RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.43■■□□□ 1.981e-6■■■□□ 14.9
TOP2B-204ENST00000435706 ISY1Q9ULR0 285 aaKnown RBP27.43■■□□□ 1.98
TOP2B-204ENST00000435706 INTS3Q68E01 1043 aaKnown RBP27.43■■□□□ 1.98
TOP2B-204ENST00000435706 RASSF8Q8NHQ8 419 aa27.43■■□□□ 1.98
TOP2B-204ENST00000435706 AKNAQ7Z591 1439 aa27.42■■□□□ 1.98
TOP2B-204ENST00000435706 IFT57Q9NWB7 429 aa27.41■■□□□ 1.98
TOP2B-204ENST00000435706 CDCA7LQ96GN5 454 aa27.4■■□□□ 1.98
TOP2B-204ENST00000435706 MLECQ14165 292 aa27.4■■□□□ 1.98
TOP2B-204ENST00000435706 CCDC173Q0VFZ6 552 aa27.39■■□□□ 1.98
TOP2B-204ENST00000435706 HOMER1Q86YM7 354 aa27.39■■□□□ 1.98
TOP2B-204ENST00000435706 CHMP4CQ96CF2 233 aa27.39■■□□□ 1.98
TOP2B-204ENST00000435706 MSH5O43196 834 aa27.39■■□□□ 1.97
TOP2B-204ENST00000435706 RUNDC1Q96C34 613 aa27.39■■□□□ 1.97
TOP2B-204ENST00000435706 API5Q9BZZ5 524 aaKnown RBP27.38■■□□□ 1.97
TOP2B-204ENST00000435706 ANO2Q9NQ90 1003 aa27.38■■□□□ 1.97
TOP2B-204ENST00000435706 BICD2Q8TD16 824 aa27.38■■□□□ 1.97
TOP2B-204ENST00000435706 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
TOP2B-204ENST00000435706 RNF214Q8ND24 703 aa27.37■■□□□ 1.97
TOP2B-204ENST00000435706 RUFY2Q8WXA3 655 aa27.37■■□□□ 1.97
TOP2B-204ENST00000435706 ZKSCAN1P17029 563 aaPredicted RBP27.36■■□□□ 1.97
TOP2B-204ENST00000435706 TPD52L1Q16890 204 aaPredicted RBP27.36■■□□□ 1.97
TOP2B-204ENST00000435706 NUTM2DQ5VT03 806 aaPredicted RBP27.36■■□□□ 1.97
TOP2B-204ENST00000435706 CAVIN1Q6NZI2 390 aaKnown RBP27.36■■□□□ 1.97
TOP2B-204ENST00000435706 TPM1P09493 284 aa27.35■■□□□ 1.97
TOP2B-204ENST00000435706 RBM10P98175 930 aaKnown RBP27.35■■□□□ 1.97
TOP2B-204ENST00000435706 TSR1Q2NL82 804 aaKnown RBP27.35■■□□□ 1.97
TOP2B-204ENST00000435706 ZNF330Q9Y3S2 320 aaPredicted RBP27.35■■□□□ 1.97
TOP2B-204ENST00000435706 CDC45O75419 566 aa27.34■■□□□ 1.97
TOP2B-204ENST00000435706 SMC3Q9UQE7 1217 aa27.34■■□□□ 1.97
TOP2B-204ENST00000435706 PES1O00541 588 aaKnown RBP27.34■■□□□ 1.97
TOP2B-204ENST00000435706 TAF7LQ5H9L4 462 aa27.33■■□□□ 1.97
TOP2B-204ENST00000435706 VPS37CA5D8V6 355 aaPredicted RBP27.33■■□□□ 1.97
TOP2B-204ENST00000435706 SASS6Q6UVJ0 657 aa27.33■■□□□ 1.97
TOP2B-204ENST00000435706 ARGLU1Q9NWB6 273 aaPredicted RBP27.33■■□□□ 1.97
TOP2B-204ENST00000435706 FGD6Q6ZV73 1430 aa27.33■■□□□ 1.97
TOP2B-204ENST00000435706 KIF21BO75037 1637 aa27.32■■□□□ 1.96
TOP2B-204ENST00000435706 RIPK4P57078 832 aa27.32■■□□□ 1.96
TOP2B-204ENST00000435706 ADAMTS8Q9UP79 889 aa27.32■■□□□ 1.96
TOP2B-204ENST00000435706 CCDC70Q6NSX1 233 aa27.31■■□□□ 1.96
TOP2B-204ENST00000435706 ROCK1Q13464 1354 aa27.31■■□□□ 1.96
TOP2B-204ENST00000435706 SMG6Q86US8 1419 aaKnown RBP27.3■■□□□ 1.96
TOP2B-204ENST00000435706 AMPHP49418 695 aa27.29■■□□□ 1.96
TOP2B-204ENST00000435706 TOMM22Q9NS69 142 aa27.29■■□□□ 1.96
TOP2B-204ENST00000435706 PDZRN3Q9UPQ7 1066 aa27.28■■□□□ 1.96
TOP2B-204ENST00000435706 EVC2Q86UK5 1308 aa27.28■■□□□ 1.96
TOP2B-204ENST00000435706 MBD3O95983 291 aa27.28■■□□□ 1.96
TOP2B-204ENST00000435706 MNS1Q8NEH6 495 aa27.28■■□□□ 1.96
TOP2B-204ENST00000435706 GRPEL1Q9HAV7 217 aa27.28■■□□□ 1.96
TOP2B-204ENST00000435706 HMGN5P82970 282 aaKnown RBP27.27■■□□□ 1.96
TOP2B-204ENST00000435706 RRP9O43818 475 aaKnown RBP27.27■■□□□ 1.96
TOP2B-204ENST00000435706 MIA2Q96PC5 1412 aa27.26■■□□□ 1.96
TOP2B-204ENST00000435706 DIAPH1O60610 1272 aaKnown RBP27.26■■□□□ 1.95
TOP2B-204ENST00000435706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.24■■□□□ 1.95
TOP2B-204ENST00000435706 TSPY26PQ9H489 355 aa27.24■■□□□ 1.95
TOP2B-204ENST00000435706 PRPF40AO75400 957 aaKnown RBP27.23■■□□□ 1.95
TOP2B-204ENST00000435706 CSB-PGBD3P0DP91 1061 aa27.23■■□□□ 1.95
TOP2B-204ENST00000435706 NOM1Q5C9Z4 860 aaKnown RBP27.23■■□□□ 1.95
TOP2B-204ENST00000435706 CCDC66A2RUB6 948 aa27.22■■□□□ 1.95
TOP2B-204ENST00000435706 MYOM3Q5VTT5 1437 aa27.22■■□□□ 1.95
TOP2B-204ENST00000435706 BCL11BQ9C0K0 894 aaPredicted RBP27.22■■□□□ 1.95
TOP2B-204ENST00000435706 LETM1O95202 739 aaPredicted RBP27.21■■□□□ 1.95
TOP2B-204ENST00000435706 RNF20Q5VTR2 975 aa27.21■■□□□ 1.95
TOP2B-204ENST00000435706 LRRC9Q6ZRR7 1453 aa27.21■■□□□ 1.95
TOP2B-204ENST00000435706 PDE4CQ08493 712 aa27.21■■□□□ 1.95
TOP2B-204ENST00000435706 ESPNB1AK53 854 aa27.2■■□□□ 1.94
TOP2B-204ENST00000435706 PDE3AQ14432 1141 aa27.2■■□□□ 1.94
TOP2B-204ENST00000435706 RRBP1Q9P2E9 1410 aaKnown RBP27.2■■□□□ 1.94
TOP2B-204ENST00000435706 CCDC73Q6ZRK6 1079 aa27.2■■□□□ 1.94
TOP2B-204ENST00000435706 LTV1Q96GA3 475 aaPredicted RBP27.2■■□□□ 1.94
TOP2B-204ENST00000435706 CCDC9Q9Y3X0 531 aaKnown RBP27.2■■□□□ 1.94
TOP2B-204ENST00000435706 COG3Q96JB2 828 aa27.19■■□□□ 1.94
TOP2B-204ENST00000435706 FBXW7Q969H0 707 aa27.18■■□□□ 1.94
TOP2B-204ENST00000435706 WASHC2CQ9Y4E1 1318 aa27.18■■□□□ 1.94
TOP2B-204ENST00000435706 IFIT2P09913 472 aaKnown RBP27.18■■□□□ 1.94
TOP2B-204ENST00000435706 IPO7O95373 1038 aaKnown RBP27.17■■□□□ 1.94
TOP2B-204ENST00000435706 CPLX2Q6PUV4 134 aaKnown RBP27.17■■□□□ 1.94
TOP2B-204ENST00000435706 RABEP1Q15276 862 aa27.17■■□□□ 1.94
TOP2B-204ENST00000435706 NGDNQ8NEJ9 315 aaKnown RBP27.17■■□□□ 1.94
TOP2B-204ENST00000435706 PNISRQ8TF01 805 aaKnown RBP27.16■■□□□ 1.94
TOP2B-204ENST00000435706 CUX1P39880 1505 aa27.16■■□□□ 1.94
TOP2B-204ENST00000435706 GNAI1P63096 354 aa27.16■■□□□ 1.94
TOP2B-204ENST00000435706 ACBD3Q9H3P7 528 aa27.15■■□□□ 1.94
TOP2B-204ENST00000435706 MCM4P33991 863 aa27.15■■□□□ 1.94
TOP2B-204ENST00000435706 PDS5BQ9NTI5 1447 aa27.15■■□□□ 1.94
TOP2B-204ENST00000435706 HSP90B2PQ58FF3 399 aa27.14■■□□□ 1.94
TOP2B-204ENST00000435706 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.14■■□□□ 1.94
TOP2B-204ENST00000435706 CEP89Q96ST8 783 aa27.14■■□□□ 1.93
TOP2B-204ENST00000435706 TRIM5Q9C035 493 aa27.14■■□□□ 1.93
TOP2B-204ENST00000435706 UQCRHLA0A096LP55 91 aa27.13■■□□□ 1.93
TOP2B-204ENST00000435706 UQCRHP07919 91 aa27.13■■□□□ 1.93
TOP2B-204ENST00000435706 TRIM29Q14134 588 aa27.13■■□□□ 1.93
TOP2B-204ENST00000435706 CCDC184Q52MB2 194 aa27.13■■□□□ 1.93
TOP2B-204ENST00000435706 CPLX1O14810 134 aa27.13■■□□□ 1.93
TOP2B-204ENST00000435706 AKAP17AQ02040 695 aaKnown RBP27.13■■□□□ 1.93
TOP2B-204ENST00000435706 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.13■■□□□ 1.93
TOP2B-204ENST00000435706 HOOK1Q9UJC3 728 aaKnown RBP27.13■■□□□ 1.93
TOP2B-204ENST00000435706 ANKRD20A12PQ8NF67 263 aa27.12■■□□□ 1.93
TOP2B-204ENST00000435706 CWC15Q9P013 229 aaKnown RBP27.12■■□□□ 1.93
TOP2B-204ENST00000435706 C9orf78Q9NZ63 289 aaPredicted RBP27.12■■□□□ 1.93
TOP2B-204ENST00000435706 PPP2R1AP30153 589 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms