RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
CNKSR3-202ENST00000433165 SLC52A1Q9NWF4 448 aa10.59□□□□□ -0.71
CNKSR3-202ENST00000433165 TIMELESSQ9UNS1 1208 aa10.59□□□□□ -0.71
CNKSR3-202ENST00000433165 SLIT1O75093 1534 aa10.59□□□□□ -0.71
CNKSR3-202ENST00000433165 CPS1P31327 1500 aa10.59□□□□□ -0.71
CNKSR3-202ENST00000433165 NCKAP5LQ9HCH0 1330 aa10.59□□□□□ -0.71
CNKSR3-202ENST00000433165 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
CNKSR3-202ENST00000433165 NOS1P29475 1434 aa10.58□□□□□ -0.72
CNKSR3-202ENST00000433165 NPHP4O75161 1426 aaPredicted RBP10.58□□□□□ -0.72
CNKSR3-202ENST00000433165 EID1Q9Y6B2 187 aa10.58□□□□□ -0.72
CNKSR3-202ENST00000433165 IQGAP1P46940 1657 aa10.58□□□□□ -0.72
CNKSR3-202ENST00000433165 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
CNKSR3-202ENST00000433165 ILDR1Q86SU0 546 aaPredicted RBP10.57□□□□□ -0.72
CNKSR3-202ENST00000433165 ADGRB3O60242 1522 aa10.57□□□□□ -0.72
CNKSR3-202ENST00000433165 NEURL4Q96JN8 1562 aa10.57□□□□□ -0.72
CNKSR3-202ENST00000433165 PIK3C2BO00750 1634 aa10.57□□□□□ -0.72
CNKSR3-202ENST00000433165 ARHGAP23Q9P227 1491 aa10.57□□□□□ -0.72
CNKSR3-202ENST00000433165 LTBP4Q8N2S1 1624 aa10.56□□□□□ -0.72
CNKSR3-202ENST00000433165 NOP58Q9Y2X3 529 aaKnown RBP10.56□□□□□ -0.72
CNKSR3-202ENST00000433165 SCAF11Q99590 1463 aaKnown RBP10.56□□□□□ -0.72
CNKSR3-202ENST00000433165 PPP4R2Q9NY27 417 aa10.56□□□□□ -0.72
CNKSR3-202ENST00000433165 SYNMO15061 1565 aa10.55□□□□□ -0.72
CNKSR3-202ENST00000433165 NUP155O75694 1391 aa10.55□□□□□ -0.72
CNKSR3-202ENST00000433165 HFM1A2PYH4 1435 aa10.54□□□□□ -0.72
CNKSR3-202ENST00000433165 SETD5Q9C0A6 1442 aa10.54□□□□□ -0.72
CNKSR3-202ENST00000433165 TMEM2Q9UHN6 1383 aa10.54□□□□□ -0.72
CNKSR3-202ENST00000433165 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
CNKSR3-202ENST00000433165 CFAP65Q6ZU64 1925 aaKnown RBP10.53□□□□□ -0.72
CNKSR3-202ENST00000433165 E9PCH4 1651 aa10.53□□□□□ -0.72
CNKSR3-202ENST00000433165 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.52□□□□□ -0.73
CNKSR3-202ENST00000433165 NAIPQ13075 1403 aa10.51□□□□□ -0.73
CNKSR3-202ENST00000433165 TXNDC2Q86VQ3 553 aa10.51□□□□□ -0.73
CNKSR3-202ENST00000433165 SPHKAPQ2M3C7 1700 aa10.51□□□□□ -0.73
CNKSR3-202ENST00000433165 IRX6P78412 446 aaPredicted RBP10.5□□□□□ -0.73
CNKSR3-202ENST00000433165 IDI1Q13907 227 aa10.5□□□□□ -0.73
CNKSR3-202ENST00000433165 PAK3O75914 559 aaPredicted RBP10.49□□□□□ -0.73
CNKSR3-202ENST00000433165 HNRNPUQ00839 825 aaKnown RBP eCLIP10.49□□□□□ -0.73
CNKSR3-202ENST00000433165 ZNF335Q9H4Z2 1342 aaPredicted RBP10.49□□□□□ -0.73
CNKSR3-202ENST00000433165 TMEM131LA2VDJ0 1609 aa10.49□□□□□ -0.73
CNKSR3-202ENST00000433165 NBR1Q14596 966 aa10.49□□□□□ -0.73
CNKSR3-202ENST00000433165 SIN3AQ96ST3 1273 aa10.49□□□□□ -0.73
CNKSR3-202ENST00000433165 DIP2AQ14689 1571 aa10.48□□□□□ -0.73
CNKSR3-202ENST00000433165 UBE2Q2Q8WVN8 375 aa10.47□□□□□ -0.73
CNKSR3-202ENST00000433165 TRPM2O94759 1503 aa10.47□□□□□ -0.73
CNKSR3-202ENST00000433165 PLEKHG1Q9ULL1 1385 aa10.47□□□□□ -0.73
CNKSR3-202ENST00000433165 RIMS2Q9UQ26 1411 aa10.46□□□□□ -0.73
CNKSR3-202ENST00000433165 TOM1O60784 492 aa10.46□□□□□ -0.74
CNKSR3-202ENST00000433165 NKTRP30414 1462 aaKnown RBP10.45□□□□□ -0.74
CNKSR3-202ENST00000433165 ZFYVE9O95405 1425 aa10.45□□□□□ -0.74
CNKSR3-202ENST00000433165 RTL5Q5HYW3 569 aaPredicted RBP10.45□□□□□ -0.74
CNKSR3-202ENST00000433165 KIF1BO60333 1816 aa10.44□□□□□ -0.74
CNKSR3-202ENST00000433165 LTKP29376 864 aa10.44□□□□□ -0.74
CNKSR3-202ENST00000433165 NWD1Q149M9 1564 aa10.44□□□□□ -0.74
CNKSR3-202ENST00000433165 HIRIP3Q9BW71 556 aaPredicted RBP10.44□□□□□ -0.74
CNKSR3-202ENST00000433165 PIK3R4Q99570 1358 aa10.44□□□□□ -0.74
CNKSR3-202ENST00000433165 WASHC2AQ641Q2 1341 aa10.44□□□□□ -0.74
CNKSR3-202ENST00000433165 IPO9Q96P70 1041 aaKnown RBP10.44□□□□□ -0.74
CNKSR3-202ENST00000433165 UBAP1LF5GYI3 381 aa10.43□□□□□ -0.74
CNKSR3-202ENST00000433165 CHGAP10645 457 aaKnown RBP10.43□□□□□ -0.74
CNKSR3-202ENST00000433165 IL27Q8NEV9 243 aa10.43□□□□□ -0.74
CNKSR3-202ENST00000433165 MYO5BQ9ULV0 1848 aa10.43□□□□□ -0.74
CNKSR3-202ENST00000433165 B4GALNT3Q6L9W6 998 aa10.42□□□□□ -0.74
CNKSR3-202ENST00000433165 KCNA6P17658 529 aa10.42□□□□□ -0.74
CNKSR3-202ENST00000433165 SLC4A1APQ9BWU0 796 aaKnown RBP10.42□□□□□ -0.74
CNKSR3-202ENST00000433165 LRRC7Q96NW7 1537 aa10.42□□□□□ -0.74
CNKSR3-202ENST00000433165 NCOA3Q9Y6Q9 1424 aa10.41□□□□□ -0.74
CNKSR3-202ENST00000433165 TBX22Q9Y458 520 aa10.41□□□□□ -0.74
CNKSR3-202ENST00000433165 RPGRIP1LQ68CZ1 1315 aa10.41□□□□□ -0.74
CNKSR3-202ENST00000433165 CLTCL1P53675 1640 aa10.4□□□□□ -0.74
CNKSR3-202ENST00000433165 ANP32AP39687 249 aaKnown RBP10.4□□□□□ -0.74
CNKSR3-202ENST00000433165 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
CNKSR3-202ENST00000433165 CCDC136Q96JN2 1154 aa10.4□□□□□ -0.74
CNKSR3-202ENST00000433165 SETBP1Q9Y6X0 1596 aa10.39□□□□□ -0.75
CNKSR3-202ENST00000433165 ZNF326Q5BKZ1 582 aaKnown RBP10.39□□□□□ -0.75
CNKSR3-202ENST00000433165 STRCP1A6NGW2 1772 aa10.39□□□□□ -0.75
CNKSR3-202ENST00000433165 ZBED9Q6R2W3 1325 aa10.39□□□□□ -0.75
CNKSR3-202ENST00000433165 CHD2O14647 1828 aaKnown RBP10.38□□□□□ -0.75
CNKSR3-202ENST00000433165 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
CNKSR3-202ENST00000433165 CCDC144AA2RUR9 1427 aa10.37□□□□□ -0.75
CNKSR3-202ENST00000433165 TONSLQ96HA7 1378 aa10.37□□□□□ -0.75
CNKSR3-202ENST00000433165 VGFO15240 615 aaPredicted RBP10.36□□□□□ -0.75
CNKSR3-202ENST00000433165 USP35Q9P2H5 1018 aa10.36□□□□□ -0.75
CNKSR3-202ENST00000433165 MSH6P52701 1360 aa10.36□□□□□ -0.75
CNKSR3-202ENST00000433165 NEXMIFQ5QGS0 1516 aa10.36□□□□□ -0.75
CNKSR3-202ENST00000433165 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
CNKSR3-202ENST00000433165 SLC26A8Q96RN1 970 aa10.35□□□□□ -0.75
CNKSR3-202ENST00000433165 ADAMTS13Q76LX8 1427 aa10.35□□□□□ -0.75
CNKSR3-202ENST00000433165 MPHOSPH9Q99550 1183 aa10.35□□□□□ -0.75
CNKSR3-202ENST00000433165 TMEM94Q12767 1356 aa10.34□□□□□ -0.75
CNKSR3-202ENST00000433165 XIRP1Q702N8 1843 aaKnown RBP10.34□□□□□ -0.75
CNKSR3-202ENST00000433165 ANKRD30BQ9BXX2 1392 aa10.33□□□□□ -0.76
CNKSR3-202ENST00000433165 RNF123Q5XPI4 1314 aa10.33□□□□□ -0.76
CNKSR3-202ENST00000433165 RTN4Q9NQC3 1192 aaKnown RBP10.33□□□□□ -0.76
CNKSR3-202ENST00000433165 PPLO60437 1756 aa10.33□□□□□ -0.76
CNKSR3-202ENST00000433165 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
CNKSR3-202ENST00000433165 DCCP43146 1447 aa10.32□□□□□ -0.76
CNKSR3-202ENST00000433165 SMG6Q86US8 1419 aaKnown RBP10.32□□□□□ -0.76
CNKSR3-202ENST00000433165 NRXN3Q9Y4C0 1643 aa10.32□□□□□ -0.76
CNKSR3-202ENST00000433165 XRN1Q8IZH2 1706 aaKnown RBP10.32□□□□□ -0.76
CNKSR3-202ENST00000433165 PIP4K2BP78356 416 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms