RNA–Protein interactions for RNA: ENST00000441896.1

TNRC18P3-201, Transcript of trinucleotide repeat containing 18 pseudogene 3, humanhuman

BASIC

Gene TNRC18P3, Length 2,691 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18P3-201ENST00000441896 KDM5CP41229 1560 aa22.5■■□□□ 1.19
TNRC18P3-201ENST00000441896 UNC13BO14795 1591 aa22.49■■□□□ 1.19
TNRC18P3-201ENST00000441896 TSPOAP1O95153 1857 aa22.49■■□□□ 1.19
TNRC18P3-201ENST00000441896 FAM135AQ9P2D6 1515 aa22.48■■□□□ 1.19
TNRC18P3-201ENST00000441896 C8orf34Q49A92 452 aa22.48■■□□□ 1.19
TNRC18P3-201ENST00000441896 CDCA7LQ96GN5 454 aa22.47■■□□□ 1.19
TNRC18P3-201ENST00000441896 MLH3Q9UHC1 1453 aa22.46■■□□□ 1.19
TNRC18P3-201ENST00000441896 PPRC1Q5VV67 1664 aaKnown RBP22.46■■□□□ 1.19
TNRC18P3-201ENST00000441896 FAM161AQ3B820 660 aa22.45■■□□□ 1.19
TNRC18P3-201ENST00000441896 USP47Q96K76 1375 aa22.45■■□□□ 1.18
TNRC18P3-201ENST00000441896 NAP1L5Q96NT1 182 aaPredicted RBP22.45■■□□□ 1.18
TNRC18P3-201ENST00000441896 BRD4O60885 1362 aaPredicted RBP22.45■■□□□ 1.18
TNRC18P3-201ENST00000441896 KIF13AQ9H1H9 1805 aa22.44■■□□□ 1.18
TNRC18P3-201ENST00000441896 KDM2BQ8NHM5 1336 aa22.44■■□□□ 1.18
TNRC18P3-201ENST00000441896 HECW2Q9P2P5 1572 aa22.44■■□□□ 1.18
TNRC18P3-201ENST00000441896 MAGI2Q86UL8 1455 aa22.43■■□□□ 1.18
TNRC18P3-201ENST00000441896 KIF3BO15066 747 aa22.43■■□□□ 1.18
TNRC18P3-201ENST00000441896 HSP90AA2PQ14568 343 aaPredicted RBP22.43■■□□□ 1.18
TNRC18P3-201ENST00000441896 KTN1Q86UP2 1357 aaKnown RBP22.42■■□□□ 1.18
TNRC18P3-201ENST00000441896 PDE3BQ13370 1112 aa22.42■■□□□ 1.18
TNRC18P3-201ENST00000441896 MYBBP1AQ9BQG0 1328 aaKnown RBP22.41■■□□□ 1.18
TNRC18P3-201ENST00000441896 RICTORQ6R327 1708 aa22.41■■□□□ 1.18
TNRC18P3-201ENST00000441896 IQGAP3Q86VI3 1631 aa22.41■■□□□ 1.18
TNRC18P3-201ENST00000441896 A2MP01023 1474 aa22.4■■□□□ 1.18
TNRC18P3-201ENST00000441896 C20orf194Q5TEA3 1177 aa22.39■■□□□ 1.18
TNRC18P3-201ENST00000441896 RRP9O43818 475 aaKnown RBP22.38■■□□□ 1.17
TNRC18P3-201ENST00000441896 FRMPD1Q5SYB0 1578 aa22.38■■□□□ 1.17
TNRC18P3-201ENST00000441896 ABCA6Q8N139 1617 aa22.38■■□□□ 1.17
TNRC18P3-201ENST00000441896 HSP90AA1P07900 732 aaKnown RBP22.37■■□□□ 1.17
TNRC18P3-201ENST00000441896 L1TD1Q5T7N2 865 aaKnown RBP22.37■■□□□ 1.17
TNRC18P3-201ENST00000441896 ARID4BQ4LE39 1312 aaPredicted RBP22.36■■□□□ 1.17
TNRC18P3-201ENST00000441896 PNNQ9H307 717 aaKnown RBP22.36■■□□□ 1.17
TNRC18P3-201ENST00000441896 EIF2AK4Q9P2K8 1649 aaKnown RBP22.36■■□□□ 1.17
TNRC18P3-201ENST00000441896 DEPDC5O75140 1603 aa22.35■■□□□ 1.17
TNRC18P3-201ENST00000441896 ZNF326Q5BKZ1 582 aaKnown RBP22.35■■□□□ 1.17
TNRC18P3-201ENST00000441896 ROCK2O75116 1388 aaKnown RBP22.35■■□□□ 1.17
TNRC18P3-201ENST00000441896 CENPQQ7L2Z9 268 aaPredicted RBP22.34■■□□□ 1.17
TNRC18P3-201ENST00000441896 YEATS2Q9ULM3 1422 aa22.34■■□□□ 1.17
TNRC18P3-201ENST00000441896 ARXQ96QS3 562 aa22.33■■□□□ 1.16
TNRC18P3-201ENST00000441896 DIP2CQ9Y2E4 1556 aa22.32■■□□□ 1.16
TNRC18P3-201ENST00000441896 RALBP1Q15311 655 aa22.32■■□□□ 1.16
TNRC18P3-201ENST00000441896 DNAJC5Q9H3Z4 198 aa22.32■■□□□ 1.16
TNRC18P3-201ENST00000441896 KANK1Q14678 1352 aa22.32■■□□□ 1.16
TNRC18P3-201ENST00000441896 MROH1Q8NDA8 1641 aa22.31■■□□□ 1.16
TNRC18P3-201ENST00000441896 CLCN1P35523 988 aa22.31■■□□□ 1.16
TNRC18P3-201ENST00000441896 RGS3P49796 1198 aa22.3■■□□□ 1.16
TNRC18P3-201ENST00000441896 PRDM15P57071 1507 aaPredicted RBP22.29■■□□□ 1.16
TNRC18P3-201ENST00000441896 PLA2R1Q13018 1463 aa22.29■■□□□ 1.16
TNRC18P3-201ENST00000441896 VWDEQ8N2E2 1590 aa22.28■■□□□ 1.16
TNRC18P3-201ENST00000441896 COL17A1Q9UMD9 1497 aaPredicted RBP22.28■■□□□ 1.16
TNRC18P3-201ENST00000441896 ZMYM4Q5VZL5 1548 aa22.28■■□□□ 1.16
TNRC18P3-201ENST00000441896 XRCC6P12956 609 aaKnown RBP eCLIP22.27■■□□□ 1.16
TNRC18P3-201ENST00000441896 GGT6Q6P531 493 aa22.27■■□□□ 1.16
TNRC18P3-201ENST00000441896 SLKQ9H2G2 1235 aaPredicted RBP22.25■■□□□ 1.15
TNRC18P3-201ENST00000441896 PANK2Q9BZ23 570 aa22.25■■□□□ 1.15
TNRC18P3-201ENST00000441896 USP19O94966 1318 aa22.25■■□□□ 1.15
TNRC18P3-201ENST00000441896 NLRP13Q86W25 1043 aa22.24■■□□□ 1.15
TNRC18P3-201ENST00000441896 CCDC144AA2RUR9 1427 aa22.24■■□□□ 1.15
TNRC18P3-201ENST00000441896 RNF17Q9BXT8 1623 aaKnown RBP22.24■■□□□ 1.15
TNRC18P3-201ENST00000441896 E9PCH4 1651 aa22.24■■□□□ 1.15
TNRC18P3-201ENST00000441896 PODXL2Q9NZ53 605 aa22.24■■□□□ 1.15
TNRC18P3-201ENST00000441896 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
TNRC18P3-201ENST00000441896 TET3O43151 1660 aa22.23■■□□□ 1.15
TNRC18P3-201ENST00000441896 PLEKHG5O94827 1062 aa22.23■■□□□ 1.15
TNRC18P3-201ENST00000441896 ATP10AO60312 1499 aa22.2■■□□□ 1.14
TNRC18P3-201ENST00000441896 GOLGA6L3A6NEY3 463 aa22.2■■□□□ 1.14
TNRC18P3-201ENST00000441896 FSD2A1L4K1 749 aa22.19■■□□□ 1.14
TNRC18P3-201ENST00000441896 PARD3Q8TEW0 1356 aa22.19■■□□□ 1.14
TNRC18P3-201ENST00000441896 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
TNRC18P3-201ENST00000441896 CEP152O94986 1710 aa22.17■■□□□ 1.14
TNRC18P3-201ENST00000441896 LMTK2Q8IWU2 1503 aa22.16■■□□□ 1.14
TNRC18P3-201ENST00000441896 ANTXR1Q9H6X2 564 aa22.16■■□□□ 1.14
TNRC18P3-201ENST00000441896 EFCAB6Q5THR3 1501 aa22.16■■□□□ 1.14
TNRC18P3-201ENST00000441896 RGL3Q3MIN7 710 aa22.15■■□□□ 1.14
TNRC18P3-201ENST00000441896 CARD11Q9BXL7 1154 aa22.15■■□□□ 1.14
TNRC18P3-201ENST00000441896 PTPRTO14522 1441 aa22.15■■□□□ 1.14
TNRC18P3-201ENST00000441896 SEC24BO95487 1268 aa22.15■■□□□ 1.14
TNRC18P3-201ENST00000441896 ST20-MTHFSA0A0A6YYL1 179 aa22.14■■□□□ 1.14
TNRC18P3-201ENST00000441896 BECN1Q14457 450 aa22.14■■□□□ 1.13
TNRC18P3-201ENST00000441896 GZF1Q9H116 711 aaPredicted RBP22.14■■□□□ 1.13
TNRC18P3-201ENST00000441896 KDM2AQ9Y2K7 1162 aa22.14■■□□□ 1.13
TNRC18P3-201ENST00000441896 RALGAPBQ86X10 1494 aa22.13■■□□□ 1.13
TNRC18P3-201ENST00000441896 ABCC3O15438 1527 aa22.13■■□□□ 1.13
TNRC18P3-201ENST00000441896 TRPM2O94759 1503 aa22.13■■□□□ 1.13
TNRC18P3-201ENST00000441896 SPHKAPQ2M3C7 1700 aa22.12■■□□□ 1.13
TNRC18P3-201ENST00000441896 VIRMAQ69YN4 1812 aaKnown RBP22.12■■□□□ 1.13
TNRC18P3-201ENST00000441896 ERBB4Q15303 1308 aa22.09■■□□□ 1.13
TNRC18P3-201ENST00000441896 NPATQ14207 1427 aa22.09■■□□□ 1.13
TNRC18P3-201ENST00000441896 ARHGEF40Q8TER5 1519 aa22.09■■□□□ 1.13
TNRC18P3-201ENST00000441896 REREQ9P2R6 1566 aa22.09■■□□□ 1.13
TNRC18P3-201ENST00000441896 NLRP1Q9C000 1473 aa22.08■■□□□ 1.13
TNRC18P3-201ENST00000441896 CLTCL1P53675 1640 aa22.08■■□□□ 1.12
TNRC18P3-201ENST00000441896 UHRF1BP1Q6BDS2 1440 aa22.07■■□□□ 1.12
TNRC18P3-201ENST00000441896 SIGLEC1Q9BZZ2 1709 aa22.06■■□□□ 1.12
TNRC18P3-201ENST00000441896 INSRP06213 1382 aa22.06■■□□□ 1.12
TNRC18P3-201ENST00000441896 ESPNB1AK53 854 aa22.05■■□□□ 1.12
TNRC18P3-201ENST00000441896 DUSP27Q5VZP5 1158 aa22.05■■□□□ 1.12
TNRC18P3-201ENST00000441896 UGGT1Q9NYU2 1555 aa22.05■■□□□ 1.12
TNRC18P3-201ENST00000441896 CAMSAP1Q5T5Y3 1602 aa22.05■■□□□ 1.12
TNRC18P3-201ENST00000441896 AGLP35573 1532 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms