOD2Q6P5Q4 547 aa8.01□□□□□ -1.13
PROM1-201ENST00000447510 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
PROM1-201ENST00000447510 NGDNQ8NEJ9 315 aaKnown RBP7.99□□□□□ -1.13
PROM1-201ENST00000447510 CABP2Q9NPB3 220 aa7.99□□□□□ -1.13
PROM1-201ENST00000447510 METP08581 1390 aa7.98□□□□□ -1.13
PROM1-201ENST00000447510 YTHDC2Q9H6S0 1430 aaKnown RBP7.98□□□□□ -1.13
PROM1-201ENST00000447510 CDK19Q9BWU1 502 aa7.97□□□□□ -1.13
PROM1-201ENST00000447510 MYO3AQ8NEV4 1616 aa7.97□□□□□ -1.13
PROM1-201ENST00000447510 ZFYVE9O95405 1425 aa7.97□□□□□ -1.13
PROM1-201ENST00000447510 ZNF335Q9H4Z2 1342 aaPredicted RBP7.97□□□□□ -1.13
PROM1-201ENST00000447510 MYOM2P54296 1465 aa7.97□□□□□ -1.13
PROM1-201ENST00000447510 PAK3O75914 559 aaPredicted RBP7.97□□□□□ -1.13
PROM1-201ENST00000447510 LRPPRCP42704 1394 aaKnown RBP7.97□□□□□ -1.13
PROM1-201ENST00000447510 HDGFL2Q7Z4V5 671 aaPredicted RBP7.97□□□□□ -1.13
PROM1-201ENST00000447510 TMEM131LA2VDJ0 1609 aa7.97□□□□□ -1.13
PROM1-201ENST00000447510 ESCO1Q5FWF5 840 aa7.96□□□□□ -1.13
PROM1-201ENST00000447510 PIK3C2GO75747 1445 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 901.6 ms