RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 CASKIN1Q8WXD9 1431 aa14.3□□□□□ -0.12
CCBE1-202ENST00000439986 NFKBIBQ15653 356 aa14.3□□□□□ -0.12
CCBE1-202ENST00000439986 SMC4Q9NTJ3 1288 aa14.3□□□□□ -0.12
CCBE1-202ENST00000439986 CCDC144AA2RUR9 1427 aa14.3□□□□□ -0.12
CCBE1-202ENST00000439986 TICAM2Q86XR7 235 aa14.3□□□□□ -0.12
CCBE1-202ENST00000439986 RASSF8Q8NHQ8 419 aa14.3□□□□□ -0.12
CCBE1-202ENST00000439986 CUX1P39880 1505 aa14.29□□□□□ -0.12
CCBE1-202ENST00000439986 NCOA2Q15596 1464 aa14.29□□□□□ -0.12
CCBE1-202ENST00000439986 COG6Q9Y2V7 657 aa14.28□□□□□ -0.12
CCBE1-202ENST00000439986 ZNF644Q9H582 1327 aaPredicted RBP14.28□□□□□ -0.12
CCBE1-202ENST00000439986 EIF3AQ14152 1382 aaKnown RBP14.28□□□□□ -0.12
CCBE1-202ENST00000439986 TOMM22Q9NS69 142 aa14.28□□□□□ -0.12
CCBE1-202ENST00000439986 RBM10P98175 930 aaKnown RBP14.27□□□□□ -0.12
CCBE1-202ENST00000439986 RRP7AQ9Y3A4 280 aaKnown RBP14.27□□□□□ -0.12
CCBE1-202ENST00000439986 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
CCBE1-202ENST00000439986 CGNL1Q0VF96 1302 aa14.27□□□□□ -0.12
CCBE1-202ENST00000439986 BCL2L13Q9BXK5 485 aa14.27□□□□□ -0.13
CCBE1-202ENST00000439986 E9PSI1 815 aa14.27□□□□□ -0.13
CCBE1-202ENST00000439986 APAF1O14727 1248 aa14.27□□□□□ -0.13
CCBE1-202ENST00000439986 HDGFP51858 240 aaKnown RBP14.26□□□□□ -0.13
CCBE1-202ENST00000439986 TMCO4Q5TGY1 634 aa14.26□□□□□ -0.13
CCBE1-202ENST00000439986 CDCA7LQ96GN5 454 aa14.26□□□□□ -0.13
CCBE1-202ENST00000439986 BRD4O60885 1362 aaPredicted RBP14.25□□□□□ -0.13
CCBE1-202ENST00000439986 NBPF8Q3BBV2 869 aa14.25□□□□□ -0.13
CCBE1-202ENST00000439986 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
CCBE1-202ENST00000439986 HFM1A2PYH4 1435 aa14.24□□□□□ -0.13
CCBE1-202ENST00000439986 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
CCBE1-202ENST00000439986 TIAM1Q13009 1591 aa14.24□□□□□ -0.13
CCBE1-202ENST00000439986 FOXD4L6Q3SYB3 417 aaPredicted RBP14.24□□□□□ -0.13
CCBE1-202ENST00000439986 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
CCBE1-202ENST00000439986 FOXD4L3Q6VB84 417 aaPredicted RBP14.24□□□□□ -0.13
CCBE1-202ENST00000439986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCBE1-202ENST00000439986 FYCO1Q9BQS8 1478 aa14.24□□□□□ -0.13
CCBE1-202ENST00000439986 DDX11L8A8MPP1 907 aa14.22□□□□□ -0.13
CCBE1-202ENST00000439986 FRAT2O75474 233 aaPredicted RBP14.22□□□□□ -0.13
CCBE1-202ENST00000439986 SMG6Q86US8 1419 aaKnown RBP14.22□□□□□ -0.13
CCBE1-202ENST00000439986 PNISRQ8TF01 805 aaKnown RBP14.22□□□□□ -0.13
CCBE1-202ENST00000439986 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.22□□□□□ -0.13
CCBE1-202ENST00000439986 PES1O00541 588 aaKnown RBP14.22□□□□□ -0.13
CCBE1-202ENST00000439986 EFCAB2Q5VUJ9 269 aa14.22□□□□□ -0.13
CCBE1-202ENST00000439986 BRPF3Q9ULD4 1205 aa14.21□□□□□ -0.13
CCBE1-202ENST00000439986 BACH2Q9BYV9 841 aa14.21□□□□□ -0.13
CCBE1-202ENST00000439986 PRDM10Q9NQV6 1147 aa14.21□□□□□ -0.13
CCBE1-202ENST00000439986 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
CCBE1-202ENST00000439986 TPM4P67936 248 aa14.21□□□□□ -0.13
CCBE1-202ENST00000439986 CFTRP13569 1480 aa14.2□□□□□ -0.14
CCBE1-202ENST00000439986 STK31Q9BXU1 1019 aa14.2□□□□□ -0.14
CCBE1-202ENST00000439986 GPATCH3Q96I76 525 aa14.2□□□□□ -0.14
CCBE1-202ENST00000439986 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
CCBE1-202ENST00000439986 CALD1Q05682 793 aaKnown RBP14.2□□□□□ -0.14
CCBE1-202ENST00000439986 MARCH6O60337 910 aa14.19□□□□□ -0.14
CCBE1-202ENST00000439986 SPAG9O60271 1321 aaKnown RBP14.19□□□□□ -0.14
CCBE1-202ENST00000439986 CNPY4Q8N129 248 aa14.19□□□□□ -0.14
CCBE1-202ENST00000439986 NGEFQ8N5V2 710 aa14.18□□□□□ -0.14
CCBE1-202ENST00000439986 ADAMTS8Q9UP79 889 aa14.18□□□□□ -0.14
CCBE1-202ENST00000439986 KIF3BO15066 747 aa14.18□□□□□ -0.14
CCBE1-202ENST00000439986 ZKSCAN2Q63HK3 967 aa14.18□□□□□ -0.14
CCBE1-202ENST00000439986 MIA2Q96PC5 1412 aa14.18□□□□□ -0.14
CCBE1-202ENST00000439986 JPH4Q96JJ6 628 aa14.17□□□□□ -0.14
CCBE1-202ENST00000439986 MPHOSPH10O00566 681 aaKnown RBP14.17□□□□□ -0.14
CCBE1-202ENST00000439986 ANAPC15P60006 121 aa14.17□□□□□ -0.14
CCBE1-202ENST00000439986 GTF2E1P29083 439 aaPredicted RBP14.16□□□□□ -0.14
CCBE1-202ENST00000439986 ARID4AP29374 1257 aaPredicted RBP14.16□□□□□ -0.14
CCBE1-202ENST00000439986 HTATSF1O43719 755 aaKnown RBP14.16□□□□□ -0.14
CCBE1-202ENST00000439986 GAPVD1Q14C86 1478 aa14.16□□□□□ -0.14
CCBE1-202ENST00000439986 NGDNQ8NEJ9 315 aaKnown RBP14.16□□□□□ -0.14
CCBE1-202ENST00000439986 TRAK1Q9UPV9 953 aa14.15□□□□□ -0.14
CCBE1-202ENST00000439986 NCAPD3P42695 1498 aa14.15□□□□□ -0.14
CCBE1-202ENST00000439986 AMPHP49418 695 aa14.15□□□□□ -0.14
CCBE1-202ENST00000439986 RILPL2Q969X0 211 aa14.15□□□□□ -0.14
CCBE1-202ENST00000439986 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
CCBE1-202ENST00000439986 RRP9O43818 475 aaKnown RBP14.14□□□□□ -0.15
CCBE1-202ENST00000439986 SYAP1Q96A49 352 aaPredicted RBP14.14□□□□□ -0.15
CCBE1-202ENST00000439986 CHMP5Q9NZZ3 219 aa14.14□□□□□ -0.15
CCBE1-202ENST00000439986 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCBE1-202ENST00000439986 C11orf95C9JLR9 678 aaPredicted RBP14.14□□□□□ -0.15
CCBE1-202ENST00000439986 DDX49Q9Y6V7 483 aaKnown RBP14.14□□□□□ -0.15
CCBE1-202ENST00000439986 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
CCBE1-202ENST00000439986 ELL2O00472 640 aaPredicted RBP14.14□□□□□ -0.15
CCBE1-202ENST00000439986 RBM28Q9NW13 759 aaKnown RBP14.14□□□□□ -0.15
CCBE1-202ENST00000439986 NAIPQ13075 1403 aa14.13□□□□□ -0.15
CCBE1-202ENST00000439986 AEBP2Q6ZN18 517 aaPredicted RBP14.13□□□□□ -0.15
CCBE1-202ENST00000439986 PANK1Q8TE04 598 aa14.13□□□□□ -0.15
CCBE1-202ENST00000439986 MRVI1Q9Y6F6 885 aa14.12□□□□□ -0.15
CCBE1-202ENST00000439986 SKOR2Q2VWA4 1001 aaPredicted RBP14.12□□□□□ -0.15
CCBE1-202ENST00000439986 CCAR2Q8N163 923 aaKnown RBP14.12□□□□□ -0.15
CCBE1-202ENST00000439986 NECTIN2Q92692 538 aa14.12□□□□□ -0.15
CCBE1-202ENST00000439986 TPD52L1Q16890 204 aaPredicted RBP14.11□□□□□ -0.15
CCBE1-202ENST00000439986 ANKRD45Q5TZF3 282 aa14.11□□□□□ -0.15
CCBE1-202ENST00000439986 ZNF771Q7L3S4 317 aaPredicted RBP14.11□□□□□ -0.15
CCBE1-202ENST00000439986 ZMYND15Q9H091 742 aa14.11□□□□□ -0.15
CCBE1-202ENST00000439986 SF3A1Q15459 793 aaKnown RBP14.11□□□□□ -0.15
CCBE1-202ENST00000439986 CEP89Q96ST8 783 aa14.11□□□□□ -0.15
CCBE1-202ENST00000439986 TMCO5BA8MYB1 307 aa14.1□□□□□ -0.15
CCBE1-202ENST00000439986 NAP1L1P55209 391 aaKnown RBP14.1□□□□□ -0.15
CCBE1-202ENST00000439986 TERF2IPQ9NYB0 399 aa14.1□□□□□ -0.15
CCBE1-202ENST00000439986 DZIP1LQ8IYY4 767 aaKnown RBP14.1□□□□□ -0.15
CCBE1-202ENST00000439986 EFCAB5A4FU69 1503 aa14.1□□□□□ -0.15
CCBE1-202ENST00000439986 H3BQV1 296 aa14.1□□□□□ -0.15
CCBE1-202ENST00000439986 NOM1Q5C9Z4 860 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms