RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 B4GALNT3Q6L9W6 998 aa15.24■□□□□ 0.03
UBE3B-203ENST00000434735 NLRP13Q86W25 1043 aa15.24■□□□□ 0.03
UBE3B-203ENST00000434735 DHX16O60231 1041 aaKnown RBP15.24■□□□□ 0.03
UBE3B-203ENST00000434735 CENPJQ9HC77 1338 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-203ENST00000434735 PLIN1O60240 522 aa15.23■□□□□ 0.03
UBE3B-203ENST00000434735 RASSF8Q8NHQ8 419 aa15.23■□□□□ 0.03
UBE3B-203ENST00000434735 PRAM1Q96QH2 718 aa15.23■□□□□ 0.03
UBE3B-203ENST00000434735 DDX58O95786 925 aaKnown RBP15.23■□□□□ 0.03
UBE3B-203ENST00000434735 BICDL1Q6ZP65 573 aa15.22■□□□□ 0.03
UBE3B-203ENST00000434735 PANK3Q9H999 370 aa15.22■□□□□ 0.03
UBE3B-203ENST00000434735 HMMRO75330 724 aa15.22■□□□□ 0.03
UBE3B-203ENST00000434735 CLUAP1Q96AJ1 413 aa15.22■□□□□ 0.03
UBE3B-203ENST00000434735 GGNBP2Q9H3C7 697 aa15.22■□□□□ 0.03
UBE3B-203ENST00000434735 HMOX1P09601 288 aa15.22■□□□□ 0.03
UBE3B-203ENST00000434735 HSP90B1P14625 803 aaKnown RBP15.22■□□□□ 0.03
UBE3B-203ENST00000434735 PLCB2Q00722 1185 aa15.22■□□□□ 0.03
UBE3B-203ENST00000434735 DIAPH1O60610 1272 aaKnown RBP15.21■□□□□ 0.03
UBE3B-203ENST00000434735 RIC3Q7Z5B4 369 aa15.2■□□□□ 0.02
UBE3B-203ENST00000434735 SLC4A3P48751 1232 aa15.2■□□□□ 0.02
UBE3B-203ENST00000434735 C8orf37Q96NL8 207 aa15.2■□□□□ 0.02
UBE3B-203ENST00000434735 KIF6Q6ZMV9 814 aa15.19■□□□□ 0.02
UBE3B-203ENST00000434735 FYB1O15117 783 aa15.19■□□□□ 0.02
UBE3B-203ENST00000434735 CABP4P57796 275 aa15.19■□□□□ 0.02
UBE3B-203ENST00000434735 HSP90AB1P08238 724 aaKnown RBP15.18■□□□□ 0.02
UBE3B-203ENST00000434735 MYOM3Q5VTT5 1437 aa15.18■□□□□ 0.02
UBE3B-203ENST00000434735 APPP05067 770 aa15.17■□□□□ 0.02
UBE3B-203ENST00000434735 RALBP1Q15311 655 aa15.17■□□□□ 0.02
UBE3B-203ENST00000434735 CCDC27Q2M243 656 aa15.17■□□□□ 0.02
UBE3B-203ENST00000434735 SUPT16HQ9Y5B9 1047 aaKnown RBP15.17■□□□□ 0.02
UBE3B-203ENST00000434735 RUSC2Q8N2Y8 1516 aa15.17■□□□□ 0.02
UBE3B-203ENST00000434735 PLEKHO1Q53GL0 409 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-203ENST00000434735 ANO8Q9HCE9 1232 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-203ENST00000434735 GRM1Q13255 1194 aa15.16■□□□□ 0.02
UBE3B-203ENST00000434735 SLC52A1Q9NWF4 448 aa15.16■□□□□ 0.02
UBE3B-203ENST00000434735 TSPYL4Q9UJ04 414 aa15.16■□□□□ 0.02
UBE3B-203ENST00000434735 SMG6Q86US8 1419 aaKnown RBP15.16■□□□□ 0.02
UBE3B-203ENST00000434735 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
UBE3B-203ENST00000434735 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-203ENST00000434735 TOPBP1Q92547 1522 aa15.15■□□□□ 0.02
UBE3B-203ENST00000434735 CFAP70Q5T0N1 1121 aa15.15■□□□□ 0.02
UBE3B-203ENST00000434735 FOXO3O43524 673 aa15.14■□□□□ 0.01
UBE3B-203ENST00000434735 MIA2Q96PC5 1412 aa15.14■□□□□ 0.01
UBE3B-203ENST00000434735 TIMELESSQ9UNS1 1208 aa15.13■□□□□ 0.01
UBE3B-203ENST00000434735 FKBP5Q13451 457 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-203ENST00000434735 WWC1Q8IX03 1113 aa15.13■□□□□ 0.01
UBE3B-203ENST00000434735 IKQ13123 557 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-203ENST00000434735 L1TD1Q5T7N2 865 aaKnown RBP15.12■□□□□ 0.01
UBE3B-203ENST00000434735 PDE4CQ08493 712 aa15.12■□□□□ 0.01
UBE3B-203ENST00000434735 ZNF428Q96B54 188 aa15.12■□□□□ 0.01
UBE3B-203ENST00000434735 SPG7Q9UQ90 795 aa15.12■□□□□ 0.01
UBE3B-203ENST00000434735 HMGB2P26583 209 aaKnown RBP15.12■□□□□ 0.01
UBE3B-203ENST00000434735 LMTK3Q96Q04 1460 aa15.11■□□□□ 0.01
UBE3B-203ENST00000434735 MTMR7Q9Y216 660 aa15.11■□□□□ 0.01
UBE3B-203ENST00000434735 C16orf71Q8IYS4 520 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-203ENST00000434735 CFTRP13569 1480 aa15.1■□□□□ 0.01
UBE3B-203ENST00000434735 TTLL12Q14166 644 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-203ENST00000434735 CDK19Q9BWU1 502 aa15.1■□□□□ 0.01
UBE3B-203ENST00000434735 WWC3Q9ULE0 1092 aa15.1■□□□□ 0.01
UBE3B-203ENST00000434735 FBXO31Q5XUX0 539 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-203ENST00000434735 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
UBE3B-203ENST00000434735 NEUROD6Q96NK8 337 aa15.09■□□□□ 0.01
UBE3B-203ENST00000434735 ANKRD50Q9ULJ7 1429 aa15.09■□□□□ 0.01
UBE3B-203ENST00000434735 RIPK4P57078 832 aa15.09■□□□□ 0.01
UBE3B-203ENST00000434735 POLA1P09884 1462 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-203ENST00000434735 AKAP17AQ02040 695 aaKnown RBP15.08■□□□□ 0.01
UBE3B-203ENST00000434735 ZPR1O75312 459 aa15.08■□□□□ 0
UBE3B-203ENST00000434735 CHAF1AQ13111 956 aaPredicted RBP15.07■□□□□ 0
UBE3B-203ENST00000434735 AKNAQ7Z591 1439 aa15.07■□□□□ 0
UBE3B-203ENST00000434735 WDHD1O75717 1129 aaPredicted RBP15.07■□□□□ 0
UBE3B-203ENST00000434735 ZNF530Q6P9A1 599 aaPredicted RBP15.07■□□□□ 0
UBE3B-203ENST00000434735 CABP1Q9NZU7 370 aa15.07■□□□□ 0
UBE3B-203ENST00000434735 NOL8Q76FK4 1167 aaKnown RBP15.06■□□□□ 0
UBE3B-203ENST00000434735 AMOTL2Q9Y2J4 779 aa15.06■□□□□ 0
UBE3B-203ENST00000434735 MTHFSP49914 203 aa15.06■□□□□ 0
UBE3B-203ENST00000434735 KIAA2012Q0VF49 1180 aa15.06■□□□□ 0
UBE3B-203ENST00000434735 NBPF8Q3BBV2 869 aa15.06■□□□□ 0
UBE3B-203ENST00000434735 NBPF14Q5TI25 921 aa15.06■□□□□ 0
UBE3B-203ENST00000434735 MSH6P52701 1360 aa15.06■□□□□ 0
UBE3B-203ENST00000434735 PHF14O94880 888 aa15.05■□□□□ 0
UBE3B-203ENST00000434735 G3BP1Q13283 466 aaKnown RBP eCLIP15.05■□□□□ 0
UBE3B-203ENST00000434735 CADPS2Q86UW7 1296 aa15.05■□□□□ 0
UBE3B-203ENST00000434735 CCDC43Q96MW1 224 aaKnown RBP15.05■□□□□ 0
UBE3B-203ENST00000434735 CREBRFQ8IUR6 639 aa15.05■□□□□ -0
UBE3B-203ENST00000434735 LRRFIP1Q32MZ4 808 aaKnown RBP15.05■□□□□ -0
UBE3B-203ENST00000434735 RILPL2Q969X0 211 aa15.05■□□□□ -0
UBE3B-203ENST00000434735 RWDD1Q9H446 243 aaPredicted RBP15.05■□□□□ -0
UBE3B-203ENST00000434735 SYNE3Q6ZMZ3 975 aa15.05■□□□□ -0
UBE3B-203ENST00000434735 SPRYD3Q8NCJ5 442 aa15.04■□□□□ -0
UBE3B-203ENST00000434735 EXOC5O00471 708 aa15.04■□□□□ -0
UBE3B-203ENST00000434735 RTEL1-TNFRSF6BF6WH68 1400 aa15.03■□□□□ -0
UBE3B-203ENST00000434735 MPRIPQ6WCQ1 1025 aa15.03■□□□□ -0
UBE3B-203ENST00000434735 IFIT2P09913 472 aaKnown RBP15.03■□□□□ -0
UBE3B-203ENST00000434735 AK7Q96M32 723 aa15.02■□□□□ -0
UBE3B-203ENST00000434735 PTCD1O75127 700 aaKnown RBP15.02□□□□□ -0.01
UBE3B-203ENST00000434735 MYCNP04198 464 aaPredicted RBP15.02□□□□□ -0.01
UBE3B-203ENST00000434735 CLEC11AQ9Y240 323 aa15.02□□□□□ -0.01
UBE3B-203ENST00000434735 ATP2B2Q01814 1243 aa15.02□□□□□ -0.01
UBE3B-203ENST00000434735 ZSCAN29Q8IWY8 852 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-203ENST00000434735 CNNM1Q9NRU3 951 aa15.01□□□□□ -0.01
UBE3B-203ENST00000434735 PLEKHH2Q8IVE3 1493 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms