RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 FAM161AQ3B820 660 aa8.72□□□□□ -1.01
HMGB3P9-201ENST00000441799 BLOC1S3Q6QNY0 202 aa8.72□□□□□ -1.01
HMGB3P9-201ENST00000441799 PCDHB3Q9Y5E6 796 aa8.72□□□□□ -1.01
HMGB3P9-201ENST00000441799 TMEM134Q9H6X4 195 aa8.71□□□□□ -1.02
HMGB3P9-201ENST00000441799 PDZRN3Q9UPQ7 1066 aa8.71□□□□□ -1.02
HMGB3P9-201ENST00000441799 RNF223E7ERA6 249 aa8.7□□□□□ -1.02
HMGB3P9-201ENST00000441799 DNAJB2P25686 324 aa8.7□□□□□ -1.02
HMGB3P9-201ENST00000441799 GGCXP38435 758 aa8.7□□□□□ -1.02
HMGB3P9-201ENST00000441799 TRIM67Q6ZTA4 783 aa8.7□□□□□ -1.02
HMGB3P9-201ENST00000441799 RCCD1A6NED2 376 aa8.69□□□□□ -1.02
HMGB3P9-201ENST00000441799 SLC4A3P48751 1232 aa8.69□□□□□ -1.02
HMGB3P9-201ENST00000441799 PRR14Q9BWN1 585 aa8.69□□□□□ -1.02
HMGB3P9-201ENST00000441799 TLL1O43897 1013 aa8.68□□□□□ -1.02
HMGB3P9-201ENST00000441799 RBM46Q8TBY0 533 aaKnown RBP8.68□□□□□ -1.02
HMGB3P9-201ENST00000441799 ACTN4O43707 911 aaKnown RBP8.67□□□□□ -1.02
HMGB3P9-201ENST00000441799 SLC10A3P09131 477 aa8.67□□□□□ -1.02
HMGB3P9-201ENST00000441799 NUTM2FA1L443 756 aa8.66□□□□□ -1.02
HMGB3P9-201ENST00000441799 SLC19A1P41440 591 aa8.66□□□□□ -1.02
HMGB3P9-201ENST00000441799 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
HMGB3P9-201ENST00000441799 SEMA3EO15041 775 aa8.64□□□□□ -1.03
HMGB3P9-201ENST00000441799 S1PR4O95977 384 aa8.63□□□□□ -1.03
HMGB3P9-201ENST00000441799 CFHP08603 1231 aa8.63□□□□□ -1.03
HMGB3P9-201ENST00000441799 SPRYD7Q5W111 196 aa8.63□□□□□ -1.03
HMGB3P9-201ENST00000441799 LIAT1Q6ZQX7 453 aa8.63□□□□□ -1.03
HMGB3P9-201ENST00000441799 FCHSD2O94868 740 aa8.62□□□□□ -1.03
HMGB3P9-201ENST00000441799 KMT5BQ4FZB7 885 aa8.62□□□□□ -1.03
HMGB3P9-201ENST00000441799 ZNF787Q6DD87 383 aa8.62□□□□□ -1.03
HMGB3P9-201ENST00000441799 ANKLE1Q8NAG6 615 aa8.62□□□□□ -1.03
HMGB3P9-201ENST00000441799 PXYLP1Q8TE99 480 aa8.61□□□□□ -1.03
HMGB3P9-201ENST00000441799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.6□□□□□ -1.03
HMGB3P9-201ENST00000441799 ZNF598Q86UK7 904 aaKnown RBP8.6□□□□□ -1.03
HMGB3P9-201ENST00000441799 PLA2G2CQ5R387 149 aa8.58□□□□□ -1.04
HMGB3P9-201ENST00000441799 SCUBE3Q8IX30 993 aa8.58□□□□□ -1.04
HMGB3P9-201ENST00000441799 GDF9O60383 454 aa8.57□□□□□ -1.04
HMGB3P9-201ENST00000441799 ADH1BP00325 375 aa8.57□□□□□ -1.04
HMGB3P9-201ENST00000441799 OATP04181 439 aa8.57□□□□□ -1.04
HMGB3P9-201ENST00000441799 PRR20EP86478 221 aa8.57□□□□□ -1.04
HMGB3P9-201ENST00000441799 PRR20CP86479 221 aa8.57□□□□□ -1.04
HMGB3P9-201ENST00000441799 PRR20DP86480 221 aa8.57□□□□□ -1.04
HMGB3P9-201ENST00000441799 PRR20BP86481 221 aa8.57□□□□□ -1.04
HMGB3P9-201ENST00000441799 PRR20AP86496 221 aa8.57□□□□□ -1.04
HMGB3P9-201ENST00000441799 NR1I2O75469 434 aa8.56□□□□□ -1.04
HMGB3P9-201ENST00000441799 PUS10Q3MIT2 529 aaKnown RBP8.56□□□□□ -1.04
HMGB3P9-201ENST00000441799 METTL3Q86U44 580 aaKnown RBP8.56□□□□□ -1.04
HMGB3P9-201ENST00000441799 ZNF775Q96BV0 537 aaPredicted RBP8.56□□□□□ -1.04
HMGB3P9-201ENST00000441799 DAXXQ9UER7 740 aaPredicted RBP8.56□□□□□ -1.04
HMGB3P9-201ENST00000441799 POTECB2RU33 542 aa8.55□□□□□ -1.04
HMGB3P9-201ENST00000441799 DGAT1O75907 488 aa8.55□□□□□ -1.04
HMGB3P9-201ENST00000441799 FECHP22830 423 aa8.55□□□□□ -1.04
HMGB3P9-201ENST00000441799 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
HMGB3P9-201ENST00000441799 ZNF697Q5TEC3 545 aa8.55□□□□□ -1.04
HMGB3P9-201ENST00000441799 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
HMGB3P9-201ENST00000441799 TESPA1A2RU30 521 aaPredicted RBP8.54□□□□□ -1.04
HMGB3P9-201ENST00000441799 P3H3Q8IVL6 736 aa8.54□□□□□ -1.04
HMGB3P9-201ENST00000441799 GPR37O15354 613 aa8.53□□□□□ -1.04
HMGB3P9-201ENST00000441799 HIC1Q14526 733 aa8.53□□□□□ -1.04
HMGB3P9-201ENST00000441799 TNFRSF10AO00220 468 aa8.52□□□□□ -1.05
HMGB3P9-201ENST00000441799 PKDCCQ504Y2 493 aa8.52□□□□□ -1.05
HMGB3P9-201ENST00000441799 SPSB2Q99619 263 aa8.51□□□□□ -1.05
HMGB3P9-201ENST00000441799 PKD2L1Q9P0L9 805 aa8.51□□□□□ -1.05
HMGB3P9-201ENST00000441799 NLRP7Q8WX94 980 aa8.5□□□□□ -1.05
HMGB3P9-201ENST00000441799 THAP11Q96EK4 314 aa8.5□□□□□ -1.05
HMGB3P9-201ENST00000441799 MORN1Q5T089 497 aa8.49□□□□□ -1.05
HMGB3P9-201ENST00000441799 FAM187AA6NFU0 413 aa8.48□□□□□ -1.05
HMGB3P9-201ENST00000441799 GNPATO15228 680 aa8.48□□□□□ -1.05
HMGB3P9-201ENST00000441799 RSPH4AQ5TD94 716 aa8.48□□□□□ -1.05
HMGB3P9-201ENST00000441799 PHOX2BQ99453 314 aa8.48□□□□□ -1.05
HMGB3P9-201ENST00000441799 FAM160A2Q8N612 972 aaPredicted RBP8.47□□□□□ -1.05
HMGB3P9-201ENST00000441799 FUT2Q10981 343 aa8.46□□□□□ -1.06
HMGB3P9-201ENST00000441799 DDX11L8A8MPP1 907 aa8.45□□□□□ -1.06
HMGB3P9-201ENST00000441799 ST8SIA5O15466 376 aa8.45□□□□□ -1.06
HMGB3P9-201ENST00000441799 GCGRP47871 477 aa8.45□□□□□ -1.06
HMGB3P9-201ENST00000441799 FOXC1Q12948 553 aa8.45□□□□□ -1.06
HMGB3P9-201ENST00000441799 RDH13Q8NBN7 331 aa8.45□□□□□ -1.06
HMGB3P9-201ENST00000441799 AAASQ9NRG9 546 aa8.45□□□□□ -1.06
HMGB3P9-201ENST00000441799 SLC27A5Q9Y2P5 690 aa8.45□□□□□ -1.06
HMGB3P9-201ENST00000441799 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
HMGB3P9-201ENST00000441799 RPIAP49247 311 aa8.43□□□□□ -1.06
HMGB3P9-201ENST00000441799 BRICD5Q6PL45 260 aa8.43□□□□□ -1.06
HMGB3P9-201ENST00000441799 FCF1Q9Y324 198 aaKnown RBP8.43□□□□□ -1.06
HMGB3P9-201ENST00000441799 SMYD5Q6GMV2 418 aa8.42□□□□□ -1.06
HMGB3P9-201ENST00000441799 LMOD2Q6P5Q4 547 aa8.42□□□□□ -1.06
HMGB3P9-201ENST00000441799 TOR4AQ9NXH8 423 aa8.42□□□□□ -1.06
HMGB3P9-201ENST00000441799 PRDM9Q9NQV7 894 aa8.41□□□□□ -1.06
HMGB3P9-201ENST00000441799 DACH1Q9UI36 760 aa8.41□□□□□ -1.06
HMGB3P9-201ENST00000441799 FMNL1O95466 1100 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P9-201ENST00000441799 SALL2Q9Y467 1007 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P9-201ENST00000441799 CD2BP2O95400 341 aaKnown RBP8.39□□□□□ -1.07
HMGB3P9-201ENST00000441799 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
HMGB3P9-201ENST00000441799 RNF19BQ6ZMZ0 732 aa8.39□□□□□ -1.07
HMGB3P9-201ENST00000441799 AVPP01185 164 aa8.38□□□□□ -1.07
HMGB3P9-201ENST00000441799 PLCB2Q00722 1185 aa8.38□□□□□ -1.07
HMGB3P9-201ENST00000441799 CRIPAKQ8N1N5 446 aa8.38□□□□□ -1.07
HMGB3P9-201ENST00000441799 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
HMGB3P9-201ENST00000441799 SULF1Q8IWU6 871 aa8.36□□□□□ -1.07
HMGB3P9-201ENST00000441799 TREML4Q6UXN2 200 aa8.35□□□□□ -1.07
HMGB3P9-201ENST00000441799 ERICH6Q7L0X2 663 aa8.35□□□□□ -1.07
HMGB3P9-201ENST00000441799 CYP4X1Q8N118 509 aa8.35□□□□□ -1.07
HMGB3P9-201ENST00000441799 CD46P15529 392 aa8.33□□□□□ -1.08
HMGB3P9-201ENST00000441799 GPIHBP1Q8IV16 184 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms