RNA–Protein interactions for RNA: ENST00000431873.6

ALK-202, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 5

Gene ALK, Length 2,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-202ENST00000431873 RTEL1-TNFRSF6BF6WH68 1400 aa12.86□□□□□ -0.35
ALK-202ENST00000431873 ZCCHC11Q5TAX3 1644 aaKnown RBP12.85□□□□□ -0.35
ALK-202ENST00000431873 PLIN1O60240 522 aa12.85□□□□□ -0.35
ALK-202ENST00000431873 CRBNQ96SW2 442 aa12.85□□□□□ -0.35
ALK-202ENST00000431873 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
ALK-202ENST00000431873 CLASP1Q7Z460 1538 aa12.84□□□□□ -0.35
ALK-202ENST00000431873 RNF17Q9BXT8 1623 aaKnown RBP12.83□□□□□ -0.36
ALK-202ENST00000431873 PPM1GO15355 546 aaPredicted RBP12.83□□□□□ -0.36
ALK-202ENST00000431873 DDRGK1Q96HY6 314 aa12.83□□□□□ -0.36
ALK-202ENST00000431873 ADAMTS8Q9UP79 889 aa12.82□□□□□ -0.36
ALK-202ENST00000431873 TRAPPC8Q9Y2L5 1435 aa12.82□□□□□ -0.36
ALK-202ENST00000431873 WDR7Q9Y4E6 1490 aa12.82□□□□□ -0.36
ALK-202ENST00000431873 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
ALK-202ENST00000431873 NEFMP07197 916 aa12.81□□□□□ -0.36
ALK-202ENST00000431873 TRPM2O94759 1503 aa12.8□□□□□ -0.36
ALK-202ENST00000431873 PTPRTO14522 1441 aa12.8□□□□□ -0.36
ALK-202ENST00000431873 SPAG9O60271 1321 aaKnown RBP12.8□□□□□ -0.36
ALK-202ENST00000431873 ZNF521Q96K83 1311 aa12.79□□□□□ -0.36
ALK-202ENST00000431873 PPP2R1AP30153 589 aa12.79□□□□□ -0.36
ALK-202ENST00000431873 DUSP27Q5VZP5 1158 aa12.79□□□□□ -0.36
ALK-202ENST00000431873 CENPQQ7L2Z9 268 aaPredicted RBP12.79□□□□□ -0.36
ALK-202ENST00000431873 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
ALK-202ENST00000431873 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
ALK-202ENST00000431873 CDCA8Q53HL2 280 aa12.79□□□□□ -0.36
ALK-202ENST00000431873 LAS1LQ9Y4W2 734 aaKnown RBP12.79□□□□□ -0.36
ALK-202ENST00000431873 ZFYVE16Q7Z3T8 1539 aa12.78□□□□□ -0.36
ALK-202ENST00000431873 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
ALK-202ENST00000431873 MADDQ8WXG6 1647 aa12.78□□□□□ -0.36
ALK-202ENST00000431873 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
ALK-202ENST00000431873 C20orf194Q5TEA3 1177 aa12.78□□□□□ -0.36
ALK-202ENST00000431873 DEPDC5O75140 1603 aa12.78□□□□□ -0.36
ALK-202ENST00000431873 NEURL4Q96JN8 1562 aa12.77□□□□□ -0.37
ALK-202ENST00000431873 GOLGA2Q08379 1002 aa12.77□□□□□ -0.37
ALK-202ENST00000431873 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.77□□□□□ -0.37
ALK-202ENST00000431873 IQGAP1P46940 1657 aa12.76□□□□□ -0.37
ALK-202ENST00000431873 NPC1L1Q9UHC9 1359 aa12.76□□□□□ -0.37
ALK-202ENST00000431873 PIK3C2GO75747 1445 aa12.76□□□□□ -0.37
ALK-202ENST00000431873 SYNMO15061 1565 aa12.76□□□□□ -0.37
ALK-202ENST00000431873 CEP152O94986 1710 aa12.76□□□□□ -0.37
ALK-202ENST00000431873 EIF5BO60841 1220 aaKnown RBP12.76□□□□□ -0.37
ALK-202ENST00000431873 SCAF11Q99590 1463 aaKnown RBP12.75□□□□□ -0.37
ALK-202ENST00000431873 SPHKAPQ2M3C7 1700 aa12.75□□□□□ -0.37
ALK-202ENST00000431873 SKAP1Q86WV1 359 aa12.75□□□□□ -0.37
ALK-202ENST00000431873 TET3O43151 1660 aa12.75□□□□□ -0.37
ALK-202ENST00000431873 VWDEQ8N2E2 1590 aa12.75□□□□□ -0.37
ALK-202ENST00000431873 KANK1Q14678 1352 aa12.75□□□□□ -0.37
ALK-202ENST00000431873 ASXL1Q8IXJ9 1541 aa12.74□□□□□ -0.37
ALK-202ENST00000431873 TRMT2AQ8IZ69 625 aaKnown RBP12.73□□□□□ -0.37
ALK-202ENST00000431873 AFAP1Q8N556 730 aa12.73□□□□□ -0.37
ALK-202ENST00000431873 SLFN5Q08AF3 891 aa12.73□□□□□ -0.37
ALK-202ENST00000431873 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
ALK-202ENST00000431873 INO80Q9ULG1 1556 aaPredicted RBP12.73□□□□□ -0.37
ALK-202ENST00000431873 ABCA9Q8IUA7 1624 aa12.73□□□□□ -0.37
ALK-202ENST00000431873 KIAA1210Q9ULL0 1709 aa12.72□□□□□ -0.37
ALK-202ENST00000431873 CLTCL1P53675 1640 aa12.72□□□□□ -0.37
ALK-202ENST00000431873 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
ALK-202ENST00000431873 ATP7AQ04656 1500 aa12.72□□□□□ -0.37
ALK-202ENST00000431873 FANCAO15360 1455 aa12.71□□□□□ -0.37
ALK-202ENST00000431873 C8orf34Q49A92 452 aa12.7□□□□□ -0.38
ALK-202ENST00000431873 NGEFQ8N5V2 710 aa12.7□□□□□ -0.38
ALK-202ENST00000431873 PLCB2Q00722 1185 aa12.69□□□□□ -0.38
ALK-202ENST00000431873 NKTRP30414 1462 aaKnown RBP12.68□□□□□ -0.38
ALK-202ENST00000431873 MYOM2P54296 1465 aa12.68□□□□□ -0.38
ALK-202ENST00000431873 MYOM1P52179 1685 aa12.68□□□□□ -0.38
ALK-202ENST00000431873 NFKBIBQ15653 356 aa12.68□□□□□ -0.38
ALK-202ENST00000431873 ADGRL1O94910 1474 aa12.67□□□□□ -0.38
ALK-202ENST00000431873 E9PSI1 815 aa12.66□□□□□ -0.38
ALK-202ENST00000431873 GSE1Q14687 1217 aa12.66□□□□□ -0.38
ALK-202ENST00000431873 IL27Q8NEV9 243 aa12.66□□□□□ -0.38
ALK-202ENST00000431873 APAF1O14727 1248 aa12.65□□□□□ -0.38
ALK-202ENST00000431873 KIF3BO15066 747 aa12.65□□□□□ -0.38
ALK-202ENST00000431873 KDM5AP29375 1690 aaKnown RBP12.65□□□□□ -0.38
ALK-202ENST00000431873 MROH1Q8NDA8 1641 aa12.65□□□□□ -0.38
ALK-202ENST00000431873 MAP3K4Q9Y6R4 1608 aa12.65□□□□□ -0.38
ALK-202ENST00000431873 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
ALK-202ENST00000431873 CCDC146Q8IYE0 955 aa12.64□□□□□ -0.39
ALK-202ENST00000431873 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
ALK-202ENST00000431873 SLC4A3P48751 1232 aa12.64□□□□□ -0.39
ALK-202ENST00000431873 PDE3AQ14432 1141 aa12.64□□□□□ -0.39
ALK-202ENST00000431873 EFCAB6Q5THR3 1501 aa12.64□□□□□ -0.39
ALK-202ENST00000431873 NINLQ9Y2I6 1382 aa12.63□□□□□ -0.39
ALK-202ENST00000431873 CGNL1Q0VF96 1302 aa12.63□□□□□ -0.39
ALK-202ENST00000431873 BCAR3O75815 825 aa12.62□□□□□ -0.39
ALK-202ENST00000431873 RGS3P49796 1198 aa12.62□□□□□ -0.39
ALK-202ENST00000431873 NRXN1Q9ULB1 1477 aa12.62□□□□□ -0.39
ALK-202ENST00000431873 SBNO2Q9Y2G9 1366 aa12.62□□□□□ -0.39
ALK-202ENST00000431873 ERVK-7P63135 1459 aa12.61□□□□□ -0.39
ALK-202ENST00000431873 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
ALK-202ENST00000431873 ASXL2Q76L83 1435 aa12.61□□□□□ -0.39
ALK-202ENST00000431873 KIF1BO60333 1816 aa12.61□□□□□ -0.39
ALK-202ENST00000431873 ZNF518AQ6AHZ1 1483 aa12.61□□□□□ -0.39
ALK-202ENST00000431873 ABCA6Q8N139 1617 aa12.6□□□□□ -0.39
ALK-202ENST00000431873 IFT172Q9UG01 1749 aa12.6□□□□□ -0.39
ALK-202ENST00000431873 POLR3AO14802 1390 aaPredicted RBP12.6□□□□□ -0.39
ALK-202ENST00000431873 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
ALK-202ENST00000431873 CARD14Q9BXL6 1004 aa12.6□□□□□ -0.39
ALK-202ENST00000431873 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
ALK-202ENST00000431873 MAPK8IP3Q9UPT6 1336 aa12.59□□□□□ -0.39
ALK-202ENST00000431873 CFAP70Q5T0N1 1121 aa12.59□□□□□ -0.39
ALK-202ENST00000431873 KIDINS220Q9ULH0 1771 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms