RNA–Protein interactions for RNA: ENST00000439790.5

LINC00460-202, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best)

Gene LINC00460, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-202ENST00000439790 IPO9Q96P70 1041 aaKnown RBP9.51□□□□□ -0.89
LINC00460-202ENST00000439790 MLH3Q9UHC1 1453 aa9.51□□□□□ -0.89
LINC00460-202ENST00000439790 CDK13Q14004 1512 aaKnown RBP9.51□□□□□ -0.89
LINC00460-202ENST00000439790 STRCP1A6NGW2 1772 aa9.5□□□□□ -0.89
LINC00460-202ENST00000439790 DNMT1P26358 1616 aaKnown RBP9.5□□□□□ -0.89
LINC00460-202ENST00000439790 TONSLQ96HA7 1378 aa9.5□□□□□ -0.89
LINC00460-202ENST00000439790 RNF17Q9BXT8 1623 aaKnown RBP9.49□□□□□ -0.89
LINC00460-202ENST00000439790 MROH2AA6NES4 1674 aa9.49□□□□□ -0.89
LINC00460-202ENST00000439790 A2ML1A8K2U0 1454 aa9.49□□□□□ -0.89
LINC00460-202ENST00000439790 CCDC18Q5T9S5 1454 aa9.49□□□□□ -0.89
LINC00460-202ENST00000439790 GLIPR1L2Q4G1C9 344 aa9.49□□□□□ -0.89
LINC00460-202ENST00000439790 ZBTB47Q9UFB7 747 aaPredicted RBP9.49□□□□□ -0.89
LINC00460-202ENST00000439790 ZBED9Q6R2W3 1325 aa9.49□□□□□ -0.89
LINC00460-202ENST00000439790 FYCO1Q9BQS8 1478 aa9.47□□□□□ -0.89
LINC00460-202ENST00000439790 WASHC2AQ641Q2 1341 aa9.47□□□□□ -0.89
LINC00460-202ENST00000439790 SETBP1Q9Y6X0 1596 aa9.46□□□□□ -0.89
LINC00460-202ENST00000439790 SUPT6HQ7KZ85 1726 aaKnown RBP9.46□□□□□ -0.89
LINC00460-202ENST00000439790 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
LINC00460-202ENST00000439790 NPHP4O75161 1426 aaPredicted RBP9.46□□□□□ -0.9
LINC00460-202ENST00000439790 CLTCQ00610 1675 aaKnown RBP9.45□□□□□ -0.9
LINC00460-202ENST00000439790 WASHC2CQ9Y4E1 1318 aa9.45□□□□□ -0.9
LINC00460-202ENST00000439790 KIF14Q15058 1648 aa9.45□□□□□ -0.9
LINC00460-202ENST00000439790 GALR2O43603 387 aaPredicted RBP9.44□□□□□ -0.9
LINC00460-202ENST00000439790 RANGAP1P46060 587 aaPredicted RBP9.44□□□□□ -0.9
LINC00460-202ENST00000439790 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00460-202ENST00000439790 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
LINC00460-202ENST00000439790 OTUD5Q96G74 571 aa9.44□□□□□ -0.9
LINC00460-202ENST00000439790 HFM1A2PYH4 1435 aa9.44□□□□□ -0.9
LINC00460-202ENST00000439790 FAM135BQ49AJ0 1406 aa9.44□□□□□ -0.9
LINC00460-202ENST00000439790 SMG6Q86US8 1419 aaKnown RBP9.44□□□□□ -0.9
LINC00460-202ENST00000439790 ARHGAP5Q13017 1502 aa9.44□□□□□ -0.9
LINC00460-202ENST00000439790 LRP6O75581 1613 aa9.44□□□□□ -0.9
LINC00460-202ENST00000439790 KIDINS220Q9ULH0 1771 aa9.44□□□□□ -0.9
LINC00460-202ENST00000439790 MED14O60244 1454 aa9.43□□□□□ -0.9
LINC00460-202ENST00000439790 FBXO31Q5XUX0 539 aaPredicted RBP9.43□□□□□ -0.9
LINC00460-202ENST00000439790 ABCC1P33527 1531 aa9.42□□□□□ -0.9
LINC00460-202ENST00000439790 PAK3O75914 559 aaPredicted RBP9.42□□□□□ -0.9
LINC00460-202ENST00000439790 ITGAEP38570 1179 aa9.42□□□□□ -0.9
LINC00460-202ENST00000439790 CCDC136Q96JN2 1154 aa9.42□□□□□ -0.9
LINC00460-202ENST00000439790 PTPN23Q9H3S7 1636 aa9.42□□□□□ -0.9
LINC00460-202ENST00000439790 SYNMO15061 1565 aa9.41□□□□□ -0.9
LINC00460-202ENST00000439790 MS4A1P11836 297 aa9.41□□□□□ -0.9
LINC00460-202ENST00000439790 ANKLE2Q86XL3 938 aa9.41□□□□□ -0.9
LINC00460-202ENST00000439790 ANO8Q9HCE9 1232 aaPredicted RBP9.41□□□□□ -0.9
LINC00460-202ENST00000439790 MYO5CQ9NQX4 1742 aa9.41□□□□□ -0.9
LINC00460-202ENST00000439790 GCC2Q8IWJ2 1684 aa9.41□□□□□ -0.9
LINC00460-202ENST00000439790 DDRGK1Q96HY6 314 aa9.4□□□□□ -0.9
LINC00460-202ENST00000439790 TNRQ92752 1358 aa9.39□□□□□ -0.91
LINC00460-202ENST00000439790 RNF123Q5XPI4 1314 aa9.39□□□□□ -0.91
LINC00460-202ENST00000439790 TCERG1O14776 1098 aaKnown RBP9.39□□□□□ -0.91
LINC00460-202ENST00000439790 GGT6Q6P531 493 aa9.39□□□□□ -0.91
LINC00460-202ENST00000439790 FMN1Q68DA7 1419 aa9.39□□□□□ -0.91
LINC00460-202ENST00000439790 CASKIN1Q8WXD9 1431 aa9.39□□□□□ -0.91
LINC00460-202ENST00000439790 PLXNC1O60486 1568 aa9.38□□□□□ -0.91
LINC00460-202ENST00000439790 IQGAP1P46940 1657 aa9.37□□□□□ -0.91
LINC00460-202ENST00000439790 ITSN2Q9NZM3 1697 aa9.37□□□□□ -0.91
LINC00460-202ENST00000439790 ROBO1Q9Y6N7 1651 aa9.37□□□□□ -0.91
LINC00460-202ENST00000439790 POTEB2H3BUK9 544 aa9.37□□□□□ -0.91
LINC00460-202ENST00000439790 RGS12O14924 1447 aa9.37□□□□□ -0.91
LINC00460-202ENST00000439790 SAMD9LQ8IVG5 1584 aa9.37□□□□□ -0.91
LINC00460-202ENST00000439790 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
LINC00460-202ENST00000439790 XIRP1Q702N8 1843 aaKnown RBP9.36□□□□□ -0.91
LINC00460-202ENST00000439790 DEPDC5O75140 1603 aa9.36□□□□□ -0.91
LINC00460-202ENST00000439790 RXRBP28702 533 aa9.36□□□□□ -0.91
LINC00460-202ENST00000439790 RBM33Q96EV2 1170 aaKnown RBP9.36□□□□□ -0.91
LINC00460-202ENST00000439790 FGD6Q6ZV73 1430 aa9.36□□□□□ -0.91
LINC00460-202ENST00000439790 JCADQ9P266 1359 aa9.36□□□□□ -0.91
LINC00460-202ENST00000439790 ZNF772Q68DY9 489 aaPredicted RBP9.35□□□□□ -0.91
LINC00460-202ENST00000439790 EP400Q96L91 3159 aa9.34□□□□□ -0.91
LINC00460-202ENST00000439790 CDK12Q9NYV4 1490 aaPredicted RBP9.34□□□□□ -0.91
LINC00460-202ENST00000439790 POTEMA6NI47 508 aa9.34□□□□□ -0.91
LINC00460-202ENST00000439790 EIF4G2P78344 907 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC00460-202ENST00000439790 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
LINC00460-202ENST00000439790 EHBP1L1Q8N3D4 1523 aa9.34□□□□□ -0.91
LINC00460-202ENST00000439790 A2MP01023 1474 aa9.34□□□□□ -0.91
LINC00460-202ENST00000439790 CDC42BPBQ9Y5S2 1711 aa9.34□□□□□ -0.92
LINC00460-202ENST00000439790 ZC3H13Q5T200 1668 aaKnown RBP9.33□□□□□ -0.92
LINC00460-202ENST00000439790 TROQ12816 1431 aaPredicted RBP9.33□□□□□ -0.92
LINC00460-202ENST00000439790 MIA2Q96PC5 1412 aa9.33□□□□□ -0.92
LINC00460-202ENST00000439790 FAM43AQ8N2R8 423 aa9.33□□□□□ -0.92
LINC00460-202ENST00000439790 TMEM94Q12767 1356 aa9.33□□□□□ -0.92
LINC00460-202ENST00000439790 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
LINC00460-202ENST00000439790 THEMISQ8N1K5 641 aaPredicted RBP9.32□□□□□ -0.92
LINC00460-202ENST00000439790 PHF12Q96QT6 1004 aa9.32□□□□□ -0.92
LINC00460-202ENST00000439790 NUDCQ9Y266 331 aa9.32□□□□□ -0.92
LINC00460-202ENST00000439790 SALL2Q9Y467 1007 aaPredicted RBP9.32□□□□□ -0.92
LINC00460-202ENST00000439790 ROCK2O75116 1388 aaKnown RBP9.32□□□□□ -0.92
LINC00460-202ENST00000439790 INSRP06213 1382 aa9.32□□□□□ -0.92
LINC00460-202ENST00000439790 SPAG9O60271 1321 aaKnown RBP9.31□□□□□ -0.92
LINC00460-202ENST00000439790 FAM135AQ9P2D6 1515 aa9.31□□□□□ -0.92
LINC00460-202ENST00000439790 GSE1Q14687 1217 aa9.31□□□□□ -0.92
LINC00460-202ENST00000439790 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
LINC00460-202ENST00000439790 MEX3CQ5U5Q3 659 aaKnown RBP9.31□□□□□ -0.92
LINC00460-202ENST00000439790 PZPP20742 1482 aa9.31□□□□□ -0.92
LINC00460-202ENST00000439790 CCDC7Q96M83 1385 aa9.3□□□□□ -0.92
LINC00460-202ENST00000439790 NBR1Q14596 966 aa9.3□□□□□ -0.92
LINC00460-202ENST00000439790 POTEGQ6S5H5 508 aa9.3□□□□□ -0.92
LINC00460-202ENST00000439790 SIN3AQ96ST3 1273 aa9.3□□□□□ -0.92
LINC00460-202ENST00000439790 PRKRIP1Q9H875 184 aaPredicted RBP9.3□□□□□ -0.92
LINC00460-202ENST00000439790 COL16A1Q07092 1604 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms