RNA–Protein interactions for RNA: ENST00000444685.1

CBX1-204, Transcript of chromobox 1, humanhuman

TSL 5

Gene CBX1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-204ENST00000444685 TSPY10P0CW01 314 aa8.25□□□□□ -1.09
CBX1-204ENST00000444685 ATN1P54259 1190 aaPredicted RBP8.25□□□□□ -1.09
CBX1-204ENST00000444685 IFNLR1Q8IU57 520 aaPredicted RBP8.25□□□□□ -1.09
CBX1-204ENST00000444685 MS4A3Q96HJ5 214 aa8.25□□□□□ -1.09
CBX1-204ENST00000444685 DHX29Q7Z478 1369 aaKnown RBP8.24□□□□□ -1.09
CBX1-204ENST00000444685 NPHP4O75161 1426 aaPredicted RBP8.24□□□□□ -1.09
CBX1-204ENST00000444685 MIA2Q96PC5 1412 aa8.24□□□□□ -1.09
CBX1-204ENST00000444685 DNMT1P26358 1616 aaKnown RBP8.24□□□□□ -1.09
CBX1-204ENST00000444685 SYCP2Q9BX26 1530 aa8.24□□□□□ -1.09
CBX1-204ENST00000444685 GPATCH8Q9UKJ3 1502 aaKnown RBP8.24□□□□□ -1.09
CBX1-204ENST00000444685 PAK3O75914 559 aaPredicted RBP8.23□□□□□ -1.09
CBX1-204ENST00000444685 RGS17Q9UGC6 210 aaPredicted RBP8.23□□□□□ -1.09
CBX1-204ENST00000444685 EID1Q9Y6B2 187 aa8.23□□□□□ -1.09
CBX1-204ENST00000444685 MTUS2Q5JR59 1369 aa8.22□□□□□ -1.09
CBX1-204ENST00000444685 TXNDC2Q86VQ3 553 aa8.22□□□□□ -1.09
CBX1-204ENST00000444685 CDC42BPAQ5VT25 1732 aa8.22□□□□□ -1.09
CBX1-204ENST00000444685 NLRP1Q9C000 1473 aa8.21□□□□□ -1.09
CBX1-204ENST00000444685 STAG3Q9UJ98 1225 aa8.21□□□□□ -1.1
CBX1-204ENST00000444685 ZNF644Q9H582 1327 aaPredicted RBP8.21□□□□□ -1.1
CBX1-204ENST00000444685 RTEL1-TNFRSF6BF6WH68 1400 aa8.2□□□□□ -1.1
CBX1-204ENST00000444685 UGGT1Q9NYU2 1555 aa8.2□□□□□ -1.1
CBX1-204ENST00000444685 POTEAQ6S8J7 498 aa8.2□□□□□ -1.1
CBX1-204ENST00000444685 SLAIN1Q8ND83 568 aa8.2□□□□□ -1.1
CBX1-204ENST00000444685 TMEM121BQ9BXQ6 578 aaPredicted RBP8.2□□□□□ -1.1
CBX1-204ENST00000444685 ADGBQ8N7X0 1667 aa8.2□□□□□ -1.1
CBX1-204ENST00000444685 POLR1AO95602 1720 aaPredicted RBP8.2□□□□□ -1.1
CBX1-204ENST00000444685 MED14O60244 1454 aa8.19□□□□□ -1.1
CBX1-204ENST00000444685 PZPP20742 1482 aa8.19□□□□□ -1.1
CBX1-204ENST00000444685 MARVELD3Q96A59 401 aa8.19□□□□□ -1.1
CBX1-204ENST00000444685 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
CBX1-204ENST00000444685 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
CBX1-204ENST00000444685 LRRC7Q96NW7 1537 aa8.19□□□□□ -1.1
CBX1-204ENST00000444685 PLXNC1O60486 1568 aa8.18□□□□□ -1.1
CBX1-204ENST00000444685 LRRIQ1Q96JM4 1722 aa8.18□□□□□ -1.1
CBX1-204ENST00000444685 PROSER2Q86WR7 435 aaPredicted RBP8.18□□□□□ -1.1
CBX1-204ENST00000444685 BCANQ96GW7 911 aa8.18□□□□□ -1.1
CBX1-204ENST00000444685 FYCO1Q9BQS8 1478 aa8.18□□□□□ -1.1
CBX1-204ENST00000444685 VWDEQ8N2E2 1590 aa8.18□□□□□ -1.1
CBX1-204ENST00000444685 MEX3CQ5U5Q3 659 aaKnown RBP8.17□□□□□ -1.1
CBX1-204ENST00000444685 FAM135BQ49AJ0 1406 aa8.17□□□□□ -1.1
CBX1-204ENST00000444685 NEURL4Q96JN8 1562 aa8.17□□□□□ -1.1
CBX1-204ENST00000444685 INO80Q9ULG1 1556 aaPredicted RBP8.17□□□□□ -1.1
CBX1-204ENST00000444685 DEPDC5O75140 1603 aa8.17□□□□□ -1.1
CBX1-204ENST00000444685 ZNF772Q68DY9 489 aaPredicted RBP8.16□□□□□ -1.1
CBX1-204ENST00000444685 KDM5DQ9BY66 1539 aa8.16□□□□□ -1.1
CBX1-204ENST00000444685 CREBZFQ9NS37 354 aa8.16□□□□□ -1.1
CBX1-204ENST00000444685 IQGAP1P46940 1657 aa8.15□□□□□ -1.1
CBX1-204ENST00000444685 LTKP29376 864 aa8.15□□□□□ -1.1
CBX1-204ENST00000444685 PLCB2Q00722 1185 aa8.15□□□□□ -1.1
CBX1-204ENST00000444685 MBD5Q9P267 1494 aa8.14□□□□□ -1.11
CBX1-204ENST00000444685 KCNA6P17658 529 aa8.14□□□□□ -1.11
CBX1-204ENST00000444685 SLAIN2Q9P270 581 aa8.14□□□□□ -1.11
CBX1-204ENST00000444685 COLQQ9Y215 455 aaPredicted RBP8.14□□□□□ -1.11
CBX1-204ENST00000444685 RNF17Q9BXT8 1623 aaKnown RBP8.14□□□□□ -1.11
CBX1-204ENST00000444685 HDGFP51858 240 aaKnown RBP8.13□□□□□ -1.11
CBX1-204ENST00000444685 UPF1Q92900 1129 aaKnown RBP eCLIP8.13□□□□□ -1.11
CBX1-204ENST00000444685 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
CBX1-204ENST00000444685 SCAF11Q99590 1463 aaKnown RBP8.13□□□□□ -1.11
CBX1-204ENST00000444685 TMEM94Q12767 1356 aa8.12□□□□□ -1.11
CBX1-204ENST00000444685 ALKQ9UM73 1620 aa8.12□□□□□ -1.11
CBX1-204ENST00000444685 RXRBP28702 533 aa8.12□□□□□ -1.11
CBX1-204ENST00000444685 C14orf37Q86TY3 774 aa8.12□□□□□ -1.11
CBX1-204ENST00000444685 CCDC141Q6ZP82 1450 aa8.12□□□□□ -1.11
CBX1-204ENST00000444685 JCADQ9P266 1359 aa8.11□□□□□ -1.11
CBX1-204ENST00000444685 SYNMO15061 1565 aa8.11□□□□□ -1.11
CBX1-204ENST00000444685 SLC26A8Q96RN1 970 aa8.11□□□□□ -1.11
CBX1-204ENST00000444685 CFAP65Q6ZU64 1925 aaKnown RBP8.11□□□□□ -1.11
CBX1-204ENST00000444685 MSH6P52701 1360 aa8.1□□□□□ -1.11
CBX1-204ENST00000444685 RBM33Q96EV2 1170 aaKnown RBP8.1□□□□□ -1.11
CBX1-204ENST00000444685 SPATA31A6Q5VVP1 1343 aa8.09□□□□□ -1.11
CBX1-204ENST00000444685 CEP162Q5TB80 1403 aa8.09□□□□□ -1.11
CBX1-204ENST00000444685 STRCP1A6NGW2 1772 aa8.09□□□□□ -1.11
CBX1-204ENST00000444685 KANK1Q14678 1352 aa8.09□□□□□ -1.12
CBX1-204ENST00000444685 ATF3P18847 181 aa8.08□□□□□ -1.12
CBX1-204ENST00000444685 HAP1P54257 671 aaPredicted RBP8.08□□□□□ -1.12
CBX1-204ENST00000444685 KLHL34Q8N239 644 aa8.08□□□□□ -1.12
CBX1-204ENST00000444685 TMEM2Q9UHN6 1383 aa8.08□□□□□ -1.12
CBX1-204ENST00000444685 ERVK-7P63135 1459 aa8.07□□□□□ -1.12
CBX1-204ENST00000444685 LRRC9Q6ZRR7 1453 aa8.07□□□□□ -1.12
CBX1-204ENST00000444685 NUTM2BA6NNL0 878 aaPredicted RBP8.07□□□□□ -1.12
CBX1-204ENST00000444685 NUTM2EB1AL46 878 aaPredicted RBP8.07□□□□□ -1.12
CBX1-204ENST00000444685 PPP1R15AO75807 674 aaPredicted RBP8.07□□□□□ -1.12
CBX1-204ENST00000444685 SEC24BO95487 1268 aa8.07□□□□□ -1.12
CBX1-204ENST00000444685 IDI1Q13907 227 aa8.07□□□□□ -1.12
CBX1-204ENST00000444685 NUTM2AQ8IVF1 878 aaPredicted RBP8.07□□□□□ -1.12
CBX1-204ENST00000444685 CAMSAP2Q08AD1 1489 aa8.06□□□□□ -1.12
CBX1-204ENST00000444685 TIAM1Q13009 1591 aa8.06□□□□□ -1.12
CBX1-204ENST00000444685 POTEB3A0JP26 581 aa8.06□□□□□ -1.12
CBX1-204ENST00000444685 POTEBQ6S5H4 581 aa8.06□□□□□ -1.12
CBX1-204ENST00000444685 CADPS2Q86UW7 1296 aa8.06□□□□□ -1.12
CBX1-204ENST00000444685 RRP7BPQ9NSQ0 103 aa8.06□□□□□ -1.12
CBX1-204ENST00000444685 SLC52A1Q9NWF4 448 aa8.06□□□□□ -1.12
CBX1-204ENST00000444685 ABCC3O15438 1527 aa8.06□□□□□ -1.12
CBX1-204ENST00000444685 EHBP1L1Q8N3D4 1523 aa8.06□□□□□ -1.12
CBX1-204ENST00000444685 SLIT1O75093 1534 aa8.05□□□□□ -1.12
CBX1-204ENST00000444685 NUTM2DQ5VT03 806 aaPredicted RBP8.05□□□□□ -1.12
CBX1-204ENST00000444685 C19orf44Q9H6X5 657 aa8.05□□□□□ -1.12
CBX1-204ENST00000444685 NCOA2Q15596 1464 aa8.05□□□□□ -1.12
CBX1-204ENST00000444685 ARHGAP23Q9P227 1491 aa8.05□□□□□ -1.12
CBX1-204ENST00000444685 ROBO1Q9Y6N7 1651 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms