RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 KIAA1107Q9UPP5 1409 aa9.34□□□□□ -0.91
CPSF6-202ENST00000435070 ZMYM4Q5VZL5 1548 aa9.34□□□□□ -0.91
CPSF6-202ENST00000435070 PMFBP1Q8TBY8 1022 aa9.34□□□□□ -0.91
CPSF6-202ENST00000435070 BCL11BQ9C0K0 894 aaPredicted RBP9.34□□□□□ -0.91
CPSF6-202ENST00000435070 CBX1P83916 185 aa9.34□□□□□ -0.91
CPSF6-202ENST00000435070 ISY1Q9ULR0 285 aaKnown RBP9.34□□□□□ -0.91
CPSF6-202ENST00000435070 DAPK1P53355 1430 aa9.34□□□□□ -0.91
CPSF6-202ENST00000435070 IGSF3O75054 1194 aa9.34□□□□□ -0.91
CPSF6-202ENST00000435070 ABCC5O15440 1437 aa9.34□□□□□ -0.91
CPSF6-202ENST00000435070 FAM177BA6PVY3 158 aa9.34□□□□□ -0.91
CPSF6-202ENST00000435070 SSFA2P28290 1259 aa9.34□□□□□ -0.91
CPSF6-202ENST00000435070 EHBP1L1Q8N3D4 1523 aa9.34□□□□□ -0.91
CPSF6-202ENST00000435070 DISP3Q9P2K9 1392 aa9.33□□□□□ -0.92
CPSF6-202ENST00000435070 CFDP1Q9UEE9 299 aaPredicted RBP9.33□□□□□ -0.92
CPSF6-202ENST00000435070 GCC2Q8IWJ2 1684 aa9.33□□□□□ -0.92
CPSF6-202ENST00000435070 PDE3AQ14432 1141 aa9.33□□□□□ -0.92
CPSF6-202ENST00000435070 SMAP1Q8IYB5 467 aaPredicted RBP9.33□□□□□ -0.92
CPSF6-202ENST00000435070 ZNF692Q9BU19 519 aaPredicted RBP9.33□□□□□ -0.92
CPSF6-202ENST00000435070 CAVIN1Q6NZI2 390 aaKnown RBP9.33□□□□□ -0.92
CPSF6-202ENST00000435070 ZNF521Q96K83 1311 aa9.33□□□□□ -0.92
CPSF6-202ENST00000435070 RWDD1Q9H446 243 aaPredicted RBP9.33□□□□□ -0.92
CPSF6-202ENST00000435070 PZPP20742 1482 aa9.33□□□□□ -0.92
CPSF6-202ENST00000435070 THOC2Q8NI27 1593 aaKnown RBP9.33□□□□□ -0.92
CPSF6-202ENST00000435070 E9PSI1 815 aa9.32□□□□□ -0.92
CPSF6-202ENST00000435070 TMF1P82094 1093 aa9.32□□□□□ -0.92
CPSF6-202ENST00000435070 GOLGA6L22H0YM25 854 aa9.32□□□□□ -0.92
CPSF6-202ENST00000435070 MAPK8IP2Q13387 824 aaPredicted RBP9.32□□□□□ -0.92
CPSF6-202ENST00000435070 PPP1R9BQ96SB3 815 aa9.31□□□□□ -0.92
CPSF6-202ENST00000435070 GRIN2BQ13224 1484 aa9.31□□□□□ -0.92
CPSF6-202ENST00000435070 TDRD9Q8NDG6 1382 aaKnown RBP9.31□□□□□ -0.92
CPSF6-202ENST00000435070 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
CPSF6-202ENST00000435070 SKOR2Q2VWA4 1001 aaPredicted RBP9.31□□□□□ -0.92
CPSF6-202ENST00000435070 CDK13Q14004 1512 aaKnown RBP9.31□□□□□ -0.92
CPSF6-202ENST00000435070 TCOF1Q13428 1488 aaKnown RBP9.31□□□□□ -0.92
CPSF6-202ENST00000435070 MBD5Q9P267 1494 aa9.31□□□□□ -0.92
CPSF6-202ENST00000435070 RNF214Q8ND24 703 aa9.31□□□□□ -0.92
CPSF6-202ENST00000435070 RALGAPBQ86X10 1494 aa9.31□□□□□ -0.92
CPSF6-202ENST00000435070 CHMP4BQ9H444 224 aaKnown RBP9.31□□□□□ -0.92
CPSF6-202ENST00000435070 PTMAP06454 111 aaKnown RBP9.3□□□□□ -0.92
CPSF6-202ENST00000435070 MCTP1Q6DN14 999 aa9.3□□□□□ -0.92
CPSF6-202ENST00000435070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.3□□□□□ -0.925e-7■□□□□ 11.3
CPSF6-202ENST00000435070 NKTRP30414 1462 aaKnown RBP9.3□□□□□ -0.92
CPSF6-202ENST00000435070 VGLL3A8MV65 326 aa9.3□□□□□ -0.92
CPSF6-202ENST00000435070 CD2BP2O95400 341 aaKnown RBP9.3□□□□□ -0.92
CPSF6-202ENST00000435070 PLEKHH2Q8IVE3 1493 aa9.29□□□□□ -0.92
CPSF6-202ENST00000435070 RBSNQ9H1K0 784 aa9.29□□□□□ -0.92
CPSF6-202ENST00000435070 TPRNQ4KMQ1 711 aa9.29□□□□□ -0.92
CPSF6-202ENST00000435070 FOXD4L5Q5VV16 416 aaPredicted RBP9.29□□□□□ -0.92
CPSF6-202ENST00000435070 FOXD4L4Q8WXT5 416 aaPredicted RBP9.29□□□□□ -0.92
CPSF6-202ENST00000435070 TESK2Q96S53 571 aa9.29□□□□□ -0.92
CPSF6-202ENST00000435070 FTSJ3Q8IY81 847 aaKnown RBP9.29□□□□□ -0.92
CPSF6-202ENST00000435070 SENP3Q9H4L4 574 aaPredicted RBP9.29□□□□□ -0.92
CPSF6-202ENST00000435070 RBM27Q9P2N5 1060 aaKnown RBP9.29□□□□□ -0.92
CPSF6-202ENST00000435070 CAMSAP2Q08AD1 1489 aa9.28□□□□□ -0.92
CPSF6-202ENST00000435070 RAB3GAP1Q15042 981 aa9.28□□□□□ -0.92
CPSF6-202ENST00000435070 ROCK1Q13464 1354 aa9.28□□□□□ -0.92
CPSF6-202ENST00000435070 SPDYE4A6NLX3 237 aa9.28□□□□□ -0.92
CPSF6-202ENST00000435070 TRMT2AQ8IZ69 625 aaKnown RBP9.28□□□□□ -0.92
CPSF6-202ENST00000435070 LNPKQ9C0E8 428 aa9.28□□□□□ -0.92
CPSF6-202ENST00000435070 DYNC1I1O14576 645 aa9.28□□□□□ -0.92
CPSF6-202ENST00000435070 CHAMP1Q96JM3 812 aa9.28□□□□□ -0.92
CPSF6-202ENST00000435070 LRRIQ1Q96JM4 1722 aa9.28□□□□□ -0.92
CPSF6-202ENST00000435070 ZSCAN20P17040 1043 aaPredicted RBP9.27□□□□□ -0.92
CPSF6-202ENST00000435070 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.92
CPSF6-202ENST00000435070 NOL7Q9UMY1 257 aaKnown RBP9.27□□□□□ -0.92
CPSF6-202ENST00000435070 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
CPSF6-202ENST00000435070 KIF14Q15058 1648 aa9.27□□□□□ -0.93
CPSF6-202ENST00000435070 GTF2E1P29083 439 aaPredicted RBP9.27□□□□□ -0.93
CPSF6-202ENST00000435070 DMTNQ08495 405 aa9.27□□□□□ -0.93
CPSF6-202ENST00000435070 PPP4R3BQ5MIZ7 849 aa9.27□□□□□ -0.93
CPSF6-202ENST00000435070 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.27□□□□□ -0.93
CPSF6-202ENST00000435070 PLCD3Q8N3E9 789 aa9.27□□□□□ -0.93
CPSF6-202ENST00000435070 GAS2L2Q8NHY3 880 aa9.27□□□□□ -0.93
CPSF6-202ENST00000435070 BAG4O95429 457 aaKnown RBP9.26□□□□□ -0.93
CPSF6-202ENST00000435070 CCDC94Q9BW85 323 aaPredicted RBP9.26□□□□□ -0.93
CPSF6-202ENST00000435070 WWC1Q8IX03 1113 aa9.26□□□□□ -0.93
CPSF6-202ENST00000435070 ZKSCAN5Q9Y2L8 839 aa9.26□□□□□ -0.93
CPSF6-202ENST00000435070 TERF1P54274 439 aa9.26□□□□□ -0.93
CPSF6-202ENST00000435070 SASS6Q6UVJ0 657 aa9.26□□□□□ -0.93
CPSF6-202ENST00000435070 CALRP27797 417 aaKnown RBP9.26□□□□□ -0.93
CPSF6-202ENST00000435070 MTERF4Q7Z6M4 381 aaKnown RBP9.26□□□□□ -0.93
CPSF6-202ENST00000435070 SMC5Q8IY18 1101 aa9.26□□□□□ -0.93
CPSF6-202ENST00000435070 ZNF830Q96NB3 372 aaPredicted RBP9.26□□□□□ -0.93
CPSF6-202ENST00000435070 NAP1L2Q9ULW6 460 aaPredicted RBP9.26□□□□□ -0.93
CPSF6-202ENST00000435070 ZBTB22O15209 634 aa9.25□□□□□ -0.93
CPSF6-202ENST00000435070 ITPRIPQ8IWB1 547 aa9.25□□□□□ -0.93
CPSF6-202ENST00000435070 UHRF1BP1Q6BDS2 1440 aa9.25□□□□□ -0.93
CPSF6-202ENST00000435070 PRPF40AO75400 957 aaKnown RBP9.25□□□□□ -0.93
CPSF6-202ENST00000435070 ZSCAN23Q3MJ62 389 aa9.25□□□□□ -0.93
CPSF6-202ENST00000435070 STAC3Q96MF2 364 aa9.25□□□□□ -0.93
CPSF6-202ENST00000435070 KLHL40Q2TBA0 621 aa9.25□□□□□ -0.93
CPSF6-202ENST00000435070 ZNF608Q9ULD9 1512 aaPredicted RBP9.25□□□□□ -0.93
CPSF6-202ENST00000435070 KIAA0586Q9BVV6 1533 aa9.25□□□□□ -0.93
CPSF6-202ENST00000435070 ZNF500O60304 480 aaPredicted RBP9.25□□□□□ -0.93
CPSF6-202ENST00000435070 C17orf53Q8N3J3 647 aaPredicted RBP9.25□□□□□ -0.93
CPSF6-202ENST00000435070 EPRSP07814 1512 aaKnown RBP9.24□□□□□ -0.93
CPSF6-202ENST00000435070 ARHGEF11O15085 1522 aa9.24□□□□□ -0.93
CPSF6-202ENST00000435070 CSPP1Q1MSJ5 1256 aa9.24□□□□□ -0.93
CPSF6-202ENST00000435070 CIZ1Q9ULV3 898 aaPredicted RBP9.24□□□□□ -0.93
CPSF6-202ENST00000435070 ANKRD50Q9ULJ7 1429 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms