RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 UGGT2Q9NYU1 1516 aa10.89□□□□□ -0.67
COL17A1-204ENST00000433822 IQGAP2Q13576 1575 aa10.88□□□□□ -0.67
COL17A1-204ENST00000433822 UPF1Q92900 1129 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL17A1-204ENST00000433822 BCL2L12Q9HB09 334 aa10.88□□□□□ -0.67
COL17A1-204ENST00000433822 DIP2BQ9P265 1576 aa10.88□□□□□ -0.67
COL17A1-204ENST00000433822 TIMELESSQ9UNS1 1208 aa10.88□□□□□ -0.67
COL17A1-204ENST00000433822 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
COL17A1-204ENST00000433822 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
COL17A1-204ENST00000433822 CRISPLD2Q9H0B8 497 aa10.86□□□□□ -0.67
COL17A1-204ENST00000433822 SHROOM2Q13796 1616 aa10.86□□□□□ -0.67
COL17A1-204ENST00000433822 RAB3GAP2Q9H2M9 1393 aa10.86□□□□□ -0.67
COL17A1-204ENST00000433822 SUPT6HQ7KZ85 1726 aaKnown RBP10.86□□□□□ -0.67
COL17A1-204ENST00000433822 PTPN5P54829 565 aa10.85□□□□□ -0.67
COL17A1-204ENST00000433822 MAPKBP1O60336 1514 aa10.84□□□□□ -0.67
COL17A1-204ENST00000433822 PPP1R15BQ5SWA1 713 aa10.84□□□□□ -0.67
COL17A1-204ENST00000433822 ADGRL1O94910 1474 aa10.84□□□□□ -0.67
COL17A1-204ENST00000433822 LRRIQ1Q96JM4 1722 aa10.84□□□□□ -0.67
COL17A1-204ENST00000433822 AKNAQ7Z591 1439 aa10.84□□□□□ -0.67
COL17A1-204ENST00000433822 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
COL17A1-204ENST00000433822 ABCC10Q5T3U5 1492 aa10.83□□□□□ -0.68
COL17A1-204ENST00000433822 PTPREP23469 700 aa10.83□□□□□ -0.68
COL17A1-204ENST00000433822 FOSBP53539 338 aa10.83□□□□□ -0.68
COL17A1-204ENST00000433822 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
COL17A1-204ENST00000433822 MYOM3Q5VTT5 1437 aa10.83□□□□□ -0.68
COL17A1-204ENST00000433822 TCOF1Q13428 1488 aaKnown RBP10.82□□□□□ -0.68
COL17A1-204ENST00000433822 MTUS2Q5JR59 1369 aa10.82□□□□□ -0.68
COL17A1-204ENST00000433822 BHMG1C9JSJ3 638 aaPredicted RBP10.82□□□□□ -0.68
COL17A1-204ENST00000433822 CENPBP07199 599 aaPredicted RBP10.82□□□□□ -0.68
COL17A1-204ENST00000433822 PDE4AP27815 886 aa10.82□□□□□ -0.68
COL17A1-204ENST00000433822 KIAA0586Q9BVV6 1533 aa10.82□□□□□ -0.68
COL17A1-204ENST00000433822 ANO8Q9HCE9 1232 aaPredicted RBP10.81□□□□□ -0.68
COL17A1-204ENST00000433822 HFM1A2PYH4 1435 aa10.81□□□□□ -0.68
COL17A1-204ENST00000433822 NCOA2Q15596 1464 aa10.81□□□□□ -0.68
COL17A1-204ENST00000433822 GOLGA8CPA6NN73 597 aa10.8□□□□□ -0.68
COL17A1-204ENST00000433822 RGS20O76081 388 aa10.8□□□□□ -0.68
COL17A1-204ENST00000433822 FAM69CQ0P6D2 419 aa10.8□□□□□ -0.68
COL17A1-204ENST00000433822 IFFO2Q5TF58 517 aa10.8□□□□□ -0.68
COL17A1-204ENST00000433822 MIA2Q96PC5 1412 aa10.8□□□□□ -0.68
COL17A1-204ENST00000433822 THSD4Q6ZMP0 1018 aa10.79□□□□□ -0.68
COL17A1-204ENST00000433822 JPH4Q96JJ6 628 aa10.79□□□□□ -0.68
COL17A1-204ENST00000433822 ZBED2Q9BTP6 218 aa10.79□□□□□ -0.68
COL17A1-204ENST00000433822 GRIN2AQ12879 1464 aa10.79□□□□□ -0.68
COL17A1-204ENST00000433822 MRPL50Q8N5N7 158 aaKnown RBP10.78□□□□□ -0.68
COL17A1-204ENST00000433822 EPRSP07814 1512 aaKnown RBP10.78□□□□□ -0.68
COL17A1-204ENST00000433822 ADCY10Q96PN6 1610 aa10.77□□□□□ -0.68
COL17A1-204ENST00000433822 PPRC1Q5VV67 1664 aaKnown RBP10.77□□□□□ -0.69
COL17A1-204ENST00000433822 ZDHHC16Q969W1 377 aa10.77□□□□□ -0.69
COL17A1-204ENST00000433822 KIAA0556O60303 1618 aa10.76□□□□□ -0.69
COL17A1-204ENST00000433822 NUP160Q12769 1436 aa10.76□□□□□ -0.69
COL17A1-204ENST00000433822 UACAQ9BZF9 1416 aa10.76□□□□□ -0.69
COL17A1-204ENST00000433822 EVI5O60447 810 aa10.76□□□□□ -0.69
COL17A1-204ENST00000433822 P3H3Q8IVL6 736 aa10.76□□□□□ -0.69
COL17A1-204ENST00000433822 WNT2BQ93097 391 aa10.76□□□□□ -0.69
COL17A1-204ENST00000433822 NCKAP5LQ9HCH0 1330 aa10.76□□□□□ -0.69
COL17A1-204ENST00000433822 PTPN23Q9H3S7 1636 aa10.76□□□□□ -0.69
COL17A1-204ENST00000433822 FBXO41Q8TF61 875 aa10.75□□□□□ -0.69
COL17A1-204ENST00000433822 NBPF3Q9H094 633 aa10.75□□□□□ -0.69
COL17A1-204ENST00000433822 GCC2Q8IWJ2 1684 aa10.74□□□□□ -0.69
COL17A1-204ENST00000433822 MAGI3Q5TCQ9 1506 aa10.74□□□□□ -0.69
COL17A1-204ENST00000433822 FAM50AQ14320 339 aaKnown RBP10.73□□□□□ -0.69
COL17A1-204ENST00000433822 ADAM33Q9BZ11 813 aa10.73□□□□□ -0.69
COL17A1-204ENST00000433822 LMTK3Q96Q04 1460 aa10.73□□□□□ -0.69
COL17A1-204ENST00000433822 DISP1Q96F81 1524 aa10.73□□□□□ -0.69
COL17A1-204ENST00000433822 NAIPQ13075 1403 aa10.72□□□□□ -0.69
COL17A1-204ENST00000433822 MAP3K9P80192 1104 aa10.71□□□□□ -0.69
COL17A1-204ENST00000433822 RAPGEF6Q8TEU7 1601 aa10.71□□□□□ -0.69
COL17A1-204ENST00000433822 DDX27Q96GQ7 796 aaKnown RBP10.71□□□□□ -0.69
COL17A1-204ENST00000433822 LARP6Q9BRS8 491 aaKnown RBP10.71□□□□□ -0.69
COL17A1-204ENST00000433822 A0A0G2JS52 829 aa10.7□□□□□ -0.7
COL17A1-204ENST00000433822 ROCK1Q13464 1354 aa10.69□□□□□ -0.7
COL17A1-204ENST00000433822 PTPRKQ15262 1439 aa10.68□□□□□ -0.7
COL17A1-204ENST00000433822 PRG4Q92954 1404 aaPredicted RBP10.68□□□□□ -0.7
COL17A1-204ENST00000433822 ATP1B4Q9UN42 357 aaPredicted RBP10.68□□□□□ -0.7
COL17A1-204ENST00000433822 NUP153P49790 1475 aaKnown RBP10.68□□□□□ -0.7
COL17A1-204ENST00000433822 ITGAEP38570 1179 aa10.67□□□□□ -0.7
COL17A1-204ENST00000433822 NEUROD1Q13562 356 aa10.67□□□□□ -0.7
COL17A1-204ENST00000433822 ILDR2Q71H61 639 aa10.67□□□□□ -0.7
COL17A1-204ENST00000433822 IRX2Q9BZI1 471 aaPredicted RBP10.67□□□□□ -0.7
COL17A1-204ENST00000433822 PPP1R3GB7ZBB8 358 aa10.66□□□□□ -0.7
COL17A1-204ENST00000433822 GTPBP6O43824 516 aaPredicted RBP10.66□□□□□ -0.7
COL17A1-204ENST00000433822 DNMT1P26358 1616 aaKnown RBP10.66□□□□□ -0.7
COL17A1-204ENST00000433822 MFSD10Q14728 455 aa10.65□□□□□ -0.7
COL17A1-204ENST00000433822 RABGEF1Q9UJ41 708 aa10.65□□□□□ -0.7
COL17A1-204ENST00000433822 CDK11AQ9UQ88 783 aaPredicted RBP10.65□□□□□ -0.7
COL17A1-204ENST00000433822 COL17A1Q9UMD9 1497 aaPredicted RBP10.65□□□□□ -0.7
COL17A1-204ENST00000433822 ITSN2Q9NZM3 1697 aa10.65□□□□□ -0.7
COL17A1-204ENST00000433822 CARMIL2Q6F5E8 1435 aa10.65□□□□□ -0.7
COL17A1-204ENST00000433822 CDK13Q14004 1512 aaKnown RBP10.64□□□□□ -0.71
COL17A1-204ENST00000433822 TROQ12816 1431 aaPredicted RBP10.64□□□□□ -0.71
COL17A1-204ENST00000433822 PPP1R15AO75807 674 aaPredicted RBP10.63□□□□□ -0.71
COL17A1-204ENST00000433822 ANKK1Q8NFD2 765 aa10.63□□□□□ -0.71
COL17A1-204ENST00000433822 PCDHGA10Q9Y5H3 936 aa10.63□□□□□ -0.71
COL17A1-204ENST00000433822 FBXW7Q969H0 707 aa10.62□□□□□ -0.71
COL17A1-204ENST00000433822 EMILIN3Q9NT22 766 aa10.61□□□□□ -0.71
COL17A1-204ENST00000433822 ADGRL2O95490 1459 aa10.61□□□□□ -0.71
COL17A1-204ENST00000433822 PROX2Q3B8N5 592 aa10.6□□□□□ -0.71
COL17A1-204ENST00000433822 TYW1BQ6NUM6 668 aa10.6□□□□□ -0.71
COL17A1-204ENST00000433822 LAPTM4BQ86VI4 370 aa10.6□□□□□ -0.71
COL17A1-204ENST00000433822 ABCA8O94911 1581 aa10.6□□□□□ -0.71
COL17A1-204ENST00000433822 DAPK1P53355 1430 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms