RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 ANKLE1Q8NAG6 615 aa6.38□□□□□ -1.39
CDC40-204ENST00000431461 FAM198AQ9UFP1 575 aa6.38□□□□□ -1.39
CDC40-204ENST00000431461 CRIPAKQ8N1N5 446 aa6.37□□□□□ -1.39
CDC40-204ENST00000431461 C11orf95C9JLR9 678 aaPredicted RBP6.36□□□□□ -1.39
CDC40-204ENST00000431461 RNF223E7ERA6 249 aa6.36□□□□□ -1.39
CDC40-204ENST00000431461 LMOD2Q6P5Q4 547 aa6.36□□□□□ -1.39
CDC40-204ENST00000431461 COPS2P61201 443 aa6.35□□□□□ -1.39
CDC40-204ENST00000431461 NUDT18Q6ZVK8 323 aa6.35□□□□□ -1.39
CDC40-204ENST00000431461 GDF9O60383 454 aa6.34□□□□□ -1.39
CDC40-204ENST00000431461 EMID1Q96A84 441 aaPredicted RBP6.34□□□□□ -1.39
CDC40-204ENST00000431461 C3orf80F5H4A9 247 aa6.32□□□□□ -1.4
CDC40-204ENST00000431461 ZNF697Q5TEC3 545 aa6.32□□□□□ -1.4
CDC40-204ENST00000431461 TTC13Q8NBP0 860 aa6.32□□□□□ -1.4
CDC40-204ENST00000431461 GMPR2Q9P2T1 348 aaKnown RBP6.32□□□□□ -1.4
CDC40-204ENST00000431461 PCDHB3Q9Y5E6 796 aa6.32□□□□□ -1.4
CDC40-204ENST00000431461 SWT1Q5T5J6 900 aaKnown RBP6.31□□□□□ -1.4
CDC40-204ENST00000431461 TNFRSF10AO00220 468 aa6.3□□□□□ -1.4
CDC40-204ENST00000431461 TERTO14746 1132 aaKnown RBP6.3□□□□□ -1.4
CDC40-204ENST00000431461 ARIH1Q9Y4X5 557 aaPredicted RBP6.3□□□□□ -1.4
CDC40-204ENST00000431461 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
CDC40-204ENST00000431461 LIAT1Q6ZQX7 453 aa6.29□□□□□ -1.4
CDC40-204ENST00000431461 ZSCAN1Q8NBB4 408 aa6.29□□□□□ -1.4
CDC40-204ENST00000431461 AVPP01185 164 aa6.28□□□□□ -1.4
CDC40-204ENST00000431461 CTC1Q2NKJ3 1217 aa6.28□□□□□ -1.4
CDC40-204ENST00000431461 GRXCR2A6NFK2 248 aa6.27□□□□□ -1.41
CDC40-204ENST00000431461 AXIN1O15169 862 aa6.27□□□□□ -1.41
CDC40-204ENST00000431461 PRIM1P49642 420 aaKnown RBP6.27□□□□□ -1.41
CDC40-204ENST00000431461 BLOC1S3Q6QNY0 202 aa6.27□□□□□ -1.41
CDC40-204ENST00000431461 EYA1Q99502 592 aa6.26□□□□□ -1.41
CDC40-204ENST00000431461 CDHR5Q9HBB8 845 aa6.26□□□□□ -1.41
CDC40-204ENST00000431461 DACH1Q9UI36 760 aa6.26□□□□□ -1.41
CDC40-204ENST00000431461 ACTN4O43707 911 aaKnown RBP6.25□□□□□ -1.41
CDC40-204ENST00000431461 ADH1BP00325 375 aa6.25□□□□□ -1.41
CDC40-204ENST00000431461 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
CDC40-204ENST00000431461 KMT5BQ4FZB7 885 aa6.25□□□□□ -1.41
CDC40-204ENST00000431461 S1PR4O95977 384 aa6.24□□□□□ -1.41
CDC40-204ENST00000431461 OSBPP22059 807 aa6.24□□□□□ -1.41
CDC40-204ENST00000431461 BBXQ8WY36 941 aaPredicted RBP6.24□□□□□ -1.41
CDC40-204ENST00000431461 RPIAP49247 311 aa6.23□□□□□ -1.41
CDC40-204ENST00000431461 PADI6Q6TGC4 694 aa6.23□□□□□ -1.41
CDC40-204ENST00000431461 PPEF1O14829 653 aaPredicted RBP6.22□□□□□ -1.41
CDC40-204ENST00000431461 NR1I2O75469 434 aa6.22□□□□□ -1.41
CDC40-204ENST00000431461 SLC16A10Q8TF71 515 aa6.22□□□□□ -1.41
CDC40-204ENST00000431461 SLC6A16Q9GZN6 736 aa6.22□□□□□ -1.41
CDC40-204ENST00000431461 NPDC1Q9NQX5 325 aaPredicted RBP6.22□□□□□ -1.41
CDC40-204ENST00000431461 PKD2L1Q9P0L9 805 aa6.22□□□□□ -1.41
CDC40-204ENST00000431461 DNAJB2P25686 324 aa6.21□□□□□ -1.42
CDC40-204ENST00000431461 TOR4AQ9NXH8 423 aa6.21□□□□□ -1.42
CDC40-204ENST00000431461 TLL1O43897 1013 aa6.2□□□□□ -1.42
CDC40-204ENST00000431461 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
CDC40-204ENST00000431461 E2F4Q16254 413 aa6.2□□□□□ -1.42
CDC40-204ENST00000431461 CD2BP2O95400 341 aaKnown RBP6.19□□□□□ -1.42
CDC40-204ENST00000431461 KCTD17Q8N5Z5 321 aa6.19□□□□□ -1.42
CDC40-204ENST00000431461 SENP2Q9HC62 589 aa6.19□□□□□ -1.42
CDC40-204ENST00000431461 CYP4X1Q8N118 509 aa6.18□□□□□ -1.42
CDC40-204ENST00000431461 SPRYD3Q8NCJ5 442 aa6.18□□□□□ -1.42
CDC40-204ENST00000431461 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
CDC40-204ENST00000431461 TMEM134Q9H6X4 195 aa6.18□□□□□ -1.42
CDC40-204ENST00000431461 KCNMA1Q12791 1236 aa6.17□□□□□ -1.42
CDC40-204ENST00000431461 FOXC1Q12948 553 aa6.17□□□□□ -1.42
CDC40-204ENST00000431461 PLA2G2CQ5R387 149 aa6.17□□□□□ -1.42
CDC40-204ENST00000431461 XP32Q5T750 250 aa6.17□□□□□ -1.42
CDC40-204ENST00000431461 RBM46Q8TBY0 533 aaKnown RBP6.17□□□□□ -1.42
CDC40-204ENST00000431461 TRIM47Q96LD4 638 aa6.17□□□□□ -1.42
CDC40-204ENST00000431461 GMPRP36959 345 aa6.16□□□□□ -1.42
CDC40-204ENST00000431461 CFHP08603 1231 aa6.15□□□□□ -1.42
CDC40-204ENST00000431461 SNRPBP14678 240 aaKnown RBP6.15□□□□□ -1.42
CDC40-204ENST00000431461 IRF7Q92985 503 aa6.15□□□□□ -1.42
CDC40-204ENST00000431461 KIFC2Q96AC6 838 aa6.15□□□□□ -1.42
CDC40-204ENST00000431461 RSPH4AQ5TD94 716 aa6.14□□□□□ -1.43
CDC40-204ENST00000431461 SCUBE3Q8IX30 993 aa6.14□□□□□ -1.43
CDC40-204ENST00000431461 ATP13A2Q9NQ11 1180 aa6.14□□□□□ -1.43
CDC40-204ENST00000431461 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.14□□□□□ -1.43
CDC40-204ENST00000431461 NPAS3Q8IXF0 933 aa6.13□□□□□ -1.43
CDC40-204ENST00000431461 SPSB2Q99619 263 aa6.13□□□□□ -1.43
CDC40-204ENST00000431461 WDR70Q9NW82 654 aa6.12□□□□□ -1.43
CDC40-204ENST00000431461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.1□□□□□ -1.43
CDC40-204ENST00000431461 TTC24A2A3L6 582 aaPredicted RBP6.1□□□□□ -1.43
CDC40-204ENST00000431461 RCCD1A6NED2 376 aa6.1□□□□□ -1.43
CDC40-204ENST00000431461 SLC10A3P09131 477 aa6.1□□□□□ -1.43
CDC40-204ENST00000431461 TMEM151AQ8N4L1 468 aa6.1□□□□□ -1.43
CDC40-204ENST00000431461 NXF1Q9UBU9 619 aaKnown RBP6.1□□□□□ -1.43
CDC40-204ENST00000431461 ADGRG1Q9Y653 693 aa6.1□□□□□ -1.43
CDC40-204ENST00000431461 SNIP1Q8TAD8 396 aaKnown RBP6.09□□□□□ -1.43
CDC40-204ENST00000431461 WNT7AO00755 349 aa6.08□□□□□ -1.44
CDC40-204ENST00000431461 ZBTB24O43167 697 aaPredicted RBP6.08□□□□□ -1.44
CDC40-204ENST00000431461 PTGDRQ13258 359 aa6.08□□□□□ -1.44
CDC40-204ENST00000431461 FAM161AQ3B820 660 aa6.08□□□□□ -1.44
CDC40-204ENST00000431461 SALL2Q9Y467 1007 aaPredicted RBP6.08□□□□□ -1.44
CDC40-204ENST00000431461 GSK3AP49840 483 aa6.07□□□□□ -1.44
CDC40-204ENST00000431461 FCF1Q9Y324 198 aaKnown RBP6.07□□□□□ -1.44
CDC40-204ENST00000431461 SMPD1P17405 629 aa6.06□□□□□ -1.44
CDC40-204ENST00000431461 PAXIP1Q6ZW49 1069 aaPredicted RBP6.06□□□□□ -1.44
CDC40-204ENST00000431461 CFAP44Q96MT7 982 aa6.06□□□□□ -1.44
CDC40-204ENST00000431461 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
CDC40-204ENST00000431461 RNF225M0QZC1 329 aaPredicted RBP6.05□□□□□ -1.44
CDC40-204ENST00000431461 GDF11O95390 407 aa6.05□□□□□ -1.44
CDC40-204ENST00000431461 OATP04181 439 aa6.05□□□□□ -1.44
CDC40-204ENST00000431461 THAP11Q96EK4 314 aa6.05□□□□□ -1.44
CDC40-204ENST00000431461 FMNL1O95466 1100 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms