RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 NBPF1Q3BBV0 1214 aa6.2□□□□□ -1.42
HERC1-201ENST00000443617 CFAP53Q96M91 514 aa6.2□□□□□ -1.42
HERC1-201ENST00000443617 CHMP4BQ9H444 224 aaKnown RBP6.2□□□□□ -1.42
HERC1-201ENST00000443617 DMTNQ08495 405 aa6.2□□□□□ -1.42
HERC1-201ENST00000443617 PARD3Q8TEW0 1356 aa6.2□□□□□ -1.42
HERC1-201ENST00000443617 PPP1R9BQ96SB3 815 aa6.2□□□□□ -1.42
HERC1-201ENST00000443617 UTP14CQ5TAP6 766 aaKnown RBP6.2□□□□□ -1.42
HERC1-201ENST00000443617 ROCK1Q13464 1354 aa6.2□□□□□ -1.42
HERC1-201ENST00000443617 RABEP1Q15276 862 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 RAB3GAP1Q15042 981 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 RARSP54136 660 aaKnown RBP6.19□□□□□ -1.42
HERC1-201ENST00000443617 FOXD4L5Q5VV16 416 aaPredicted RBP6.19□□□□□ -1.42
HERC1-201ENST00000443617 FOXD4L4Q8WXT5 416 aaPredicted RBP6.19□□□□□ -1.42
HERC1-201ENST00000443617 KIF3AQ9Y496 699 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 PRPF40AO75400 957 aaKnown RBP6.19□□□□□ -1.42
HERC1-201ENST00000443617 TSPY26PQ9H489 355 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 CWC22Q9HCG8 908 aaKnown RBP6.19□□□□□ -1.42
HERC1-201ENST00000443617 FGD5Q6ZNL6 1462 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 FYCO1Q9BQS8 1478 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 SSFA2P28290 1259 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 CBX1P83916 185 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 PRDM4Q9UKN5 801 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 ANKRD30AQ9BXX3 1397 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 AMER1Q5JTC6 1135 aaPredicted RBP6.19□□□□□ -1.42
HERC1-201ENST00000443617 BCL2L13Q9BXK5 485 aa6.19□□□□□ -1.42
HERC1-201ENST00000443617 NAP1L2Q9ULW6 460 aaPredicted RBP6.18□□□□□ -1.42
HERC1-201ENST00000443617 RNF214Q8ND24 703 aa6.18□□□□□ -1.42
HERC1-201ENST00000443617 KLHL40Q2TBA0 621 aa6.18□□□□□ -1.42
HERC1-201ENST00000443617 NINLQ9Y2I6 1382 aa6.18□□□□□ -1.42
HERC1-201ENST00000443617 SMC4Q9NTJ3 1288 aa6.18□□□□□ -1.42
HERC1-201ENST00000443617 PER1O15534 1290 aaPredicted RBP6.18□□□□□ -1.42
HERC1-201ENST00000443617 ZSCAN23Q3MJ62 389 aa6.18□□□□□ -1.42
HERC1-201ENST00000443617 ZNF500O60304 480 aaPredicted RBP6.18□□□□□ -1.42
HERC1-201ENST00000443617 WWC1Q8IX03 1113 aa6.18□□□□□ -1.42
HERC1-201ENST00000443617 BAG4O95429 457 aaKnown RBP6.18□□□□□ -1.42
HERC1-201ENST00000443617 RBM25P49756 843 aaKnown RBP6.18□□□□□ -1.42
HERC1-201ENST00000443617 K7ELQ4 463 aaPredicted RBP6.17□□□□□ -1.42
HERC1-201ENST00000443617 CFAP44Q96MT7 982 aa6.17□□□□□ -1.42
HERC1-201ENST00000443617 ANKRD45Q5TZF3 282 aa6.17□□□□□ -1.42
HERC1-201ENST00000443617 KIF20AO95235 890 aa6.17□□□□□ -1.42
HERC1-201ENST00000443617 MPNDQ8N594 471 aa6.17□□□□□ -1.42
HERC1-201ENST00000443617 DIAPH3Q9NSV4 1193 aa6.17□□□□□ -1.42
HERC1-201ENST00000443617 ST18O60284 1047 aa6.17□□□□□ -1.42
HERC1-201ENST00000443617 HDAC1Q13547 482 aaPredicted RBP6.17□□□□□ -1.42
HERC1-201ENST00000443617 PRIMPOLQ96LW4 560 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 RBSNQ9H1K0 784 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 CFTRP13569 1480 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 LETM1O95202 739 aaPredicted RBP6.16□□□□□ -1.42
HERC1-201ENST00000443617 WDR63Q8IWG1 891 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 TOP2BQ02880 1626 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 KCNJ4P48050 445 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 TPRNQ4KMQ1 711 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 PLEKHD1A6NEE1 506 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 PLEKHH1Q9ULM0 1364 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 KIAA1107Q9UPP5 1409 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 RLBP1P12271 317 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 PRIM1P49642 420 aaKnown RBP6.16□□□□□ -1.42
HERC1-201ENST00000443617 PLCB2Q00722 1185 aa6.16□□□□□ -1.42
HERC1-201ENST00000443617 U2AF1L5P0DN76 240 aaPredicted RBP6.16□□□□□ -1.42
HERC1-201ENST00000443617 U2AF1Q01081 240 aaKnown RBP eCLIP6.16□□□□□ -1.421e-7■■□□□ 11.4
HERC1-201ENST00000443617 MVPQ14764 893 aaKnown RBP6.16□□□□□ -1.42
HERC1-201ENST00000443617 ZKSCAN5Q9Y2L8 839 aa6.15□□□□□ -1.42
HERC1-201ENST00000443617 LNPKQ9C0E8 428 aa6.15□□□□□ -1.42
HERC1-201ENST00000443617 TNNT3P45378 269 aaPredicted RBP6.15□□□□□ -1.42
HERC1-201ENST00000443617 TPM3P06753 285 aa6.15□□□□□ -1.42
HERC1-201ENST00000443617 DRC7Q8IY82 874 aa6.15□□□□□ -1.42
HERC1-201ENST00000443617 PDCL2Q8N4E4 241 aa6.15□□□□□ -1.42
HERC1-201ENST00000443617 MYRIPQ8NFW9 859 aa6.15□□□□□ -1.42
HERC1-201ENST00000443617 DDX19BQ9UMR2 479 aa6.15□□□□□ -1.42
HERC1-201ENST00000443617 MBD3O95983 291 aa6.15□□□□□ -1.43
HERC1-201ENST00000443617 NUCB1Q02818 461 aa6.15□□□□□ -1.43
HERC1-201ENST00000443617 SPDYE4A6NLX3 237 aa6.15□□□□□ -1.43
HERC1-201ENST00000443617 ZNF445P59923 1031 aa6.15□□□□□ -1.43
HERC1-201ENST00000443617 CDC45O75419 566 aa6.15□□□□□ -1.43
HERC1-201ENST00000443617 TRMT2AQ8IZ69 625 aaKnown RBP6.15□□□□□ -1.43
HERC1-201ENST00000443617 CGNQ9P2M7 1197 aaKnown RBP6.15□□□□□ -1.43
HERC1-201ENST00000443617 RUNDC1Q96C34 613 aa6.15□□□□□ -1.43
HERC1-201ENST00000443617 KIF16BQ96L93 1317 aa6.14□□□□□ -1.43
HERC1-201ENST00000443617 SYCE3A1L190 88 aa6.14□□□□□ -1.43
HERC1-201ENST00000443617 SPINK5Q9NQ38 1064 aaPredicted RBP6.14□□□□□ -1.43
HERC1-201ENST00000443617 PLEKHH2Q8IVE3 1493 aa6.14□□□□□ -1.43
HERC1-201ENST00000443617 RPRD2Q5VT52 1461 aaKnown RBP6.14□□□□□ -1.43
HERC1-201ENST00000443617 GOLGA6L6A8MZA4 724 aa6.14□□□□□ -1.43
HERC1-201ENST00000443617 PDIA4P13667 645 aaKnown RBP6.14□□□□□ -1.43
HERC1-201ENST00000443617 CT47B1P0C2W7 299 aaPredicted RBP6.14□□□□□ -1.43
HERC1-201ENST00000443617 BCL11BQ9C0K0 894 aaPredicted RBP6.14□□□□□ -1.43
HERC1-201ENST00000443617 TSC1Q92574 1164 aa6.14□□□□□ -1.43
HERC1-201ENST00000443617 REC8O95072 547 aa6.14□□□□□ -1.43
HERC1-201ENST00000443617 TCP11L2Q8N4U5 519 aa6.13□□□□□ -1.43
HERC1-201ENST00000443617 RBM27Q9P2N5 1060 aaKnown RBP6.13□□□□□ -1.43
HERC1-201ENST00000443617 BLMP54132 1417 aaPredicted RBP6.13□□□□□ -1.43
HERC1-201ENST00000443617 NOB1Q9ULX3 412 aaKnown RBP6.13□□□□□ -1.43
HERC1-201ENST00000443617 NOLC1Q14978 699 aaKnown RBP eCLIP6.13□□□□□ -1.43
HERC1-201ENST00000443617 ZNF521Q96K83 1311 aa6.13□□□□□ -1.43
HERC1-201ENST00000443617 CHD1LQ86WJ1 897 aa6.13□□□□□ -1.43
HERC1-201ENST00000443617 TESK2Q96S53 571 aa6.13□□□□□ -1.43
HERC1-201ENST00000443617 PEG3Q9GZU2 1588 aa6.13□□□□□ -1.43
HERC1-201ENST00000443617 PTPN23Q9H3S7 1636 aa6.13□□□□□ -1.43
HERC1-201ENST00000443617 STAC3Q96MF2 364 aa6.13□□□□□ -1.43
HERC1-201ENST00000443617 CCDC66A2RUB6 948 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms