RNA–Protein interactions for RNA: ENST00000435149.1

NCSTN-206, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-206ENST00000435149 DIP2AQ14689 1571 aa13.65□□□□□ -0.22
NCSTN-206ENST00000435149 SENP3-EIF4A1A0A087X0R7 540 aa13.63□□□□□ -0.23
NCSTN-206ENST00000435149 ZNF219Q9P2Y4 722 aaPredicted RBP13.63□□□□□ -0.23
NCSTN-206ENST00000435149 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
NCSTN-206ENST00000435149 HRCP23327 699 aa13.61□□□□□ -0.23
NCSTN-206ENST00000435149 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
NCSTN-206ENST00000435149 KDM5AP29375 1690 aaKnown RBP13.6□□□□□ -0.23
NCSTN-206ENST00000435149 ERVK-7P63135 1459 aa13.6□□□□□ -0.23
NCSTN-206ENST00000435149 BLMP54132 1417 aaPredicted RBP13.59□□□□□ -0.23
NCSTN-206ENST00000435149 DSG3P32926 999 aa13.59□□□□□ -0.23
NCSTN-206ENST00000435149 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.24
NCSTN-206ENST00000435149 DEFB132Q7Z7B7 95 aa13.58□□□□□ -0.24
NCSTN-206ENST00000435149 SLC26A8Q96RN1 970 aa13.58□□□□□ -0.24
NCSTN-206ENST00000435149 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
NCSTN-206ENST00000435149 GPATCH8Q9UKJ3 1502 aaKnown RBP13.58□□□□□ -0.24
NCSTN-206ENST00000435149 RTEL1-TNFRSF6BF6WH68 1400 aa13.57□□□□□ -0.24
NCSTN-206ENST00000435149 PSDA5PKW4 1024 aaPredicted RBP13.57□□□□□ -0.24
NCSTN-206ENST00000435149 TRPC5Q9UL62 973 aaPredicted RBP13.57□□□□□ -0.24
NCSTN-206ENST00000435149 SETD5Q9C0A6 1442 aa13.56□□□□□ -0.24
NCSTN-206ENST00000435149 BCL9LQ86UU0 1499 aa13.55□□□□□ -0.24
NCSTN-206ENST00000435149 TMEM2Q9UHN6 1383 aa13.55□□□□□ -0.24
NCSTN-206ENST00000435149 TET3O43151 1660 aa13.54□□□□□ -0.24
NCSTN-206ENST00000435149 USP21Q9UK80 565 aa13.54□□□□□ -0.24
NCSTN-206ENST00000435149 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
NCSTN-206ENST00000435149 CFDP1Q9UEE9 299 aaPredicted RBP13.53□□□□□ -0.24
NCSTN-206ENST00000435149 BRINP3Q76B58 766 aa13.52□□□□□ -0.25
NCSTN-206ENST00000435149 NCOA3Q9Y6Q9 1424 aa13.52□□□□□ -0.25
NCSTN-206ENST00000435149 MAST1Q9Y2H9 1570 aa13.52□□□□□ -0.25
NCSTN-206ENST00000435149 ATRNO75882 1429 aa13.51□□□□□ -0.25
NCSTN-206ENST00000435149 ADAMTS2O95450 1211 aa13.51□□□□□ -0.25
NCSTN-206ENST00000435149 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
NCSTN-206ENST00000435149 LRRC59Q96AG4 307 aaKnown RBP13.51□□□□□ -0.25
NCSTN-206ENST00000435149 CAMSAP2Q08AD1 1489 aa13.5□□□□□ -0.25
NCSTN-206ENST00000435149 ATF3P18847 181 aa13.5□□□□□ -0.25
NCSTN-206ENST00000435149 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
NCSTN-206ENST00000435149 C14orf37Q86TY3 774 aa13.49□□□□□ -0.25
NCSTN-206ENST00000435149 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
NCSTN-206ENST00000435149 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
NCSTN-206ENST00000435149 ABCB7O75027 752 aa13.48□□□□□ -0.25
NCSTN-206ENST00000435149 FNBP4Q8N3X1 1017 aaPredicted RBP13.48□□□□□ -0.25
NCSTN-206ENST00000435149 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
NCSTN-206ENST00000435149 MROH1Q8NDA8 1641 aa13.47□□□□□ -0.25
NCSTN-206ENST00000435149 C1QTNF8P60827 252 aa13.47□□□□□ -0.25
NCSTN-206ENST00000435149 C19orf44Q9H6X5 657 aa13.47□□□□□ -0.25
NCSTN-206ENST00000435149 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
NCSTN-206ENST00000435149 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
NCSTN-206ENST00000435149 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
NCSTN-206ENST00000435149 ZNF784Q8NCA9 323 aaPredicted RBP13.45□□□□□ -0.26
NCSTN-206ENST00000435149 STAG3Q9UJ98 1225 aa13.45□□□□□ -0.26
NCSTN-206ENST00000435149 ZNF644Q9H582 1327 aaPredicted RBP13.44□□□□□ -0.26
NCSTN-206ENST00000435149 PIK3C2BO00750 1634 aa13.44□□□□□ -0.26
NCSTN-206ENST00000435149 BCANQ96GW7 911 aa13.43□□□□□ -0.26
NCSTN-206ENST00000435149 CCNB3Q8WWL7 1395 aa13.43□□□□□ -0.26
NCSTN-206ENST00000435149 UNC13BO14795 1591 aa13.42□□□□□ -0.26
NCSTN-206ENST00000435149 CHD2O14647 1828 aaKnown RBP13.42□□□□□ -0.26
NCSTN-206ENST00000435149 EFCAB6Q5THR3 1501 aa13.42□□□□□ -0.26
NCSTN-206ENST00000435149 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
NCSTN-206ENST00000435149 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
NCSTN-206ENST00000435149 GJD4Q96KN9 370 aaPredicted RBP13.41□□□□□ -0.26
NCSTN-206ENST00000435149 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
NCSTN-206ENST00000435149 EEA1Q15075 1411 aa13.39□□□□□ -0.27
NCSTN-206ENST00000435149 BAG6P46379 1132 aa13.38□□□□□ -0.27
NCSTN-206ENST00000435149 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
NCSTN-206ENST00000435149 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
NCSTN-206ENST00000435149 DDX17Q92841 729 aaKnown RBP13.37□□□□□ -0.27
NCSTN-206ENST00000435149 ARHGAP31Q2M1Z3 1444 aa13.36□□□□□ -0.27
NCSTN-206ENST00000435149 CEP152O94986 1710 aa13.36□□□□□ -0.27
NCSTN-206ENST00000435149 CCDC141Q6ZP82 1450 aa13.36□□□□□ -0.27
NCSTN-206ENST00000435149 DCCP43146 1447 aa13.35□□□□□ -0.27
NCSTN-206ENST00000435149 SPHKAPQ2M3C7 1700 aa13.35□□□□□ -0.27
NCSTN-206ENST00000435149 MST1RQ04912 1400 aa13.34□□□□□ -0.27
NCSTN-206ENST00000435149 IDI1Q13907 227 aa13.34□□□□□ -0.27
NCSTN-206ENST00000435149 PLEKHG1Q9ULL1 1385 aa13.32□□□□□ -0.28
NCSTN-206ENST00000435149 PPP1R15AO75807 674 aaPredicted RBP13.32□□□□□ -0.28
NCSTN-206ENST00000435149 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
NCSTN-206ENST00000435149 TBX22Q9Y458 520 aa13.32□□□□□ -0.28
NCSTN-206ENST00000435149 CEP350Q5VT06 3117 aa13.31□□□□□ -0.28
NCSTN-206ENST00000435149 BRWD3Q6RI45 1802 aa13.31□□□□□ -0.28
NCSTN-206ENST00000435149 RALGAPBQ86X10 1494 aa13.3□□□□□ -0.28
NCSTN-206ENST00000435149 GLI3P10071 1580 aa13.3□□□□□ -0.28
NCSTN-206ENST00000435149 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
NCSTN-206ENST00000435149 EIF2AK4Q9P2K8 1649 aaKnown RBP13.3□□□□□ -0.28
NCSTN-206ENST00000435149 NINLQ9Y2I6 1382 aa13.3□□□□□ -0.28
NCSTN-206ENST00000435149 SEPT12Q8IYM1 358 aa13.28□□□□□ -0.28
NCSTN-206ENST00000435149 PPP1R1BQ9UD71 204 aaPredicted RBP13.28□□□□□ -0.28
NCSTN-206ENST00000435149 ADGRB3O60242 1522 aa13.28□□□□□ -0.28
NCSTN-206ENST00000435149 UBTFP17480 764 aaKnown RBP13.27□□□□□ -0.29
NCSTN-206ENST00000435149 MTUS2Q5JR59 1369 aa13.27□□□□□ -0.29
NCSTN-206ENST00000435149 TSPY4P0CV99 314 aa13.26□□□□□ -0.29
NCSTN-206ENST00000435149 TSPY10P0CW01 314 aa13.26□□□□□ -0.29
NCSTN-206ENST00000435149 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
NCSTN-206ENST00000435149 CAMTA1Q9Y6Y1 1673 aa13.26□□□□□ -0.29
NCSTN-206ENST00000435149 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.25□□□□□ -0.29
NCSTN-206ENST00000435149 FYCO1Q9BQS8 1478 aa13.25□□□□□ -0.29
NCSTN-206ENST00000435149 ZFYVE9O95405 1425 aa13.25□□□□□ -0.29
NCSTN-206ENST00000435149 PIK3R4Q99570 1358 aa13.25□□□□□ -0.29
NCSTN-206ENST00000435149 SOS2Q07890 1332 aaPredicted RBP13.25□□□□□ -0.29
NCSTN-206ENST00000435149 UNC5CLQ8IV45 518 aa13.25□□□□□ -0.29
NCSTN-206ENST00000435149 COL22A1Q8NFW1 1626 aaPredicted RBP13.24□□□□□ -0.29
NCSTN-206ENST00000435149 UTRNP46939 3433 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms