RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 ZRSR2Q15696 482 aaKnown RBP8.12□□□□□ -1.11
USP46-201ENST00000441222 ANKRD45Q5TZF3 282 aa8.12□□□□□ -1.11
USP46-201ENST00000441222 NOL8Q76FK4 1167 aaKnown RBP8.12□□□□□ -1.11
USP46-201ENST00000441222 VPS37DQ86XT2 251 aa8.12□□□□□ -1.11
USP46-201ENST00000441222 TEFQ10587 303 aa8.11□□□□□ -1.11
USP46-201ENST00000441222 C9orf78Q9NZ63 289 aaPredicted RBP8.11□□□□□ -1.11
USP46-201ENST00000441222 NUCB2P80303 420 aa8.11□□□□□ -1.11
USP46-201ENST00000441222 AAMPQ13685 434 aa8.11□□□□□ -1.11
USP46-201ENST00000441222 CWC15Q9P013 229 aaKnown RBP8.11□□□□□ -1.11
USP46-201ENST00000441222 ZKSCAN2Q63HK3 967 aa8.11□□□□□ -1.11
USP46-201ENST00000441222 EPS15P42566 896 aa8.11□□□□□ -1.11
USP46-201ENST00000441222 WASHC2AQ641Q2 1341 aa8.11□□□□□ -1.11
USP46-201ENST00000441222 XBP1P17861 261 aa8.11□□□□□ -1.11
USP46-201ENST00000441222 EVA1CP58658 441 aa8.11□□□□□ -1.11
USP46-201ENST00000441222 HSP90AB4PQ58FF6 505 aa8.1□□□□□ -1.11
USP46-201ENST00000441222 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
USP46-201ENST00000441222 DHX8Q14562 1220 aaKnown RBP8.1□□□□□ -1.11
USP46-201ENST00000441222 MAP7D2Q96T17 732 aa8.1□□□□□ -1.11
USP46-201ENST00000441222 GSE1Q14687 1217 aa8.1□□□□□ -1.11
USP46-201ENST00000441222 MYBBP1AQ9BQG0 1328 aaKnown RBP8.1□□□□□ -1.11
USP46-201ENST00000441222 TTC5Q8N0Z6 440 aa8.1□□□□□ -1.11
USP46-201ENST00000441222 DDX19BQ9UMR2 479 aa8.1□□□□□ -1.11
USP46-201ENST00000441222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.1□□□□□ -1.11
USP46-201ENST00000441222 ZNF592Q92610 1267 aa8.09□□□□□ -1.11
USP46-201ENST00000441222 PATL2C9JE40 543 aaKnown RBP8.09□□□□□ -1.11
USP46-201ENST00000441222 CLUAP1Q96AJ1 413 aa8.09□□□□□ -1.11
USP46-201ENST00000441222 BICD2Q8TD16 824 aa8.09□□□□□ -1.11
USP46-201ENST00000441222 COG3Q96JB2 828 aa8.09□□□□□ -1.11
USP46-201ENST00000441222 EVC2Q86UK5 1308 aa8.09□□□□□ -1.11
USP46-201ENST00000441222 APPP05067 770 aa8.09□□□□□ -1.11
USP46-201ENST00000441222 WASHC2CQ9Y4E1 1318 aa8.09□□□□□ -1.11
USP46-201ENST00000441222 IFIT2P09913 472 aaKnown RBP8.09□□□□□ -1.11
USP46-201ENST00000441222 ERC2O15083 957 aa8.08□□□□□ -1.12
USP46-201ENST00000441222 OFD1O75665 1012 aa8.08□□□□□ -1.12
USP46-201ENST00000441222 OLFM4Q6UX06 510 aa8.08□□□□□ -1.12
USP46-201ENST00000441222 MNS1Q8NEH6 495 aa8.08□□□□□ -1.12
USP46-201ENST00000441222 CCP110O43303 1012 aa8.08□□□□□ -1.12
USP46-201ENST00000441222 CCDC73Q6ZRK6 1079 aa8.08□□□□□ -1.12
USP46-201ENST00000441222 CWC22Q9HCG8 908 aaKnown RBP8.08□□□□□ -1.12
USP46-201ENST00000441222 FOXD4L1Q9NU39 408 aa8.08□□□□□ -1.12
USP46-201ENST00000441222 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.08□□□□□ -1.12
USP46-201ENST00000441222 SMARCA2P51531 1590 aa8.08□□□□□ -1.12
USP46-201ENST00000441222 WWC2Q6AWC2 1192 aa8.08□□□□□ -1.12
USP46-201ENST00000441222 NAP1L1P55209 391 aaKnown RBP8.08□□□□□ -1.12
USP46-201ENST00000441222 LETM1O95202 739 aaPredicted RBP8.08□□□□□ -1.12
USP46-201ENST00000441222 RAB3GAP2Q9H2M9 1393 aa8.08□□□□□ -1.12
USP46-201ENST00000441222 INTS3Q68E01 1043 aaKnown RBP8.07□□□□□ -1.12
USP46-201ENST00000441222 CHMP5Q9NZZ3 219 aa8.07□□□□□ -1.12
USP46-201ENST00000441222 DHX16O60231 1041 aaKnown RBP8.07□□□□□ -1.12
USP46-201ENST00000441222 MYO15BQ96JP2 1530 aa8.07□□□□□ -1.12
USP46-201ENST00000441222 API5Q9BZZ5 524 aaKnown RBP8.07□□□□□ -1.12
USP46-201ENST00000441222 PDS5BQ9NTI5 1447 aa8.07□□□□□ -1.12
USP46-201ENST00000441222 KIF3BO15066 747 aa8.07□□□□□ -1.12
USP46-201ENST00000441222 FOXD4L5Q5VV16 416 aaPredicted RBP8.07□□□□□ -1.12
USP46-201ENST00000441222 NFXL1Q6ZNB6 911 aa8.07□□□□□ -1.12
USP46-201ENST00000441222 FOXD4L4Q8WXT5 416 aaPredicted RBP8.07□□□□□ -1.12
USP46-201ENST00000441222 SMC3Q9UQE7 1217 aa8.07□□□□□ -1.12
USP46-201ENST00000441222 G3BP1Q13283 466 aaKnown RBP eCLIP8.07□□□□□ -1.12
USP46-201ENST00000441222 CCDC144AA2RUR9 1427 aa8.07□□□□□ -1.12
USP46-201ENST00000441222 HSP90AB2PQ58FF8 381 aa8.06□□□□□ -1.12
USP46-201ENST00000441222 RALYLQ86SE5 291 aaKnown RBP8.06□□□□□ -1.12
USP46-201ENST00000441222 ANO2Q9NQ90 1003 aa8.06□□□□□ -1.12
USP46-201ENST00000441222 KIF7Q2M1P5 1343 aa8.06□□□□□ -1.12
USP46-201ENST00000441222 VGFO15240 615 aaPredicted RBP8.06□□□□□ -1.12
USP46-201ENST00000441222 LUC7LQ9NQ29 371 aaKnown RBP8.06□□□□□ -1.12
USP46-201ENST00000441222 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.06□□□□□ -1.12
USP46-201ENST00000441222 NINLQ9Y2I6 1382 aa8.06□□□□□ -1.12
USP46-201ENST00000441222 TXLNBQ8N3L3 684 aa8.06□□□□□ -1.12
USP46-201ENST00000441222 LTV1Q96GA3 475 aaPredicted RBP8.06□□□□□ -1.12
USP46-201ENST00000441222 ERLIN2O94905 339 aa8.06□□□□□ -1.12
USP46-201ENST00000441222 CCDC146Q8IYE0 955 aa8.06□□□□□ -1.12
USP46-201ENST00000441222 ANKRD18AQ8IVF6 992 aa8.06□□□□□ -1.12
USP46-201ENST00000441222 SMARCE1Q969G3 411 aa8.05□□□□□ -1.12
USP46-201ENST00000441222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.05□□□□□ -1.12
USP46-201ENST00000441222 CAGE1Q8TC20 777 aa8.05□□□□□ -1.12
USP46-201ENST00000441222 PSMA5P28066 241 aa8.05□□□□□ -1.12
USP46-201ENST00000441222 AEBP2Q6ZN18 517 aaPredicted RBP8.05□□□□□ -1.12
USP46-201ENST00000441222 CCDC66A2RUB6 948 aa8.05□□□□□ -1.12
USP46-201ENST00000441222 PIP4K2AP48426 406 aaPredicted RBP8.05□□□□□ -1.12
USP46-201ENST00000441222 RAD21O60216 631 aa8.05□□□□□ -1.12
USP46-201ENST00000441222 PDCP20941 246 aa8.05□□□□□ -1.12
USP46-201ENST00000441222 H0YHG0 523 aa8.04□□□□□ -1.12
USP46-201ENST00000441222 SART3Q15020 963 aaKnown RBP8.04□□□□□ -1.12
USP46-201ENST00000441222 FILIP1LQ4L180 1135 aa8.04□□□□□ -1.12
USP46-201ENST00000441222 ZBED9Q6R2W3 1325 aa8.04□□□□□ -1.12
USP46-201ENST00000441222 PDE4AP27815 886 aa8.04□□□□□ -1.12
USP46-201ENST00000441222 TXLNAP40222 546 aa8.04□□□□□ -1.12
USP46-201ENST00000441222 FAM43AQ8N2R8 423 aa8.04□□□□□ -1.12
USP46-201ENST00000441222 ZFYVE27Q5T4F4 411 aa8.04□□□□□ -1.12
USP46-201ENST00000441222 MCM2P49736 904 aa8.04□□□□□ -1.12
USP46-201ENST00000441222 IFT57Q9NWB7 429 aa8.04□□□□□ -1.12
USP46-201ENST00000441222 RBM33Q96EV2 1170 aaKnown RBP8.04□□□□□ -1.12
USP46-201ENST00000441222 SYCP1Q15431 976 aa8.03□□□□□ -1.12
USP46-201ENST00000441222 STAC3Q96MF2 364 aa8.03□□□□□ -1.12
USP46-201ENST00000441222 CCDC39Q9UFE4 941 aa8.03□□□□□ -1.12
USP46-201ENST00000441222 HIP1O00291 1037 aa8.03□□□□□ -1.12
USP46-201ENST00000441222 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
USP46-201ENST00000441222 GOLGA6L7A0A1B0GV03 622 aa8.03□□□□□ -1.12
USP46-201ENST00000441222 RRP1P56182 461 aaKnown RBP8.02□□□□□ -1.12
USP46-201ENST00000441222 FOXD1Q16676 465 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms