RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 RIC3Q7Z5B4 369 aa8.29□□□□□ -1.08
ALMS1-IT1-201ENST00000441587 TRPC6Q9Y210 931 aa8.29□□□□□ -1.08
ALMS1-IT1-201ENST00000441587 MAP3K7O43318 606 aa8.29□□□□□ -1.08
ALMS1-IT1-201ENST00000441587 PSMD1Q99460 953 aa8.29□□□□□ -1.08
ALMS1-IT1-201ENST00000441587 PCGF6Q9BYE7 350 aa8.29□□□□□ -1.08
ALMS1-IT1-201ENST00000441587 ZEB1P37275 1124 aaPredicted RBP8.28□□□□□ -1.08
ALMS1-IT1-201ENST00000441587 EN1Q05925 392 aaPredicted RBP8.28□□□□□ -1.08
ALMS1-IT1-201ENST00000441587 ZNF592Q92610 1267 aa8.27□□□□□ -1.08
ALMS1-IT1-201ENST00000441587 PPP1R12CQ9BZL4 782 aa8.27□□□□□ -1.08
ALMS1-IT1-201ENST00000441587 UNCXA6NJT0 531 aa8.27□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 FAM161AQ3B820 660 aa8.27□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 ADAMTS19Q8TE59 1207 aa8.26□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 ANP32EQ9BTT0 268 aa8.26□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 AP1G2O75843 785 aa8.26□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 WASHC4Q2M389 1173 aa8.26□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 FAM177A1Q8N128 213 aaPredicted RBP8.26□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 ARID4BQ4LE39 1312 aaPredicted RBP8.25□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 RBM47A0AV96 593 aaKnown RBP8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 TUSC1Q2TAM9 212 aa8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 TTLL13PA6NNM8 815 aa8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 G3V3G9 751 aa8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 PPM1GO15355 546 aaPredicted RBP8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 LMOD1P29536 600 aaPredicted RBP8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 CSPP1Q1MSJ5 1256 aa8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 ZNF710Q8N1W2 664 aa8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 PXYLP1Q8TE99 480 aa8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 CCDC136Q96JN2 1154 aa8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 EPAS1Q99814 870 aa8.24□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 PALM3A6NDB9 673 aaPredicted RBP8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 TIE1P35590 1138 aa8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 RBM33Q96EV2 1170 aaKnown RBP8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 CWC22Q9HCG8 908 aaKnown RBP8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 BRPF3Q9ULD4 1205 aa8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 SPIRE2Q8WWL2 714 aa8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 MS4A3Q96HJ5 214 aa8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 TMEM121BQ9BXQ6 578 aaPredicted RBP8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 GNEQ9Y223 722 aaKnown RBP8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 BOLA1Q9Y3E2 137 aa8.23□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 TMEM88BA6NKF7 163 aa8.22□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 PHF14O94880 888 aa8.22□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 IGSF5Q9NSI5 407 aa8.22□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 SCRIBQ14160 1630 aa8.21□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 SPTLC1O15269 473 aa8.21□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 USP17L8P0C7I0 530 aa8.21□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 IRX6P78412 446 aaPredicted RBP8.21□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 B4GALNT3Q6L9W6 998 aa8.21□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 CERS3Q8IU89 383 aa8.21□□□□□ -1.09
ALMS1-IT1-201ENST00000441587 TSR1Q2NL82 804 aaKnown RBP8.21□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 NAP1L5Q96NT1 182 aaPredicted RBP8.21□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 NACADO15069 1562 aa8.2□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 ATG7O95352 703 aa8.2□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 CD44P16070 742 aaKnown RBP8.2□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 QPCTQ16769 361 aa8.2□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 ABCC9O60706 1549 aa8.2□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 A0A0U1RQG5 324 aaPredicted RBP8.2□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 FXR2P51116 673 aaKnown RBP eCLIP8.2□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 TRIM35Q9UPQ4 493 aa8.2□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 ADGRG1Q9Y653 693 aa8.2□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 LHX8Q68G74 356 aa8.19□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 PDCD7Q8N8D1 485 aaKnown RBP8.19□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 MRRFQ96E11 262 aaKnown RBP8.19□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 ANO8Q9HCE9 1232 aaPredicted RBP8.19□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 TFIP11Q9UBB9 837 aaKnown RBP8.19□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 NUTM2BA6NNL0 878 aaPredicted RBP8.18□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 NUTM2EB1AL46 878 aaPredicted RBP8.18□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 CDCA8Q53HL2 280 aa8.18□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 NUTM2DQ5VT03 806 aaPredicted RBP8.18□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 NUTM2AQ8IVF1 878 aaPredicted RBP8.18□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 LILRB3O75022 631 aa8.18□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 VAC14Q08AM6 782 aa8.18□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 NUTM1Q86Y26 1132 aa8.18□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 CCER1Q8TC90 406 aaPredicted RBP8.18□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 ERCC3P19447 782 aa8.17□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 CC2D2BQ6DHV5 1058 aa8.17□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 PADI6Q6TGC4 694 aa8.17□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 SLAIN1Q8ND83 568 aa8.17□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 RTL5Q5HYW3 569 aaPredicted RBP8.17□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 ALG2Q9H553 416 aa8.17□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 MOXD2PA6NHM9 499 aa8.15□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 CERKQ8TCT0 537 aa8.15□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 KIAA1522Q9P206 1035 aaPredicted RBP8.15□□□□□ -1.1
ALMS1-IT1-201ENST00000441587 GJA5P36382 358 aa8.15□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 PTCD2Q8WV60 388 aaKnown RBP8.15□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 BMP2KQ9NSY1 1161 aaPredicted RBP8.14□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 PCDH10Q9P2E7 1040 aa8.14□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 PCDHGA10Q9Y5H3 936 aa8.14□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 TYW1BQ6NUM6 668 aa8.14□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 TXNDC2Q86VQ3 553 aa8.14□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 PCDHB15Q9Y5E8 787 aa8.14□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 TMED8Q6PL24 325 aaPredicted RBP8.13□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 CCDC125Q86Z20 511 aa8.13□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 UCN2Q96RP3 112 aa8.13□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 CD46P15529 392 aa8.12□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 NDUFV2P19404 249 aa8.12□□□□□ -1.11
ALMS1-IT1-201ENST00000441587 ZNF526Q8TF50 670 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms