RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 ARID4BQ4LE39 1312 aaPredicted RBP17.35■□□□□ 0.37
SLC48A1-201ENST00000442218 FAM69CQ0P6D2 419 aa17.34■□□□□ 0.37
SLC48A1-201ENST00000442218 NUTM2DQ5VT03 806 aaPredicted RBP17.34■□□□□ 0.37
SLC48A1-201ENST00000442218 CFAP74Q9C0B2 1584 aa17.34■□□□□ 0.37
SLC48A1-201ENST00000442218 NEFMP07197 916 aa17.34■□□□□ 0.37
SLC48A1-201ENST00000442218 RGS3P49796 1198 aa17.34■□□□□ 0.37
SLC48A1-201ENST00000442218 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
SLC48A1-201ENST00000442218 MAP3K4Q9Y6R4 1608 aa17.32■□□□□ 0.36
SLC48A1-201ENST00000442218 DEPDC5O75140 1603 aa17.31■□□□□ 0.36
SLC48A1-201ENST00000442218 TNNT2P45379 298 aaPredicted RBP17.31■□□□□ 0.36
SLC48A1-201ENST00000442218 TMF1P82094 1093 aa17.31■□□□□ 0.36
SLC48A1-201ENST00000442218 NEO1Q92859 1461 aa17.31■□□□□ 0.36
SLC48A1-201ENST00000442218 PARD3Q8TEW0 1356 aa17.3■□□□□ 0.36
SLC48A1-201ENST00000442218 E9PCH4 1651 aa17.3■□□□□ 0.36
SLC48A1-201ENST00000442218 WDR43Q15061 677 aaKnown RBP eCLIP17.3■□□□□ 0.36
SLC48A1-201ENST00000442218 IL27Q8NEV9 243 aa17.3■□□□□ 0.36
SLC48A1-201ENST00000442218 BACH2Q9BYV9 841 aa17.3■□□□□ 0.36
SLC48A1-201ENST00000442218 KNSTRNQ9Y448 316 aa17.29■□□□□ 0.36
SLC48A1-201ENST00000442218 CFAP70Q5T0N1 1121 aa17.29■□□□□ 0.36
SLC48A1-201ENST00000442218 MROH1Q8NDA8 1641 aa17.28■□□□□ 0.36
SLC48A1-201ENST00000442218 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
SLC48A1-201ENST00000442218 MLH3Q9UHC1 1453 aa17.28■□□□□ 0.36
SLC48A1-201ENST00000442218 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
SLC48A1-201ENST00000442218 HECW2Q9P2P5 1572 aa17.27■□□□□ 0.36
SLC48A1-201ENST00000442218 KANK1Q14678 1352 aa17.27■□□□□ 0.36
SLC48A1-201ENST00000442218 GLI2P10070 1586 aa17.26■□□□□ 0.35
SLC48A1-201ENST00000442218 DIP2BQ9P265 1576 aa17.26■□□□□ 0.35
SLC48A1-201ENST00000442218 FRMPD1Q5SYB0 1578 aa17.26■□□□□ 0.35
SLC48A1-201ENST00000442218 ATP10AO60312 1499 aa17.26■□□□□ 0.35
SLC48A1-201ENST00000442218 VWDEQ8N2E2 1590 aa17.26■□□□□ 0.35
SLC48A1-201ENST00000442218 TSPOAP1O95153 1857 aa17.26■□□□□ 0.35
SLC48A1-201ENST00000442218 EIF2AK4Q9P2K8 1649 aaKnown RBP17.26■□□□□ 0.35
SLC48A1-201ENST00000442218 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
SLC48A1-201ENST00000442218 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
SLC48A1-201ENST00000442218 GGT6Q6P531 493 aa17.25■□□□□ 0.35
SLC48A1-201ENST00000442218 PPP2R1AP30153 589 aa17.25■□□□□ 0.35
SLC48A1-201ENST00000442218 PLEKHH1Q9ULM0 1364 aa17.24■□□□□ 0.35
SLC48A1-201ENST00000442218 PRDM15P57071 1507 aaPredicted RBP17.24■□□□□ 0.35
SLC48A1-201ENST00000442218 TET3O43151 1660 aa17.23■□□□□ 0.35
SLC48A1-201ENST00000442218 UGGT1Q9NYU2 1555 aa17.23■□□□□ 0.35
SLC48A1-201ENST00000442218 APAF1O14727 1248 aa17.23■□□□□ 0.35
SLC48A1-201ENST00000442218 BCAR3O75815 825 aa17.23■□□□□ 0.35
SLC48A1-201ENST00000442218 RICTORQ6R327 1708 aa17.22■□□□□ 0.35
SLC48A1-201ENST00000442218 ADGRF5Q8IZF2 1346 aa17.22■□□□□ 0.35
SLC48A1-201ENST00000442218 DMRT2Q9Y5R5 561 aa17.22■□□□□ 0.35
SLC48A1-201ENST00000442218 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
SLC48A1-201ENST00000442218 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
SLC48A1-201ENST00000442218 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
SLC48A1-201ENST00000442218 PTPRTO14522 1441 aa17.21■□□□□ 0.35
SLC48A1-201ENST00000442218 RRP7AQ9Y3A4 280 aaKnown RBP17.21■□□□□ 0.34
SLC48A1-201ENST00000442218 SPHKAPQ2M3C7 1700 aa17.2■□□□□ 0.34
SLC48A1-201ENST00000442218 TMEM132EQ6IEE7 984 aa17.2■□□□□ 0.34
SLC48A1-201ENST00000442218 TRPM2O94759 1503 aa17.19■□□□□ 0.34
SLC48A1-201ENST00000442218 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
SLC48A1-201ENST00000442218 CEP152O94986 1710 aa17.19■□□□□ 0.34
SLC48A1-201ENST00000442218 DUSP27Q5VZP5 1158 aa17.19■□□□□ 0.34
SLC48A1-201ENST00000442218 CLTCL1P53675 1640 aa17.19■□□□□ 0.34
SLC48A1-201ENST00000442218 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
SLC48A1-201ENST00000442218 PPRC1Q5VV67 1664 aaKnown RBP17.18■□□□□ 0.34
SLC48A1-201ENST00000442218 RNF17Q9BXT8 1623 aaKnown RBP17.18■□□□□ 0.34
SLC48A1-201ENST00000442218 COL17A1Q9UMD9 1497 aaPredicted RBP17.17■□□□□ 0.34
SLC48A1-201ENST00000442218 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
SLC48A1-201ENST00000442218 CFAP65Q6ZU64 1925 aaKnown RBP17.17■□□□□ 0.34
SLC48A1-201ENST00000442218 GOLGA2Q08379 1002 aa17.16■□□□□ 0.34
SLC48A1-201ENST00000442218 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
SLC48A1-201ENST00000442218 BCL2L13Q9BXK5 485 aa17.16■□□□□ 0.34
SLC48A1-201ENST00000442218 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
SLC48A1-201ENST00000442218 DAXXQ9UER7 740 aaPredicted RBP17.15■□□□□ 0.34
SLC48A1-201ENST00000442218 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
SLC48A1-201ENST00000442218 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
SLC48A1-201ENST00000442218 WASHC2CQ9Y4E1 1318 aa17.15■□□□□ 0.34
SLC48A1-201ENST00000442218 LMTK2Q8IWU2 1503 aa17.13■□□□□ 0.33
SLC48A1-201ENST00000442218 CANXP27824 592 aaKnown RBP17.12■□□□□ 0.33
SLC48A1-201ENST00000442218 NPATQ14207 1427 aa17.12■□□□□ 0.33
SLC48A1-201ENST00000442218 PANK1Q8TE04 598 aa17.12■□□□□ 0.33
SLC48A1-201ENST00000442218 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
SLC48A1-201ENST00000442218 KIF13AQ9H1H9 1805 aa17.11■□□□□ 0.33
SLC48A1-201ENST00000442218 TNNQ9UQP3 1299 aa17.11■□□□□ 0.33
SLC48A1-201ENST00000442218 ANO8Q9HCE9 1232 aaPredicted RBP17.1■□□□□ 0.33
SLC48A1-201ENST00000442218 COG6Q9Y2V7 657 aa17.1■□□□□ 0.33
SLC48A1-201ENST00000442218 ABCC3O15438 1527 aa17.1■□□□□ 0.33
SLC48A1-201ENST00000442218 MS4A1P11836 297 aa17.1■□□□□ 0.33
SLC48A1-201ENST00000442218 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
SLC48A1-201ENST00000442218 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
SLC48A1-201ENST00000442218 BLMP54132 1417 aaPredicted RBP17.09■□□□□ 0.33
SLC48A1-201ENST00000442218 ARXQ96QS3 562 aa17.09■□□□□ 0.33
SLC48A1-201ENST00000442218 SLC12A5Q9H2X9 1139 aa17.09■□□□□ 0.33
SLC48A1-201ENST00000442218 IGHDP01880 384 aa17.08■□□□□ 0.33
SLC48A1-201ENST00000442218 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.33
SLC48A1-201ENST00000442218 NFKBIBQ15653 356 aa17.07■□□□□ 0.32
SLC48A1-201ENST00000442218 ZMYM4Q5VZL5 1548 aa17.07■□□□□ 0.32
SLC48A1-201ENST00000442218 SLFN5Q08AF3 891 aa17.07■□□□□ 0.32
SLC48A1-201ENST00000442218 C8orf34Q49A92 452 aa17.07■□□□□ 0.32
SLC48A1-201ENST00000442218 KDM2BQ8NHM5 1336 aa17.06■□□□□ 0.32
SLC48A1-201ENST00000442218 MADDQ8WXG6 1647 aa17.05■□□□□ 0.32
SLC48A1-201ENST00000442218 SEC24BO95487 1268 aa17.05■□□□□ 0.32
SLC48A1-201ENST00000442218 CENPQQ7L2Z9 268 aaPredicted RBP17.05■□□□□ 0.32
SLC48A1-201ENST00000442218 STK26Q9P289 416 aa17.05■□□□□ 0.32
SLC48A1-201ENST00000442218 CAMSAP1Q5T5Y3 1602 aa17.04■□□□□ 0.32
SLC48A1-201ENST00000442218 FRAT2O75474 233 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms