RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 CALD1Q05682 793 aaKnown RBP7.73□□□□□ -1.17
BDNF-210ENST00000438929 CUL7Q14999 1698 aa7.73□□□□□ -1.17
BDNF-210ENST00000438929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.73□□□□□ -1.17
BDNF-210ENST00000438929 DCAF8L1A6NGE4 600 aa7.73□□□□□ -1.17
BDNF-210ENST00000438929 PLEKHD1A6NEE1 506 aa7.72□□□□□ -1.17
BDNF-210ENST00000438929 E9PSI1 815 aa7.72□□□□□ -1.17
BDNF-210ENST00000438929 CLCN1P35523 988 aa7.72□□□□□ -1.17
BDNF-210ENST00000438929 AAMPQ13685 434 aa7.72□□□□□ -1.17
BDNF-210ENST00000438929 NASPP49321 788 aaPredicted RBP7.72□□□□□ -1.17
BDNF-210ENST00000438929 TPM2P07951 284 aa7.71□□□□□ -1.17
BDNF-210ENST00000438929 TBC1D2Q9BYX2 928 aa7.71□□□□□ -1.17
BDNF-210ENST00000438929 FOXD4L5Q5VV16 416 aaPredicted RBP7.71□□□□□ -1.18
BDNF-210ENST00000438929 FOXD4L4Q8WXT5 416 aaPredicted RBP7.71□□□□□ -1.18
BDNF-210ENST00000438929 FYCO1Q9BQS8 1478 aa7.71□□□□□ -1.18
BDNF-210ENST00000438929 U2SURPO15042 1029 aaKnown RBP7.71□□□□□ -1.18
BDNF-210ENST00000438929 CDK11BP21127 795 aaKnown RBP7.71□□□□□ -1.18
BDNF-210ENST00000438929 CFAP53Q96M91 514 aa7.71□□□□□ -1.18
BDNF-210ENST00000438929 NBPF1Q3BBV0 1214 aa7.7□□□□□ -1.18
BDNF-210ENST00000438929 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.7□□□□□ -1.18
BDNF-210ENST00000438929 PDZRN3Q9UPQ7 1066 aa7.7□□□□□ -1.18
BDNF-210ENST00000438929 SMC4Q9NTJ3 1288 aa7.7□□□□□ -1.18
BDNF-210ENST00000438929 PCF11O94913 1555 aaKnown RBP7.7□□□□□ -1.18
BDNF-210ENST00000438929 ANKRD30BQ9BXX2 1392 aa7.7□□□□□ -1.18
BDNF-210ENST00000438929 SEC24BO95487 1268 aa7.7□□□□□ -1.18
BDNF-210ENST00000438929 SKOR2Q2VWA4 1001 aaPredicted RBP7.7□□□□□ -1.18
BDNF-210ENST00000438929 ANKRD30AQ9BXX3 1397 aa7.69□□□□□ -1.18
BDNF-210ENST00000438929 MORC1Q86VD1 984 aa7.69□□□□□ -1.18
BDNF-210ENST00000438929 APBB1O00213 710 aa7.69□□□□□ -1.18
BDNF-210ENST00000438929 IGHDP01880 384 aa7.69□□□□□ -1.18
BDNF-210ENST00000438929 PTMSP20962 102 aa7.69□□□□□ -1.18
BDNF-210ENST00000438929 BRD2P25440 801 aaKnown RBP7.69□□□□□ -1.18
BDNF-210ENST00000438929 NUP160Q12769 1436 aa7.68□□□□□ -1.18
BDNF-210ENST00000438929 PTPN23Q9H3S7 1636 aa7.68□□□□□ -1.18
BDNF-210ENST00000438929 MIA2Q96PC5 1412 aa7.68□□□□□ -1.18
BDNF-210ENST00000438929 U2AF1L5P0DN76 240 aaPredicted RBP7.68□□□□□ -1.18
BDNF-210ENST00000438929 U2AF1Q01081 240 aaKnown RBP eCLIP7.68□□□□□ -1.18
BDNF-210ENST00000438929 GRIN2AQ12879 1464 aa7.68□□□□□ -1.18
BDNF-210ENST00000438929 KIAA2012Q0VF49 1180 aa7.68□□□□□ -1.18
BDNF-210ENST00000438929 FOXD4L6Q3SYB3 417 aaPredicted RBP7.68□□□□□ -1.18
BDNF-210ENST00000438929 FOXD4L3Q6VB84 417 aaPredicted RBP7.68□□□□□ -1.18
BDNF-210ENST00000438929 PDCL3Q9H2J4 239 aa7.68□□□□□ -1.18
BDNF-210ENST00000438929 DHX29Q7Z478 1369 aaKnown RBP7.68□□□□□ -1.18
BDNF-210ENST00000438929 DUSP27Q5VZP5 1158 aa7.68□□□□□ -1.18
BDNF-210ENST00000438929 PRDM10Q9NQV6 1147 aa7.68□□□□□ -1.18
BDNF-210ENST00000438929 PPP2R1AP30153 589 aa7.67□□□□□ -1.18
BDNF-210ENST00000438929 LNPKQ9C0E8 428 aa7.67□□□□□ -1.18
BDNF-210ENST00000438929 ARHGEF11O15085 1522 aa7.67□□□□□ -1.18
BDNF-210ENST00000438929 RNF214Q8ND24 703 aa7.67□□□□□ -1.18
BDNF-210ENST00000438929 HNRNPMP52272 730 aaKnown RBP eCLIP7.66□□□□□ -1.18
BDNF-210ENST00000438929 MCTP1Q6DN14 999 aa7.66□□□□□ -1.18
BDNF-210ENST00000438929 CAVIN1Q6NZI2 390 aaKnown RBP7.66□□□□□ -1.18
BDNF-210ENST00000438929 MPNDQ8N594 471 aa7.66□□□□□ -1.18
BDNF-210ENST00000438929 CHAF1AQ13111 956 aaPredicted RBP7.66□□□□□ -1.18
BDNF-210ENST00000438929 PDE3AQ14432 1141 aa7.66□□□□□ -1.18
BDNF-210ENST00000438929 CCDC173Q0VFZ6 552 aa7.65□□□□□ -1.18
BDNF-210ENST00000438929 ANKRD45Q5TZF3 282 aa7.65□□□□□ -1.18
BDNF-210ENST00000438929 ZKSCAN2Q63HK3 967 aa7.65□□□□□ -1.18
BDNF-210ENST00000438929 NOL8Q76FK4 1167 aaKnown RBP7.65□□□□□ -1.18
BDNF-210ENST00000438929 RPRD2Q5VT52 1461 aaKnown RBP7.65□□□□□ -1.18
BDNF-210ENST00000438929 UQCRHLA0A096LP55 91 aa7.65□□□□□ -1.18
BDNF-210ENST00000438929 UQCRHP07919 91 aa7.65□□□□□ -1.18
BDNF-210ENST00000438929 SLFN5Q08AF3 891 aa7.65□□□□□ -1.18
BDNF-210ENST00000438929 CASC1Q6TDU7 716 aa7.65□□□□□ -1.18
BDNF-210ENST00000438929 ZSCAN30Q86W11 494 aa7.65□□□□□ -1.18
BDNF-210ENST00000438929 MAP7D2Q96T17 732 aa7.65□□□□□ -1.19
BDNF-210ENST00000438929 ZHX1Q9UKY1 873 aaPredicted RBP7.65□□□□□ -1.19
BDNF-210ENST00000438929 EIF3AQ14152 1382 aaKnown RBP7.64□□□□□ -1.19
BDNF-210ENST00000438929 DZIP1LQ8IYY4 767 aaKnown RBP7.64□□□□□ -1.19
BDNF-210ENST00000438929 CCDC144AA2RUR9 1427 aa7.64□□□□□ -1.19
BDNF-210ENST00000438929 XPCQ01831 940 aaPredicted RBP7.64□□□□□ -1.19
BDNF-210ENST00000438929 TBC1D32Q96NH3 1257 aa7.64□□□□□ -1.19
BDNF-210ENST00000438929 LMOD2Q6P5Q4 547 aa7.63□□□□□ -1.19
BDNF-210ENST00000438929 ISY1Q9ULR0 285 aaKnown RBP7.63□□□□□ -1.19
BDNF-210ENST00000438929 KDM2BQ8NHM5 1336 aa7.63□□□□□ -1.19
BDNF-210ENST00000438929 KIAA0586Q9BVV6 1533 aa7.63□□□□□ -1.19
BDNF-210ENST00000438929 IPO8O15397 1037 aaKnown RBP7.62□□□□□ -1.19
BDNF-210ENST00000438929 TNPO1Q92973 898 aaKnown RBP7.62□□□□□ -1.19
BDNF-210ENST00000438929 KIAA1107Q9UPP5 1409 aa7.62□□□□□ -1.19
BDNF-210ENST00000438929 LRPPRCP42704 1394 aaKnown RBP7.62□□□□□ -1.19
BDNF-210ENST00000438929 CSPP1Q1MSJ5 1256 aa7.62□□□□□ -1.19
BDNF-210ENST00000438929 CTTNBP2Q8WZ74 1663 aa7.62□□□□□ -1.19
BDNF-210ENST00000438929 ELL2O00472 640 aaPredicted RBP7.61□□□□□ -1.19
BDNF-210ENST00000438929 ANKRD50Q9ULJ7 1429 aa7.61□□□□□ -1.19
BDNF-210ENST00000438929 PRPF40AO75400 957 aaKnown RBP7.61□□□□□ -1.19
BDNF-210ENST00000438929 SAFB2Q14151 953 aaKnown RBP eCLIP7.61□□□□□ -1.19
BDNF-210ENST00000438929 MLECQ14165 292 aa7.61□□□□□ -1.19
BDNF-210ENST00000438929 TCP11L2Q8N4U5 519 aa7.61□□□□□ -1.19
BDNF-210ENST00000438929 DDX19BQ9UMR2 479 aa7.6□□□□□ -1.19
BDNF-210ENST00000438929 ZNF771Q7L3S4 317 aaPredicted RBP7.6□□□□□ -1.19
BDNF-210ENST00000438929 MTERF4Q7Z6M4 381 aaKnown RBP7.6□□□□□ -1.19
BDNF-210ENST00000438929 DRC7Q8IY82 874 aa7.6□□□□□ -1.19
BDNF-210ENST00000438929 JPH4Q96JJ6 628 aa7.6□□□□□ -1.19
BDNF-210ENST00000438929 NAP1L2Q9ULW6 460 aaPredicted RBP7.6□□□□□ -1.19
BDNF-210ENST00000438929 PCDHB15Q9Y5E8 787 aa7.6□□□□□ -1.19
BDNF-210ENST00000438929 ST18O60284 1047 aa7.59□□□□□ -1.19
BDNF-210ENST00000438929 SYAP1Q96A49 352 aaPredicted RBP7.59□□□□□ -1.19
BDNF-210ENST00000438929 SSFA2P28290 1259 aa7.59□□□□□ -1.19
BDNF-210ENST00000438929 BBXQ8WY36 941 aaPredicted RBP7.59□□□□□ -1.19
BDNF-210ENST00000438929 CHMP4BQ9H444 224 aaKnown RBP7.59□□□□□ -1.19
BDNF-210ENST00000438929 SPINK5Q9NQ38 1064 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms