RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 RBM46Q8TBY0 533 aaKnown RBP10.21□□□□□ -0.77
SPEN-202ENST00000438066 GLMNQ92990 594 aa10.21□□□□□ -0.77
SPEN-202ENST00000438066 GZF1Q9H116 711 aaPredicted RBP10.21□□□□□ -0.77
SPEN-202ENST00000438066 FOSBP53539 338 aa10.21□□□□□ -0.78
SPEN-202ENST00000438066 TMCO4Q5TGY1 634 aa10.21□□□□□ -0.78
SPEN-202ENST00000438066 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.78
SPEN-202ENST00000438066 TBC1D2BQ9UPU7 963 aa10.21□□□□□ -0.78
SPEN-202ENST00000438066 PPP1R15AO75807 674 aaPredicted RBP10.2□□□□□ -0.78
SPEN-202ENST00000438066 QPCTQ16769 361 aa10.19□□□□□ -0.78
SPEN-202ENST00000438066 ZNF454Q8N9F8 522 aa10.19□□□□□ -0.78
SPEN-202ENST00000438066 ACIN1Q9UKV3 1341 aaKnown RBP10.19□□□□□ -0.78
SPEN-202ENST00000438066 POTEFA5A3E0 1075 aa10.19□□□□□ -0.78
SPEN-202ENST00000438066 PRSS12P56730 875 aa10.19□□□□□ -0.78
SPEN-202ENST00000438066 ZDHHC16Q969W1 377 aa10.19□□□□□ -0.78
SPEN-202ENST00000438066 PEG3Q9GZU2 1588 aa10.18□□□□□ -0.78
SPEN-202ENST00000438066 KDM4FA0A1W2PPD8 638 aa10.18□□□□□ -0.78
SPEN-202ENST00000438066 SPTLC1O15269 473 aa10.18□□□□□ -0.78
SPEN-202ENST00000438066 AP1G2O75843 785 aa10.18□□□□□ -0.78
SPEN-202ENST00000438066 TOP2AP11388 1531 aaKnown RBP10.18□□□□□ -0.78
SPEN-202ENST00000438066 RSBN1LQ6PCB5 846 aaPredicted RBP10.18□□□□□ -0.78
SPEN-202ENST00000438066 CDCA7LQ96GN5 454 aa10.18□□□□□ -0.78
SPEN-202ENST00000438066 PRM3Q9NNZ6 103 aa10.18□□□□□ -0.78
SPEN-202ENST00000438066 MOXD2PA6NHM9 499 aa10.17□□□□□ -0.78
SPEN-202ENST00000438066 CD46P15529 392 aa10.17□□□□□ -0.78
SPEN-202ENST00000438066 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
SPEN-202ENST00000438066 RCCD1A6NED2 376 aa10.16□□□□□ -0.78
SPEN-202ENST00000438066 RGS22Q8NE09 1264 aa10.16□□□□□ -0.78
SPEN-202ENST00000438066 MTMR7Q9Y216 660 aa10.16□□□□□ -0.78
SPEN-202ENST00000438066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.16□□□□□ -0.78
SPEN-202ENST00000438066 ADAM33Q9BZ11 813 aa10.16□□□□□ -0.78
SPEN-202ENST00000438066 NDUFV2P19404 249 aa10.15□□□□□ -0.78
SPEN-202ENST00000438066 MFAP1P55081 439 aaKnown RBP10.15□□□□□ -0.78
SPEN-202ENST00000438066 TUSC1Q2TAM9 212 aa10.15□□□□□ -0.78
SPEN-202ENST00000438066 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
SPEN-202ENST00000438066 PCDHB15Q9Y5E8 787 aa10.14□□□□□ -0.79
SPEN-202ENST00000438066 RTL5Q5HYW3 569 aaPredicted RBP10.13□□□□□ -0.79
SPEN-202ENST00000438066 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
SPEN-202ENST00000438066 SLC39A7Q92504 469 aa10.13□□□□□ -0.79
SPEN-202ENST00000438066 NUTM2BA6NNL0 878 aaPredicted RBP10.13□□□□□ -0.79
SPEN-202ENST00000438066 NUTM2EB1AL46 878 aaPredicted RBP10.13□□□□□ -0.79
SPEN-202ENST00000438066 LILRB3O75022 631 aa10.13□□□□□ -0.79
SPEN-202ENST00000438066 USP17L8P0C7I0 530 aa10.13□□□□□ -0.79
SPEN-202ENST00000438066 NUTM2DQ5VT03 806 aaPredicted RBP10.13□□□□□ -0.79
SPEN-202ENST00000438066 NUTM2AQ8IVF1 878 aaPredicted RBP10.13□□□□□ -0.79
SPEN-202ENST00000438066 SULF1Q8IWU6 871 aa10.13□□□□□ -0.79
SPEN-202ENST00000438066 DCBLD2Q96PD2 775 aa10.13□□□□□ -0.79
SPEN-202ENST00000438066 FAM198AQ9UFP1 575 aa10.13□□□□□ -0.79
SPEN-202ENST00000438066 SOCS7O14512 581 aa10.12□□□□□ -0.79
SPEN-202ENST00000438066 RFX1P22670 979 aa10.12□□□□□ -0.79
SPEN-202ENST00000438066 EIF4G1Q04637 1599 aaKnown RBP10.11□□□□□ -0.79
SPEN-202ENST00000438066 EYA1Q99502 592 aa10.11□□□□□ -0.79
SPEN-202ENST00000438066 PDE4CQ08493 712 aa10.1□□□□□ -0.79
SPEN-202ENST00000438066 HDGFL1Q5TGJ6 251 aa10.1□□□□□ -0.79
SPEN-202ENST00000438066 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
SPEN-202ENST00000438066 CABLES1Q8TDN4 633 aa10.1□□□□□ -0.79
SPEN-202ENST00000438066 FOXD4L4Q8WXT5 416 aaPredicted RBP10.1□□□□□ -0.79
SPEN-202ENST00000438066 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.1□□□□□ -0.79
SPEN-202ENST00000438066 C7P10643 843 aa10.1□□□□□ -0.79
SPEN-202ENST00000438066 PBXIP1Q96AQ6 731 aa10.1□□□□□ -0.79
SPEN-202ENST00000438066 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
SPEN-202ENST00000438066 NUDT7P0C024 238 aa10.09□□□□□ -0.79
SPEN-202ENST00000438066 METRNQ9UJH8 293 aa10.09□□□□□ -0.79
SPEN-202ENST00000438066 ADAMTS19Q8TE59 1207 aa10.08□□□□□ -0.8
SPEN-202ENST00000438066 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.08□□□□□ -0.8
SPEN-202ENST00000438066 GABBR2O75899 941 aa10.07□□□□□ -0.8
SPEN-202ENST00000438066 GJA5P36382 358 aa10.07□□□□□ -0.8
SPEN-202ENST00000438066 NUDT18Q6ZVK8 323 aa10.07□□□□□ -0.8
SPEN-202ENST00000438066 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.84e-7■■□□□ 11.9
SPEN-202ENST00000438066 GJD4Q96KN9 370 aaPredicted RBP10.07□□□□□ -0.8
SPEN-202ENST00000438066 NDUFB9Q9Y6M9 179 aa10.07□□□□□ -0.8
SPEN-202ENST00000438066 C3orf80F5H4A9 247 aa10.06□□□□□ -0.8
SPEN-202ENST00000438066 COL9A1P20849 921 aa10.06□□□□□ -0.8
SPEN-202ENST00000438066 ZNF428Q96B54 188 aa10.06□□□□□ -0.8
SPEN-202ENST00000438066 TSKSQ9UJT2 592 aa10.06□□□□□ -0.8
SPEN-202ENST00000438066 ATAD2BQ9ULI0 1458 aa10.06□□□□□ -0.8
SPEN-202ENST00000438066 DNAJB2P25686 324 aa10.05□□□□□ -0.8
SPEN-202ENST00000438066 RBM25P49756 843 aaKnown RBP10.04□□□□□ -0.8
SPEN-202ENST00000438066 CFAP70Q5T0N1 1121 aa10.04□□□□□ -0.8
SPEN-202ENST00000438066 RDH13Q8NBN7 331 aa10.04□□□□□ -0.8
SPEN-202ENST00000438066 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
SPEN-202ENST00000438066 CARNS1A5YM72 827 aa10.04□□□□□ -0.8
SPEN-202ENST00000438066 ARSIQ5FYB1 569 aa10.04□□□□□ -0.8
SPEN-202ENST00000438066 PRPF38BQ5VTL8 546 aaKnown RBP10.04□□□□□ -0.8
SPEN-202ENST00000438066 ZBTB3Q9H5J0 574 aa10.04□□□□□ -0.8
SPEN-202ENST00000438066 HMX1Q9NP08 348 aaPredicted RBP10.04□□□□□ -0.8
SPEN-202ENST00000438066 KDM4AO75164 1064 aa10.03□□□□□ -0.8
SPEN-202ENST00000438066 BRD1O95696 1058 aa10.03□□□□□ -0.8
SPEN-202ENST00000438066 CSB-PGBD3P0DP91 1061 aa10.03□□□□□ -0.8
SPEN-202ENST00000438066 TMEM134Q9H6X4 195 aa10.03□□□□□ -0.8
SPEN-202ENST00000438066 PATL2C9JE40 543 aaKnown RBP10.02□□□□□ -0.8
SPEN-202ENST00000438066 VAC14Q08AM6 782 aa10.02□□□□□ -0.8
SPEN-202ENST00000438066 PNMA3Q9UL41 463 aa10.02□□□□□ -0.8
SPEN-202ENST00000438066 CTDSPL2Q05D32 466 aa10.02□□□□□ -0.81
SPEN-202ENST00000438066 WASHC4Q2M389 1173 aa10.02□□□□□ -0.81
SPEN-202ENST00000438066 PPP1R12CQ9BZL4 782 aa10.02□□□□□ -0.81
SPEN-202ENST00000438066 USTQ9Y2C2 406 aa10.02□□□□□ -0.81
SPEN-202ENST00000438066 KCNA1Q09470 495 aa10.01□□□□□ -0.81
SPEN-202ENST00000438066 TATDN2Q93075 761 aa10.01□□□□□ -0.81
SPEN-202ENST00000438066 NBPF26B4DH59 902 aa10□□□□□ -0.81
SPEN-202ENST00000438066 GPR37L1O60883 481 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms