RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 MIA2Q96PC5 1412 aa11.53□□□□□ -0.56
HMGB2-202ENST00000438704 ATP10BO94823 1461 aa11.52□□□□□ -0.56
HMGB2-202ENST00000438704 ARHGAP33O14559 1287 aa11.52□□□□□ -0.57
HMGB2-202ENST00000438704 ADCY10Q96PN6 1610 aa11.52□□□□□ -0.57
HMGB2-202ENST00000438704 TCOF1Q13428 1488 aaKnown RBP11.51□□□□□ -0.57
HMGB2-202ENST00000438704 ABCC2Q92887 1545 aa11.51□□□□□ -0.57
HMGB2-202ENST00000438704 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
HMGB2-202ENST00000438704 AXIN2Q9Y2T1 843 aa11.51□□□□□ -0.57
HMGB2-202ENST00000438704 ERCC6L2Q5T890 1561 aa11.5□□□□□ -0.57
HMGB2-202ENST00000438704 ZEB1P37275 1124 aaPredicted RBP11.5□□□□□ -0.57
HMGB2-202ENST00000438704 PPP4R3BQ5MIZ7 849 aa11.48□□□□□ -0.57
HMGB2-202ENST00000438704 KDM5BQ9UGL1 1544 aa11.47□□□□□ -0.57
HMGB2-202ENST00000438704 TK2O00142 265 aa11.47□□□□□ -0.57
HMGB2-202ENST00000438704 ADGRD1Q6QNK2 874 aa11.47□□□□□ -0.57
HMGB2-202ENST00000438704 OXER1Q8TDS5 423 aa11.46□□□□□ -0.57
HMGB2-202ENST00000438704 ABCC10Q5T3U5 1492 aa11.45□□□□□ -0.58
HMGB2-202ENST00000438704 PTPN23Q9H3S7 1636 aa11.45□□□□□ -0.58
HMGB2-202ENST00000438704 PLEKHD1A6NEE1 506 aa11.44□□□□□ -0.58
HMGB2-202ENST00000438704 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
HMGB2-202ENST00000438704 AKNAQ7Z591 1439 aa11.43□□□□□ -0.58
HMGB2-202ENST00000438704 KIF14Q15058 1648 aa11.42□□□□□ -0.58
HMGB2-202ENST00000438704 CLSPNQ9HAW4 1339 aa11.42□□□□□ -0.58
HMGB2-202ENST00000438704 GPATCH8Q9UKJ3 1502 aaKnown RBP11.42□□□□□ -0.58
HMGB2-202ENST00000438704 PDE4AP27815 886 aa11.42□□□□□ -0.58
HMGB2-202ENST00000438704 ITSN2Q9NZM3 1697 aa11.42□□□□□ -0.58
HMGB2-202ENST00000438704 KCNH8Q96L42 1107 aa11.41□□□□□ -0.58
HMGB2-202ENST00000438704 NCKAP5LQ9HCH0 1330 aa11.4□□□□□ -0.58
HMGB2-202ENST00000438704 GTPBP6O43824 516 aaPredicted RBP11.4□□□□□ -0.58
HMGB2-202ENST00000438704 HFM1A2PYH4 1435 aa11.39□□□□□ -0.59
HMGB2-202ENST00000438704 HRO43593 1189 aa11.39□□□□□ -0.59
HMGB2-202ENST00000438704 PSEN2P49810 448 aa11.39□□□□□ -0.59
HMGB2-202ENST00000438704 FAM50AQ14320 339 aaKnown RBP11.39□□□□□ -0.59
HMGB2-202ENST00000438704 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
HMGB2-202ENST00000438704 SETD5Q9C0A6 1442 aa11.39□□□□□ -0.59
HMGB2-202ENST00000438704 PTPRKQ15262 1439 aa11.38□□□□□ -0.59
HMGB2-202ENST00000438704 DMRTA1Q5VZB9 504 aa11.38□□□□□ -0.59
HMGB2-202ENST00000438704 ROCK1Q13464 1354 aa11.38□□□□□ -0.59
HMGB2-202ENST00000438704 ZCCHC11Q5TAX3 1644 aaKnown RBP11.38□□□□□ -0.59
HMGB2-202ENST00000438704 ARID3CA6NKF2 412 aa11.37□□□□□ -0.59
HMGB2-202ENST00000438704 HCSTQ9UBK5 93 aa11.37□□□□□ -0.59
HMGB2-202ENST00000438704 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
HMGB2-202ENST00000438704 DNMT1P26358 1616 aaKnown RBP11.36□□□□□ -0.59
HMGB2-202ENST00000438704 CCER1Q8TC90 406 aaPredicted RBP11.36□□□□□ -0.59
HMGB2-202ENST00000438704 ARAP3Q8WWN8 1544 aa11.35□□□□□ -0.59
HMGB2-202ENST00000438704 CDC42BPAQ5VT25 1732 aa11.35□□□□□ -0.59
HMGB2-202ENST00000438704 DHX57Q6P158 1386 aaKnown RBP11.35□□□□□ -0.59
HMGB2-202ENST00000438704 RAB3GAP2Q9H2M9 1393 aa11.35□□□□□ -0.59
HMGB2-202ENST00000438704 CAMSAP2Q08AD1 1489 aa11.34□□□□□ -0.59
HMGB2-202ENST00000438704 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
HMGB2-202ENST00000438704 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
HMGB2-202ENST00000438704 CFDP1Q9UEE9 299 aaPredicted RBP11.34□□□□□ -0.59
HMGB2-202ENST00000438704 PREX2Q70Z35 1606 aa11.34□□□□□ -0.59
HMGB2-202ENST00000438704 ABCC5O15440 1437 aa11.34□□□□□ -0.59
HMGB2-202ENST00000438704 DAPK1P53355 1430 aa11.34□□□□□ -0.59
HMGB2-202ENST00000438704 NAIPQ13075 1403 aa11.34□□□□□ -0.59
HMGB2-202ENST00000438704 SHANK2Q9UPX8 1470 aa11.33□□□□□ -0.6
HMGB2-202ENST00000438704 MFSD10Q14728 455 aa11.33□□□□□ -0.6
HMGB2-202ENST00000438704 ZNF454Q8N9F8 522 aa11.33□□□□□ -0.6
HMGB2-202ENST00000438704 KCNK17Q96T54 332 aa11.33□□□□□ -0.6
HMGB2-202ENST00000438704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.33□□□□□ -0.64e-39■□□□□ 9.9
HMGB2-202ENST00000438704 ADGRL2O95490 1459 aa11.32□□□□□ -0.6
HMGB2-202ENST00000438704 WDR7Q9Y4E6 1490 aa11.32□□□□□ -0.6
HMGB2-202ENST00000438704 FOSBP53539 338 aa11.32□□□□□ -0.6
HMGB2-202ENST00000438704 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
HMGB2-202ENST00000438704 ARHGEF5Q12774 1597 aa11.32□□□□□ -0.6
HMGB2-202ENST00000438704 GCC2Q8IWJ2 1684 aa11.31□□□□□ -0.6
HMGB2-202ENST00000438704 RSPH4AQ5TD94 716 aa11.31□□□□□ -0.6
HMGB2-202ENST00000438704 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
HMGB2-202ENST00000438704 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
HMGB2-202ENST00000438704 KIAA1107Q9UPP5 1409 aa11.31□□□□□ -0.6
HMGB2-202ENST00000438704 PLEKHH2Q8IVE3 1493 aa11.31□□□□□ -0.6
HMGB2-202ENST00000438704 TTC37Q6PGP7 1564 aa11.3□□□□□ -0.6
HMGB2-202ENST00000438704 PLCH2O75038 1416 aa11.3□□□□□ -0.6
HMGB2-202ENST00000438704 MBD5Q9P267 1494 aa11.3□□□□□ -0.6
HMGB2-202ENST00000438704 ITGAEP38570 1179 aa11.29□□□□□ -0.6
HMGB2-202ENST00000438704 CDC42BPBQ9Y5S2 1711 aa11.29□□□□□ -0.6
HMGB2-202ENST00000438704 CROCC2H7BZ55 1655 aa11.28□□□□□ -0.6
HMGB2-202ENST00000438704 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
HMGB2-202ENST00000438704 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
HMGB2-202ENST00000438704 ZNF644Q9H582 1327 aaPredicted RBP11.28□□□□□ -0.6
HMGB2-202ENST00000438704 ABCA9Q8IUA7 1624 aa11.27□□□□□ -0.6
HMGB2-202ENST00000438704 MYO5CQ9NQX4 1742 aa11.27□□□□□ -0.61
HMGB2-202ENST00000438704 EVI5O60447 810 aa11.27□□□□□ -0.61
HMGB2-202ENST00000438704 PTPREP23469 700 aa11.27□□□□□ -0.61
HMGB2-202ENST00000438704 NCOA1Q15788 1441 aa11.26□□□□□ -0.61
HMGB2-202ENST00000438704 ASXL2Q76L83 1435 aa11.26□□□□□ -0.61
HMGB2-202ENST00000438704 SAMD9LQ8IVG5 1584 aa11.26□□□□□ -0.61
HMGB2-202ENST00000438704 MAST1Q9Y2H9 1570 aa11.25□□□□□ -0.61
HMGB2-202ENST00000438704 ADGBQ8N7X0 1667 aa11.25□□□□□ -0.61
HMGB2-202ENST00000438704 PLA2G2EQ9NZK7 142 aa11.25□□□□□ -0.61
HMGB2-202ENST00000438704 CCDC141Q6ZP82 1450 aa11.25□□□□□ -0.61
HMGB2-202ENST00000438704 MAPKBP1O60336 1514 aa11.25□□□□□ -0.61
HMGB2-202ENST00000438704 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
HMGB2-202ENST00000438704 ARHGAP5Q13017 1502 aa11.24□□□□□ -0.61
HMGB2-202ENST00000438704 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
HMGB2-202ENST00000438704 EFCAB2Q5VUJ9 269 aa11.23□□□□□ -0.61
HMGB2-202ENST00000438704 KCTD12Q96CX2 325 aaKnown RBP11.23□□□□□ -0.61
HMGB2-202ENST00000438704 ANKRD30AQ9BXX3 1397 aa11.23□□□□□ -0.61
HMGB2-202ENST00000438704 RIMBP3CA6NJZ7 1639 aa11.23□□□□□ -0.61
HMGB2-202ENST00000438704 RIMBP3BA6NNM3 1639 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms