RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
LINC00299-202ENST00000442956 ESF1Q9H501 851 aaKnown RBP20.31■□□□□ 0.84
LINC00299-202ENST00000442956 IFT172Q9UG01 1749 aa20.3■□□□□ 0.84
LINC00299-202ENST00000442956 NRXN1Q9ULB1 1477 aa20.3■□□□□ 0.84
LINC00299-202ENST00000442956 POLR3GLQ9BT43 218 aa20.3■□□□□ 0.84
LINC00299-202ENST00000442956 POLR1AO95602 1720 aaPredicted RBP20.29■□□□□ 0.84
LINC00299-202ENST00000442956 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
LINC00299-202ENST00000442956 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
LINC00299-202ENST00000442956 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
LINC00299-202ENST00000442956 TESK2Q96S53 571 aa20.26■□□□□ 0.83
LINC00299-202ENST00000442956 SCAF11Q99590 1463 aaKnown RBP20.26■□□□□ 0.83
LINC00299-202ENST00000442956 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
LINC00299-202ENST00000442956 PIK3C2GO75747 1445 aa20.24■□□□□ 0.83
LINC00299-202ENST00000442956 PPLO60437 1756 aa20.24■□□□□ 0.83
LINC00299-202ENST00000442956 VGFO15240 615 aaPredicted RBP20.24■□□□□ 0.83
LINC00299-202ENST00000442956 SPATA31D1Q6ZQQ2 1576 aa20.23■□□□□ 0.83
LINC00299-202ENST00000442956 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
LINC00299-202ENST00000442956 NEXMIFQ5QGS0 1516 aa20.23■□□□□ 0.83
LINC00299-202ENST00000442956 TMEM131LA2VDJ0 1609 aa20.22■□□□□ 0.83
LINC00299-202ENST00000442956 IQGAP1P46940 1657 aa20.22■□□□□ 0.83
LINC00299-202ENST00000442956 C14orf93Q9H972 538 aaKnown RBP20.21■□□□□ 0.83
LINC00299-202ENST00000442956 CCER2I3L3R5 266 aa20.21■□□□□ 0.83
LINC00299-202ENST00000442956 STAG3Q9UJ98 1225 aa20.21■□□□□ 0.83
LINC00299-202ENST00000442956 EIF3AQ14152 1382 aaKnown RBP20.19■□□□□ 0.82
LINC00299-202ENST00000442956 DISP3Q9P2K9 1392 aa20.19■□□□□ 0.82
LINC00299-202ENST00000442956 TMF1P82094 1093 aa20.19■□□□□ 0.82
LINC00299-202ENST00000442956 ZFYVE9O95405 1425 aa20.18■□□□□ 0.82
LINC00299-202ENST00000442956 CENPBP07199 599 aaPredicted RBP20.18■□□□□ 0.82
LINC00299-202ENST00000442956 SETBP1Q9Y6X0 1596 aa20.16■□□□□ 0.82
LINC00299-202ENST00000442956 A2ML1A8K2U0 1454 aa20.14■□□□□ 0.81
LINC00299-202ENST00000442956 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
LINC00299-202ENST00000442956 TNRQ92752 1358 aa20.14■□□□□ 0.81
LINC00299-202ENST00000442956 PRKRIP1Q9H875 184 aaPredicted RBP20.14■□□□□ 0.81
LINC00299-202ENST00000442956 MYO5BQ9ULV0 1848 aa20.14■□□□□ 0.81
LINC00299-202ENST00000442956 ADGRB1O14514 1584 aa20.13■□□□□ 0.81
LINC00299-202ENST00000442956 TRAK1Q9UPV9 953 aa20.1■□□□□ 0.81
LINC00299-202ENST00000442956 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
LINC00299-202ENST00000442956 CEBPAP49715 358 aaPredicted RBP20.09■□□□□ 0.81
LINC00299-202ENST00000442956 CDCA8Q53HL2 280 aa20.08■□□□□ 0.81
LINC00299-202ENST00000442956 RIMS2Q9UQ26 1411 aa20.08■□□□□ 0.8
LINC00299-202ENST00000442956 SLC24A1O60721 1099 aa20.07■□□□□ 0.8
LINC00299-202ENST00000442956 CENPJQ9HC77 1338 aaPredicted RBP20.07■□□□□ 0.8
LINC00299-202ENST00000442956 CNGB1Q14028 1251 aaPredicted RBP20.05■□□□□ 0.8
LINC00299-202ENST00000442956 SBNO2Q9Y2G9 1366 aa20.05■□□□□ 0.8
LINC00299-202ENST00000442956 MYO3AQ8NEV4 1616 aa20.03■□□□□ 0.8
LINC00299-202ENST00000442956 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
LINC00299-202ENST00000442956 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.02■□□□□ 0.8
LINC00299-202ENST00000442956 PANK3Q9H999 370 aa20.02■□□□□ 0.8
LINC00299-202ENST00000442956 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
LINC00299-202ENST00000442956 FER1L4A9Z1Z3 1794 aa20.01■□□□□ 0.79
LINC00299-202ENST00000442956 NLRP1Q9C000 1473 aa20.01■□□□□ 0.79
LINC00299-202ENST00000442956 PER1O15534 1290 aaPredicted RBP20.01■□□□□ 0.79
LINC00299-202ENST00000442956 STK26Q9P289 416 aa20■□□□□ 0.79
LINC00299-202ENST00000442956 ALKQ9UM73 1620 aa19.99■□□□□ 0.79
LINC00299-202ENST00000442956 CCDC184Q52MB2 194 aa19.99■□□□□ 0.79
LINC00299-202ENST00000442956 C3P01024 1663 aa19.99■□□□□ 0.79
LINC00299-202ENST00000442956 HDGFP51858 240 aaKnown RBP19.99■□□□□ 0.79
LINC00299-202ENST00000442956 TMEM2Q9UHN6 1383 aa19.98■□□□□ 0.79
LINC00299-202ENST00000442956 YTHDC2Q9H6S0 1430 aaKnown RBP19.97■□□□□ 0.79
LINC00299-202ENST00000442956 MRS2Q9HD23 443 aa19.97■□□□□ 0.79
LINC00299-202ENST00000442956 KDM5AP29375 1690 aaKnown RBP19.97■□□□□ 0.79
LINC00299-202ENST00000442956 UBR1Q8IWV7 1749 aa19.95■□□□□ 0.78
LINC00299-202ENST00000442956 QRICH2Q9H0J4 1663 aa19.95■□□□□ 0.78
LINC00299-202ENST00000442956 KTN1Q86UP2 1357 aaKnown RBP19.94■□□□□ 0.78
LINC00299-202ENST00000442956 RALBP1Q15311 655 aa19.94■□□□□ 0.78
LINC00299-202ENST00000442956 ARHGEF28Q8N1W1 1705 aaKnown RBP19.94■□□□□ 0.78
LINC00299-202ENST00000442956 PTPRMP28827 1452 aa19.94■□□□□ 0.78
LINC00299-202ENST00000442956 SAFB2Q14151 953 aaKnown RBP eCLIP19.93■□□□□ 0.78
LINC00299-202ENST00000442956 PRAM1Q96QH2 718 aa19.91■□□□□ 0.78
LINC00299-202ENST00000442956 BCANQ96GW7 911 aa19.9■□□□□ 0.78
LINC00299-202ENST00000442956 POGKQ9P215 609 aa19.9■□□□□ 0.78
LINC00299-202ENST00000442956 KNSTRNQ9Y448 316 aa19.9■□□□□ 0.78
LINC00299-202ENST00000442956 EVC2Q86UK5 1308 aa19.9■□□□□ 0.78
LINC00299-202ENST00000442956 PARD3Q8TEW0 1356 aa19.9■□□□□ 0.78
LINC00299-202ENST00000442956 NRXN3Q9Y4C0 1643 aa19.9■□□□□ 0.78
LINC00299-202ENST00000442956 CC2D1BQ5T0F9 858 aaKnown RBP19.9■□□□□ 0.78
LINC00299-202ENST00000442956 MYOM1P52179 1685 aa19.89■□□□□ 0.78
LINC00299-202ENST00000442956 MYBBP1AQ9BQG0 1328 aaKnown RBP19.89■□□□□ 0.78
LINC00299-202ENST00000442956 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.78
LINC00299-202ENST00000442956 LTKP29376 864 aa19.89■□□□□ 0.77
LINC00299-202ENST00000442956 TXNDC2Q86VQ3 553 aa19.88■□□□□ 0.77
LINC00299-202ENST00000442956 METP08581 1390 aa19.88■□□□□ 0.77
LINC00299-202ENST00000442956 RIMS1Q86UR5 1692 aaKnown RBP19.87■□□□□ 0.77
LINC00299-202ENST00000442956 SETD1AO15047 1707 aaKnown RBP19.87■□□□□ 0.77
LINC00299-202ENST00000442956 FAM9BQ8IZU0 186 aa19.87■□□□□ 0.77
LINC00299-202ENST00000442956 THEMISQ8N1K5 641 aaPredicted RBP19.87■□□□□ 0.77
LINC00299-202ENST00000442956 EID1Q9Y6B2 187 aa19.87■□□□□ 0.77
LINC00299-202ENST00000442956 TULP4Q9NRJ4 1543 aa19.87■□□□□ 0.77
LINC00299-202ENST00000442956 PUS7Q96PZ0 661 aaKnown RBP19.86■□□□□ 0.77
LINC00299-202ENST00000442956 ABCC11Q96J66 1382 aa19.86■□□□□ 0.77
LINC00299-202ENST00000442956 PLEKHG1Q9ULL1 1385 aa19.85■□□□□ 0.77
LINC00299-202ENST00000442956 MINK1Q8N4C8 1332 aaPredicted RBP19.85■□□□□ 0.77
LINC00299-202ENST00000442956 AMER1Q5JTC6 1135 aaPredicted RBP19.85■□□□□ 0.77
LINC00299-202ENST00000442956 TMC1Q8TDI8 760 aa19.85■□□□□ 0.77
LINC00299-202ENST00000442956 ADAMTSL3P82987 1691 aa19.85■□□□□ 0.77
LINC00299-202ENST00000442956 SLIT1O75093 1534 aa19.84■□□□□ 0.77
LINC00299-202ENST00000442956 DLC1Q96QB1 1528 aa19.84■□□□□ 0.77
LINC00299-202ENST00000442956 ARHGAP23Q9P227 1491 aa19.84■□□□□ 0.77
LINC00299-202ENST00000442956 SLC12A5Q9H2X9 1139 aa19.84■□□□□ 0.77
LINC00299-202ENST00000442956 CABP2Q9NPB3 220 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms