RNA–Protein interactions for RNA: ENST00000432331.1

LINC00390-201, long intergenic non-protein coding RNA 390, humanhuman

TSL 5 BASIC

Gene LINC00390, Length 340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00390-201ENST00000432331 VWDEQ8N2E2 1590 aa9.12□□□□□ -0.95
LINC00390-201ENST00000432331 AAMPQ13685 434 aa9.12□□□□□ -0.95
LINC00390-201ENST00000432331 DDRGK1Q96HY6 314 aa9.12□□□□□ -0.95
LINC00390-201ENST00000432331 LMTK2Q8IWU2 1503 aa9.11□□□□□ -0.95
LINC00390-201ENST00000432331 ZC3H13Q5T200 1668 aaKnown RBP9.11□□□□□ -0.95
LINC00390-201ENST00000432331 HSP90AA2PQ14568 343 aaPredicted RBP9.11□□□□□ -0.95
LINC00390-201ENST00000432331 ABCC3O15438 1527 aa9.1□□□□□ -0.95
LINC00390-201ENST00000432331 ARID4BQ4LE39 1312 aaPredicted RBP9.1□□□□□ -0.95
LINC00390-201ENST00000432331 PPP1R15AO75807 674 aaPredicted RBP9.1□□□□□ -0.95
LINC00390-201ENST00000432331 PDIA4P13667 645 aaKnown RBP9.1□□□□□ -0.95
LINC00390-201ENST00000432331 GGT6Q6P531 493 aa9.1□□□□□ -0.95
LINC00390-201ENST00000432331 EFCAB6Q5THR3 1501 aa9.1□□□□□ -0.95
LINC00390-201ENST00000432331 SIGLEC1Q9BZZ2 1709 aa9.09□□□□□ -0.95
LINC00390-201ENST00000432331 SLC4A2P04920 1241 aa9.09□□□□□ -0.95
LINC00390-201ENST00000432331 CALD1Q05682 793 aaKnown RBP9.09□□□□□ -0.95
LINC00390-201ENST00000432331 ZNF326Q5BKZ1 582 aaKnown RBP9.09□□□□□ -0.95
LINC00390-201ENST00000432331 MPHOSPH9Q99550 1183 aa9.09□□□□□ -0.95
LINC00390-201ENST00000432331 TET3O43151 1660 aa9.09□□□□□ -0.95
LINC00390-201ENST00000432331 HSP90AA1P07900 732 aaKnown RBP9.08□□□□□ -0.96
LINC00390-201ENST00000432331 RPRD2Q5VT52 1461 aaKnown RBP9.08□□□□□ -0.96
LINC00390-201ENST00000432331 CNTLNQ9NXG0 1405 aa9.07□□□□□ -0.96
LINC00390-201ENST00000432331 BRPF3Q9ULD4 1205 aa9.07□□□□□ -0.96
LINC00390-201ENST00000432331 CAMSAP1Q5T5Y3 1602 aa9.06□□□□□ -0.96
LINC00390-201ENST00000432331 PKD2Q13563 968 aa9.06□□□□□ -0.96
LINC00390-201ENST00000432331 ESF1Q9H501 851 aaKnown RBP9.06□□□□□ -0.96
LINC00390-201ENST00000432331 ARHGAP31Q2M1Z3 1444 aa9.05□□□□□ -0.96
LINC00390-201ENST00000432331 NCLP19338 710 aaKnown RBP9.05□□□□□ -0.96
LINC00390-201ENST00000432331 RBM10P98175 930 aaKnown RBP9.05□□□□□ -0.96
LINC00390-201ENST00000432331 MLECQ14165 292 aa9.05□□□□□ -0.96
LINC00390-201ENST00000432331 TAF7LQ5H9L4 462 aa9.05□□□□□ -0.96
LINC00390-201ENST00000432331 CEP152O94986 1710 aa9.05□□□□□ -0.96
LINC00390-201ENST00000432331 NPATQ14207 1427 aa9.05□□□□□ -0.96
LINC00390-201ENST00000432331 MS4A1P11836 297 aa9.04□□□□□ -0.96
LINC00390-201ENST00000432331 TRPM2O94759 1503 aa9.04□□□□□ -0.96
LINC00390-201ENST00000432331 L1TD1Q5T7N2 865 aaKnown RBP9.03□□□□□ -0.96
LINC00390-201ENST00000432331 ARXQ96QS3 562 aa9.03□□□□□ -0.96
LINC00390-201ENST00000432331 CCDC144AA2RUR9 1427 aa9.03□□□□□ -0.96
LINC00390-201ENST00000432331 E9PCH4 1651 aa9.03□□□□□ -0.96
LINC00390-201ENST00000432331 CLTCQ00610 1675 aaKnown RBP9.03□□□□□ -0.96
LINC00390-201ENST00000432331 ANKRD30BQ9BXX2 1392 aa9.02□□□□□ -0.97
LINC00390-201ENST00000432331 MROH2AA6NES4 1674 aa9.02□□□□□ -0.97
LINC00390-201ENST00000432331 TCERG1O14776 1098 aaKnown RBP9.02□□□□□ -0.97
LINC00390-201ENST00000432331 U3KPZ7 1027 aaPredicted RBP9.02□□□□□ -0.97
LINC00390-201ENST00000432331 PTPRTO14522 1441 aa9.02□□□□□ -0.97
LINC00390-201ENST00000432331 ZBED9Q6R2W3 1325 aa9.02□□□□□ -0.97
LINC00390-201ENST00000432331 TPM2P07951 284 aa9.01□□□□□ -0.97
LINC00390-201ENST00000432331 CACNB1Q02641 598 aaPredicted RBP9.01□□□□□ -0.97
LINC00390-201ENST00000432331 C1QBPQ07021 282 aaKnown RBP9.01□□□□□ -0.97
LINC00390-201ENST00000432331 FER1L4A9Z1Z3 1794 aa9.01□□□□□ -0.97
LINC00390-201ENST00000432331 MADDQ8WXG6 1647 aa9.01□□□□□ -0.97
LINC00390-201ENST00000432331 ERVK-7P63135 1459 aa9.01□□□□□ -0.97
LINC00390-201ENST00000432331 SPHKAPQ2M3C7 1700 aa9□□□□□ -0.97
LINC00390-201ENST00000432331 NOS1P29475 1434 aa9□□□□□ -0.97
LINC00390-201ENST00000432331 MAP7D2Q96T17 732 aa9□□□□□ -0.97
LINC00390-201ENST00000432331 PDCL3Q9H2J4 239 aa9□□□□□ -0.97
LINC00390-201ENST00000432331 PLA2R1Q13018 1463 aa9□□□□□ -0.97
LINC00390-201ENST00000432331 ZMYM3Q14202 1370 aa8.99□□□□□ -0.97
LINC00390-201ENST00000432331 SPATA31D1Q6ZQQ2 1576 aa8.99□□□□□ -0.97
LINC00390-201ENST00000432331 CLCN1P35523 988 aa8.99□□□□□ -0.97
LINC00390-201ENST00000432331 HNRNPUQ00839 825 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC00390-201ENST00000432331 PNNQ9H307 717 aaKnown RBP8.99□□□□□ -0.97
LINC00390-201ENST00000432331 RNF123Q5XPI4 1314 aa8.99□□□□□ -0.97
LINC00390-201ENST00000432331 TONSLQ96HA7 1378 aa8.99□□□□□ -0.97
LINC00390-201ENST00000432331 SMG6Q86US8 1419 aaKnown RBP8.98□□□□□ -0.97
LINC00390-201ENST00000432331 ADAMTSL3P82987 1691 aa8.98□□□□□ -0.97
LINC00390-201ENST00000432331 PREX1Q8TCU6 1659 aa8.98□□□□□ -0.97
LINC00390-201ENST00000432331 DDX10Q13206 875 aaKnown RBP8.98□□□□□ -0.97
LINC00390-201ENST00000432331 SYNMO15061 1565 aa8.98□□□□□ -0.97
LINC00390-201ENST00000432331 CLTCL1P53675 1640 aa8.98□□□□□ -0.97
LINC00390-201ENST00000432331 RIMS1Q86UR5 1692 aaKnown RBP8.97□□□□□ -0.97
LINC00390-201ENST00000432331 UGGT1Q9NYU2 1555 aa8.96□□□□□ -0.97
LINC00390-201ENST00000432331 B4GALNT3Q6L9W6 998 aa8.96□□□□□ -0.98
LINC00390-201ENST00000432331 FRAT1Q92837 279 aaPredicted RBP8.96□□□□□ -0.98
LINC00390-201ENST00000432331 SIN3AQ96ST3 1273 aa8.96□□□□□ -0.98
LINC00390-201ENST00000432331 TNRQ92752 1358 aa8.96□□□□□ -0.98
LINC00390-201ENST00000432331 ADGRB3O60242 1522 aa8.95□□□□□ -0.98
LINC00390-201ENST00000432331 NEURL4Q96JN8 1562 aa8.95□□□□□ -0.98
LINC00390-201ENST00000432331 PIK3C2BO00750 1634 aa8.95□□□□□ -0.98
LINC00390-201ENST00000432331 NFKBIBQ15653 356 aa8.95□□□□□ -0.98
LINC00390-201ENST00000432331 NLRP1Q9C000 1473 aa8.95□□□□□ -0.98
LINC00390-201ENST00000432331 C3P01024 1663 aa8.94□□□□□ -0.98
LINC00390-201ENST00000432331 FBXO31Q5XUX0 539 aaPredicted RBP8.94□□□□□ -0.98
LINC00390-201ENST00000432331 NAP1L5Q96NT1 182 aaPredicted RBP8.94□□□□□ -0.98
LINC00390-201ENST00000432331 SLC52A1Q9NWF4 448 aa8.94□□□□□ -0.98
LINC00390-201ENST00000432331 SPATA31E1Q6ZUB1 1445 aa8.94□□□□□ -0.98
LINC00390-201ENST00000432331 PTPRMP28827 1452 aa8.94□□□□□ -0.98
LINC00390-201ENST00000432331 A0A0U1RQG5 324 aaPredicted RBP8.93□□□□□ -0.98
LINC00390-201ENST00000432331 MTERF4Q7Z6M4 381 aaKnown RBP8.93□□□□□ -0.98
LINC00390-201ENST00000432331 MYO3AQ8NEV4 1616 aa8.92□□□□□ -0.98
LINC00390-201ENST00000432331 TERF1P54274 439 aa8.92□□□□□ -0.98
LINC00390-201ENST00000432331 PRDM4Q9UKN5 801 aa8.92□□□□□ -0.98
LINC00390-201ENST00000432331 LAS1LQ9Y4W2 734 aaKnown RBP8.92□□□□□ -0.98
LINC00390-201ENST00000432331 CEBPAP49715 358 aaPredicted RBP8.91□□□□□ -0.98
LINC00390-201ENST00000432331 SMAP1Q8IYB5 467 aaPredicted RBP8.91□□□□□ -0.98
LINC00390-201ENST00000432331 FOXD4L1Q9NU39 408 aa8.91□□□□□ -0.98
LINC00390-201ENST00000432331 ISY1Q9ULR0 285 aaKnown RBP8.91□□□□□ -0.98
LINC00390-201ENST00000432331 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.98
LINC00390-201ENST00000432331 IRX6P78412 446 aaPredicted RBP8.9□□□□□ -0.98
LINC00390-201ENST00000432331 BACH2Q9BYV9 841 aa8.9□□□□□ -0.98
LINC00390-201ENST00000432331 A2ML1A8K2U0 1454 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1189.6 ms