RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 MYO3AQ8NEV4 1616 aa12.73□□□□□ -0.37
LINC02549-201ENST00000445346 CEP170BQ9Y4F5 1589 aaPredicted RBP12.73□□□□□ -0.37
LINC02549-201ENST00000445346 KIF3BO15066 747 aa12.73□□□□□ -0.37
LINC02549-201ENST00000445346 PIP4K2BP78356 416 aa12.73□□□□□ -0.37
LINC02549-201ENST00000445346 TMEM106CQ9BVX2 250 aa12.73□□□□□ -0.37
LINC02549-201ENST00000445346 PLXNC1O60486 1568 aa12.73□□□□□ -0.37
LINC02549-201ENST00000445346 INO80Q9ULG1 1556 aaPredicted RBP12.73□□□□□ -0.37
LINC02549-201ENST00000445346 TCOF1Q13428 1488 aaKnown RBP12.72□□□□□ -0.37
LINC02549-201ENST00000445346 TOM1O60784 492 aa12.72□□□□□ -0.37
LINC02549-201ENST00000445346 RTN4Q9NQC3 1192 aaKnown RBP12.72□□□□□ -0.37
LINC02549-201ENST00000445346 DHX29Q7Z478 1369 aaKnown RBP12.71□□□□□ -0.37
LINC02549-201ENST00000445346 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
LINC02549-201ENST00000445346 ZNF467Q7Z7K2 595 aaPredicted RBP12.71□□□□□ -0.37
LINC02549-201ENST00000445346 ZNF142P52746 1687 aaPredicted RBP12.7□□□□□ -0.38
LINC02549-201ENST00000445346 WASHC2CQ9Y4E1 1318 aa12.7□□□□□ -0.38
LINC02549-201ENST00000445346 FBXO31Q5XUX0 539 aaPredicted RBP12.7□□□□□ -0.38
LINC02549-201ENST00000445346 ANKLE2Q86XL3 938 aa12.7□□□□□ -0.38
LINC02549-201ENST00000445346 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
LINC02549-201ENST00000445346 A2ML1A8K2U0 1454 aa12.7□□□□□ -0.38
LINC02549-201ENST00000445346 PSEN1P49768 467 aa12.69□□□□□ -0.38
LINC02549-201ENST00000445346 ADGBQ8N7X0 1667 aa12.69□□□□□ -0.38
LINC02549-201ENST00000445346 RTEL1-TNFRSF6BF6WH68 1400 aa12.69□□□□□ -0.38
LINC02549-201ENST00000445346 TNRQ92752 1358 aa12.69□□□□□ -0.38
LINC02549-201ENST00000445346 MBD5Q9P267 1494 aa12.68□□□□□ -0.38
LINC02549-201ENST00000445346 HSPA1LP34931 641 aa12.68□□□□□ -0.38
LINC02549-201ENST00000445346 RSPH4AQ5TD94 716 aa12.68□□□□□ -0.38
LINC02549-201ENST00000445346 THEMISQ8N1K5 641 aaPredicted RBP12.68□□□□□ -0.38
LINC02549-201ENST00000445346 RIOK3O14730 519 aaKnown RBP12.67□□□□□ -0.38
LINC02549-201ENST00000445346 TSPY4P0CV99 314 aa12.67□□□□□ -0.38
LINC02549-201ENST00000445346 TSPY10P0CW01 314 aa12.67□□□□□ -0.38
LINC02549-201ENST00000445346 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
LINC02549-201ENST00000445346 TIAM1Q13009 1591 aa12.66□□□□□ -0.38
LINC02549-201ENST00000445346 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
LINC02549-201ENST00000445346 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
LINC02549-201ENST00000445346 CEP162Q5TB80 1403 aa12.65□□□□□ -0.38
LINC02549-201ENST00000445346 POTEJP0CG39 1038 aa12.65□□□□□ -0.38
LINC02549-201ENST00000445346 COLQQ9Y215 455 aaPredicted RBP12.65□□□□□ -0.38
LINC02549-201ENST00000445346 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
LINC02549-201ENST00000445346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC02549-201ENST00000445346 CPS1P31327 1500 aa12.64□□□□□ -0.39
LINC02549-201ENST00000445346 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
LINC02549-201ENST00000445346 CCDC141Q6ZP82 1450 aa12.64□□□□□ -0.39
LINC02549-201ENST00000445346 SHANK2Q9UPX8 1470 aa12.64□□□□□ -0.39
LINC02549-201ENST00000445346 KDM5DQ9BY66 1539 aa12.63□□□□□ -0.39
LINC02549-201ENST00000445346 PZPP20742 1482 aa12.63□□□□□ -0.39
LINC02549-201ENST00000445346 MIA2Q96PC5 1412 aa12.62□□□□□ -0.39
LINC02549-201ENST00000445346 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
LINC02549-201ENST00000445346 FAM135AQ9P2D6 1515 aa12.62□□□□□ -0.39
LINC02549-201ENST00000445346 CAMSAP2Q08AD1 1489 aa12.6□□□□□ -0.39
LINC02549-201ENST00000445346 NLRP1Q9C000 1473 aa12.6□□□□□ -0.39
LINC02549-201ENST00000445346 NPHP4O75161 1426 aaPredicted RBP12.6□□□□□ -0.39
LINC02549-201ENST00000445346 UGGT1Q9NYU2 1555 aa12.6□□□□□ -0.39
LINC02549-201ENST00000445346 POLR1AO95602 1720 aaPredicted RBP12.59□□□□□ -0.39
LINC02549-201ENST00000445346 NCOA2Q15596 1464 aa12.59□□□□□ -0.39
LINC02549-201ENST00000445346 NEURL4Q96JN8 1562 aa12.59□□□□□ -0.39
LINC02549-201ENST00000445346 MED1Q15648 1581 aaPredicted RBP12.58□□□□□ -0.4
LINC02549-201ENST00000445346 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
LINC02549-201ENST00000445346 CABP2Q9NPB3 220 aa12.57□□□□□ -0.4
LINC02549-201ENST00000445346 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
LINC02549-201ENST00000445346 MED14O60244 1454 aa12.55□□□□□ -0.4
LINC02549-201ENST00000445346 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
LINC02549-201ENST00000445346 VWDEQ8N2E2 1590 aa12.55□□□□□ -0.4
LINC02549-201ENST00000445346 DEPDC5O75140 1603 aa12.53□□□□□ -0.4
LINC02549-201ENST00000445346 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
LINC02549-201ENST00000445346 ARHGEF5Q12774 1597 aa12.52□□□□□ -0.4
LINC02549-201ENST00000445346 C7P10643 843 aa12.52□□□□□ -0.41
LINC02549-201ENST00000445346 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.41
LINC02549-201ENST00000445346 PDCD7Q8N8D1 485 aaKnown RBP12.52□□□□□ -0.41
LINC02549-201ENST00000445346 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
LINC02549-201ENST00000445346 IQGAP1P46940 1657 aa12.51□□□□□ -0.41
LINC02549-201ENST00000445346 EID1Q9Y6B2 187 aa12.51□□□□□ -0.41
LINC02549-201ENST00000445346 ABCC3O15438 1527 aa12.51□□□□□ -0.41
LINC02549-201ENST00000445346 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
LINC02549-201ENST00000445346 LRRC7Q96NW7 1537 aa12.5□□□□□ -0.41
LINC02549-201ENST00000445346 LHX8Q68G74 356 aa12.49□□□□□ -0.41
LINC02549-201ENST00000445346 LRRC9Q6ZRR7 1453 aa12.48□□□□□ -0.41
LINC02549-201ENST00000445346 SCAF11Q99590 1463 aaKnown RBP12.48□□□□□ -0.41
LINC02549-201ENST00000445346 LTKP29376 864 aa12.48□□□□□ -0.41
LINC02549-201ENST00000445346 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
LINC02549-201ENST00000445346 IER5LQ5T953 404 aa12.48□□□□□ -0.41
LINC02549-201ENST00000445346 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
LINC02549-201ENST00000445346 ZC3H13Q5T200 1668 aaKnown RBP12.48□□□□□ -0.41
LINC02549-201ENST00000445346 RNF17Q9BXT8 1623 aaKnown RBP12.48□□□□□ -0.41
LINC02549-201ENST00000445346 ALKQ9UM73 1620 aa12.48□□□□□ -0.41
LINC02549-201ENST00000445346 KANK4Q5T7N3 995 aaPredicted RBP12.47□□□□□ -0.41
LINC02549-201ENST00000445346 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
LINC02549-201ENST00000445346 MS4A4AQ96JQ5 239 aa12.46□□□□□ -0.41
LINC02549-201ENST00000445346 STK24Q9Y6E0 443 aa12.46□□□□□ -0.41
LINC02549-201ENST00000445346 MAST1Q9Y2H9 1570 aa12.46□□□□□ -0.42
LINC02549-201ENST00000445346 MYOM3Q5VTT5 1437 aa12.45□□□□□ -0.42
LINC02549-201ENST00000445346 VPS8Q8N3P4 1428 aa12.45□□□□□ -0.42
LINC02549-201ENST00000445346 EIF2AK4Q9P2K8 1649 aaKnown RBP12.45□□□□□ -0.42
LINC02549-201ENST00000445346 SYNMO15061 1565 aa12.45□□□□□ -0.42
LINC02549-201ENST00000445346 STK25O00506 426 aa12.45□□□□□ -0.42
LINC02549-201ENST00000445346 CFAP65Q6ZU64 1925 aaKnown RBP12.45□□□□□ -0.42
LINC02549-201ENST00000445346 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
LINC02549-201ENST00000445346 DUOX2Q9NRD8 1548 aa12.44□□□□□ -0.42
LINC02549-201ENST00000445346 LOC105371045A0A1W2PR82 267 aa12.44□□□□□ -0.42
LINC02549-201ENST00000445346 KANK1Q14678 1352 aa12.43□□□□□ -0.42
LINC02549-201ENST00000445346 KIF15Q9NS87 1388 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms