RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 S1PR4O95977 384 aa8.03□□□□□ -1.12
LINC01549-201ENST00000440664 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
LINC01549-201ENST00000440664 CYP4X1Q8N118 509 aa8.02□□□□□ -1.13
LINC01549-201ENST00000440664 DDX27Q96GQ7 796 aaKnown RBP8.02□□□□□ -1.13
LINC01549-201ENST00000440664 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
LINC01549-201ENST00000440664 SENP2Q9HC62 589 aa8.02□□□□□ -1.13
LINC01549-201ENST00000440664 ATP13A2Q9NQ11 1180 aa8.02□□□□□ -1.13
LINC01549-201ENST00000440664 EMILIN3Q9NT22 766 aa8.02□□□□□ -1.13
LINC01549-201ENST00000440664 PNMA3Q9UL41 463 aa8.02□□□□□ -1.13
LINC01549-201ENST00000440664 NBPF26B4DH59 902 aa8.01□□□□□ -1.13
LINC01549-201ENST00000440664 CHGAP10645 457 aaKnown RBP8.01□□□□□ -1.13
LINC01549-201ENST00000440664 PCDHB3Q9Y5E6 796 aa8.01□□□□□ -1.13
LINC01549-201ENST00000440664 TATDN2Q93075 761 aa8□□□□□ -1.13
LINC01549-201ENST00000440664 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
LINC01549-201ENST00000440664 NKX1-1Q15270 411 aaPredicted RBP7.99□□□□□ -1.13
LINC01549-201ENST00000440664 IRF7Q92985 503 aa7.99□□□□□ -1.13
LINC01549-201ENST00000440664 CDCA7LQ96GN5 454 aa7.99□□□□□ -1.13
LINC01549-201ENST00000440664 LARP6Q9BRS8 491 aaKnown RBP7.99□□□□□ -1.13
LINC01549-201ENST00000440664 TOR4AQ9NXH8 423 aa7.99□□□□□ -1.13
LINC01549-201ENST00000440664 BLOC1S3Q6QNY0 202 aa7.98□□□□□ -1.13
LINC01549-201ENST00000440664 MAP3K7O43318 606 aa7.97□□□□□ -1.13
LINC01549-201ENST00000440664 TSR1Q2NL82 804 aaKnown RBP7.97□□□□□ -1.13
LINC01549-201ENST00000440664 C3orf80F5H4A9 247 aa7.96□□□□□ -1.14
LINC01549-201ENST00000440664 KCNMA1Q12791 1236 aa7.96□□□□□ -1.14
LINC01549-201ENST00000440664 PLA2G2CQ5R387 149 aa7.96□□□□□ -1.14
LINC01549-201ENST00000440664 SLF2Q8IX21 1173 aa7.96□□□□□ -1.14
LINC01549-201ENST00000440664 PRR14Q9BWN1 585 aa7.96□□□□□ -1.14
LINC01549-201ENST00000440664 PRSS12P56730 875 aa7.95□□□□□ -1.14
LINC01549-201ENST00000440664 TMEM151AQ8N4L1 468 aa7.95□□□□□ -1.14
LINC01549-201ENST00000440664 FAM198AQ9UFP1 575 aa7.95□□□□□ -1.14
LINC01549-201ENST00000440664 DDX12PQ92771 950 aa7.94□□□□□ -1.14
LINC01549-201ENST00000440664 KIFC2Q96AC6 838 aa7.94□□□□□ -1.14
LINC01549-201ENST00000440664 NXF1Q9UBU9 619 aaKnown RBP7.94□□□□□ -1.14
LINC01549-201ENST00000440664 SLC4A3P48751 1232 aa7.93□□□□□ -1.14
LINC01549-201ENST00000440664 TTC24A2A3L6 582 aaPredicted RBP7.92□□□□□ -1.14
LINC01549-201ENST00000440664 EN1Q05925 392 aaPredicted RBP7.92□□□□□ -1.14
LINC01549-201ENST00000440664 SWT1Q5T5J6 900 aaKnown RBP7.92□□□□□ -1.14
LINC01549-201ENST00000440664 NUDT18Q6ZVK8 323 aa7.92□□□□□ -1.14
LINC01549-201ENST00000440664 GDF11O95390 407 aa7.91□□□□□ -1.14
LINC01549-201ENST00000440664 AMER1Q5JTC6 1135 aaPredicted RBP7.91□□□□□ -1.14
LINC01549-201ENST00000440664 RYDENQ9NUL5 291 aaKnown RBP7.91□□□□□ -1.14
LINC01549-201ENST00000440664 GSK3AP49840 483 aa7.9□□□□□ -1.14
LINC01549-201ENST00000440664 NBR1Q14596 966 aa7.9□□□□□ -1.14
LINC01549-201ENST00000440664 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.89□□□□□ -1.15
LINC01549-201ENST00000440664 VEGFBP49765 207 aa7.89□□□□□ -1.15
LINC01549-201ENST00000440664 GTPBP6O43824 516 aaPredicted RBP7.88□□□□□ -1.15
LINC01549-201ENST00000440664 ADH1BP00325 375 aa7.87□□□□□ -1.15
LINC01549-201ENST00000440664 SLC6A16Q9GZN6 736 aa7.87□□□□□ -1.15
LINC01549-201ENST00000440664 RTN4Q9NQC3 1192 aaKnown RBP7.87□□□□□ -1.15
LINC01549-201ENST00000440664 MFSD10Q14728 455 aa7.86□□□□□ -1.15
LINC01549-201ENST00000440664 NPAS3Q8IXF0 933 aa7.86□□□□□ -1.15
LINC01549-201ENST00000440664 CERKQ8TCT0 537 aa7.86□□□□□ -1.15
LINC01549-201ENST00000440664 KRTAP9-2Q9BYQ4 174 aa7.86□□□□□ -1.15
LINC01549-201ENST00000440664 ERBB4Q15303 1308 aa7.85□□□□□ -1.15
LINC01549-201ENST00000440664 DCAF8L2P0C7V8 631 aa7.85□□□□□ -1.15
LINC01549-201ENST00000440664 RASSF7Q02833 373 aa7.85□□□□□ -1.15
LINC01549-201ENST00000440664 PSMG3-AS1Q96PY0 264 aa7.85□□□□□ -1.15
LINC01549-201ENST00000440664 KRTAP9-6A0A140TA67 174 aa7.84□□□□□ -1.15
LINC01549-201ENST00000440664 CD2BP2O95400 341 aaKnown RBP7.84□□□□□ -1.15
LINC01549-201ENST00000440664 H3BM21 787 aa7.83□□□□□ -1.16
LINC01549-201ENST00000440664 DPYSL4O14531 572 aa7.83□□□□□ -1.16
LINC01549-201ENST00000440664 RPIAP49247 311 aa7.83□□□□□ -1.16
LINC01549-201ENST00000440664 GPAT2Q6NUI2 795 aa7.83□□□□□ -1.16
LINC01549-201ENST00000440664 KRTAP1-3Q8IUG1 177 aa7.82□□□□□ -1.16
LINC01549-201ENST00000440664 SMPD1P17405 629 aa7.81□□□□□ -1.16
LINC01549-201ENST00000440664 RNF225M0QZC1 329 aaPredicted RBP7.79□□□□□ -1.16
LINC01549-201ENST00000440664 BBXQ8WY36 941 aaPredicted RBP7.79□□□□□ -1.16
LINC01549-201ENST00000440664 SNIP1Q8TAD8 396 aaKnown RBP7.77□□□□□ -1.17
LINC01549-201ENST00000440664 NR1I2O75469 434 aa7.76□□□□□ -1.17
LINC01549-201ENST00000440664 IGHA1P01876 353 aa7.76□□□□□ -1.17
LINC01549-201ENST00000440664 KMT5BQ4FZB7 885 aa7.75□□□□□ -1.17
LINC01549-201ENST00000440664 ACTN4O43707 911 aaKnown RBP7.74□□□□□ -1.17
LINC01549-201ENST00000440664 J3QL48 77 aa7.73□□□□□ -1.17
LINC01549-201ENST00000440664 HPS1Q92902 700 aa7.73□□□□□ -1.17
LINC01549-201ENST00000440664 RBM27Q9P2N5 1060 aaKnown RBP7.73□□□□□ -1.17
LINC01549-201ENST00000440664 FCF1Q9Y324 198 aaKnown RBP7.73□□□□□ -1.17
LINC01549-201ENST00000440664 CADPS2Q86UW7 1296 aa7.71□□□□□ -1.18
LINC01549-201ENST00000440664 DNMT3AQ9Y6K1 912 aaPredicted RBP7.7□□□□□ -1.18
LINC01549-201ENST00000440664 WNT7AO00755 349 aa7.69□□□□□ -1.18
LINC01549-201ENST00000440664 CFHP08603 1231 aa7.69□□□□□ -1.18
LINC01549-201ENST00000440664 SPSB2Q99619 263 aa7.69□□□□□ -1.18
LINC01549-201ENST00000440664 ZBTB24O43167 697 aaPredicted RBP7.67□□□□□ -1.18
LINC01549-201ENST00000440664 BMP1P13497 986 aa7.67□□□□□ -1.18
LINC01549-201ENST00000440664 SPRYD3Q8NCJ5 442 aa7.67□□□□□ -1.18
LINC01549-201ENST00000440664 CDHR5Q9HBB8 845 aa7.67□□□□□ -1.18
LINC01549-201ENST00000440664 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.67□□□□□ -1.18
LINC01549-201ENST00000440664 CAMK2BQ13554 666 aa7.66□□□□□ -1.18
LINC01549-201ENST00000440664 PADI6Q6TGC4 694 aa7.66□□□□□ -1.18
LINC01549-201ENST00000440664 ADAM23O75077 832 aa7.65□□□□□ -1.18
LINC01549-201ENST00000440664 PRIM1P49642 420 aaKnown RBP7.65□□□□□ -1.18
LINC01549-201ENST00000440664 FOXK2Q01167 660 aa7.65□□□□□ -1.18
LINC01549-201ENST00000440664 SCUBE3Q8IX30 993 aa7.65□□□□□ -1.18
LINC01549-201ENST00000440664 MRGPRX2Q96LB1 330 aa7.65□□□□□ -1.18
LINC01549-201ENST00000440664 LCE3BQ5TA77 95 aa7.64□□□□□ -1.19
LINC01549-201ENST00000440664 ADAMTS8Q9UP79 889 aa7.64□□□□□ -1.19
LINC01549-201ENST00000440664 EYA1Q99502 592 aa7.63□□□□□ -1.19
LINC01549-201ENST00000440664 VSIG8P0DPA2 414 aa7.62□□□□□ -1.19
LINC01549-201ENST00000440664 IRS1P35568 1242 aa7.62□□□□□ -1.19
LINC01549-201ENST00000440664 TTC13Q8NBP0 860 aa7.62□□□□□ -1.19
LINC01549-201ENST00000440664 TRIM46Q7Z4K8 759 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms