RNA–Protein interactions for RNA: ENST00000428797.7

GABRA1-203, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-203ENST00000428797 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
GABRA1-203ENST00000428797 TEX14Q8IWB6 1497 aa11.92□□□□□ -0.5
GABRA1-203ENST00000428797 DDX19BQ9UMR2 479 aa11.92□□□□□ -0.5
GABRA1-203ENST00000428797 MFAP1P55081 439 aaKnown RBP11.91□□□□□ -0.5
GABRA1-203ENST00000428797 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
GABRA1-203ENST00000428797 DHX29Q7Z478 1369 aaKnown RBP11.91□□□□□ -0.5
GABRA1-203ENST00000428797 LMOD3Q0VAK6 560 aa11.91□□□□□ -0.5
GABRA1-203ENST00000428797 STK26Q9P289 416 aa11.91□□□□□ -0.5
GABRA1-203ENST00000428797 RRP7AQ9Y3A4 280 aaKnown RBP11.91□□□□□ -0.5
GABRA1-203ENST00000428797 UHRF1BP1Q6BDS2 1440 aa11.91□□□□□ -0.5
GABRA1-203ENST00000428797 KIAA0556O60303 1618 aa11.91□□□□□ -0.5
GABRA1-203ENST00000428797 NAP1L5Q96NT1 182 aaPredicted RBP11.91□□□□□ -0.5
GABRA1-203ENST00000428797 SHANK2Q9UPX8 1470 aa11.91□□□□□ -0.5
GABRA1-203ENST00000428797 DDX11L8A8MPP1 907 aa11.9□□□□□ -0.5
GABRA1-203ENST00000428797 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
GABRA1-203ENST00000428797 SLFN5Q08AF3 891 aa11.9□□□□□ -0.5
GABRA1-203ENST00000428797 ADGRL2O95490 1459 aa11.9□□□□□ -0.51
GABRA1-203ENST00000428797 PZPP20742 1482 aa11.9□□□□□ -0.51
GABRA1-203ENST00000428797 SPRYD3Q8NCJ5 442 aa11.89□□□□□ -0.51
GABRA1-203ENST00000428797 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
GABRA1-203ENST00000428797 RNF123Q5XPI4 1314 aa11.89□□□□□ -0.51
GABRA1-203ENST00000428797 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
GABRA1-203ENST00000428797 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
GABRA1-203ENST00000428797 NUP160Q12769 1436 aa11.89□□□□□ -0.51
GABRA1-203ENST00000428797 CT47B1P0C2W7 299 aaPredicted RBP11.88□□□□□ -0.51
GABRA1-203ENST00000428797 CFAP70Q5T0N1 1121 aa11.87□□□□□ -0.51
GABRA1-203ENST00000428797 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
GABRA1-203ENST00000428797 SPATA31E1Q6ZUB1 1445 aa11.87□□□□□ -0.51
GABRA1-203ENST00000428797 MCCP23508 829 aa11.87□□□□□ -0.51
GABRA1-203ENST00000428797 CHMP5Q9NZZ3 219 aa11.87□□□□□ -0.51
GABRA1-203ENST00000428797 INSRP06213 1382 aa11.86□□□□□ -0.51
GABRA1-203ENST00000428797 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
GABRA1-203ENST00000428797 TCP11L2Q8N4U5 519 aa11.86□□□□□ -0.51
GABRA1-203ENST00000428797 AFAP1Q8N556 730 aa11.86□□□□□ -0.51
GABRA1-203ENST00000428797 BCL2L13Q9BXK5 485 aa11.86□□□□□ -0.51
GABRA1-203ENST00000428797 RSPH6AQ9H0K4 717 aa11.86□□□□□ -0.51
GABRA1-203ENST00000428797 LRPPRCP42704 1394 aaKnown RBP11.86□□□□□ -0.51
GABRA1-203ENST00000428797 SKOR2Q2VWA4 1001 aaPredicted RBP11.86□□□□□ -0.51
GABRA1-203ENST00000428797 PANK1Q8TE04 598 aa11.86□□□□□ -0.51
GABRA1-203ENST00000428797 PRAG1Q86YV5 1406 aa11.85□□□□□ -0.51
GABRA1-203ENST00000428797 MAGI3Q5TCQ9 1506 aa11.85□□□□□ -0.51
GABRA1-203ENST00000428797 ATP10BO94823 1461 aa11.84□□□□□ -0.51
GABRA1-203ENST00000428797 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
GABRA1-203ENST00000428797 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.51
GABRA1-203ENST00000428797 PTMAP06454 111 aaKnown RBP11.83□□□□□ -0.52
GABRA1-203ENST00000428797 MTHFSP49914 203 aa11.83□□□□□ -0.52
GABRA1-203ENST00000428797 SCAF11Q99590 1463 aaKnown RBP11.83□□□□□ -0.52
GABRA1-203ENST00000428797 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
GABRA1-203ENST00000428797 HMMRO75330 724 aa11.83□□□□□ -0.52
GABRA1-203ENST00000428797 BCAR3O75815 825 aa11.83□□□□□ -0.52
GABRA1-203ENST00000428797 DUSP27Q5VZP5 1158 aa11.83□□□□□ -0.52
GABRA1-203ENST00000428797 DISP1Q96F81 1524 aa11.82□□□□□ -0.52
GABRA1-203ENST00000428797 RPGRIP1LQ68CZ1 1315 aa11.82□□□□□ -0.52
GABRA1-203ENST00000428797 EIF2AK4Q9P2K8 1649 aaKnown RBP11.82□□□□□ -0.52
GABRA1-203ENST00000428797 MSNP26038 577 aaKnown RBP11.82□□□□□ -0.52
GABRA1-203ENST00000428797 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
GABRA1-203ENST00000428797 DISP3Q9P2K9 1392 aa11.81□□□□□ -0.52
GABRA1-203ENST00000428797 RTF1Q92541 710 aaKnown RBP11.81□□□□□ -0.52
GABRA1-203ENST00000428797 C22orf23Q9BZE7 217 aa11.81□□□□□ -0.52
GABRA1-203ENST00000428797 FAM135AQ9P2D6 1515 aa11.81□□□□□ -0.52
GABRA1-203ENST00000428797 CHMP4AQ9BY43 222 aa11.81□□□□□ -0.52
GABRA1-203ENST00000428797 RIPK4P57078 832 aa11.81□□□□□ -0.52
GABRA1-203ENST00000428797 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
GABRA1-203ENST00000428797 API5Q9BZZ5 524 aaKnown RBP11.8□□□□□ -0.52
GABRA1-203ENST00000428797 PDZRN3Q9UPQ7 1066 aa11.8□□□□□ -0.52
GABRA1-203ENST00000428797 WWC1Q8IX03 1113 aa11.8□□□□□ -0.52
GABRA1-203ENST00000428797 ANKRD45Q5TZF3 282 aa11.79□□□□□ -0.52
GABRA1-203ENST00000428797 DUOX2Q9NRD8 1548 aa11.79□□□□□ -0.52
GABRA1-203ENST00000428797 PER1O15534 1290 aaPredicted RBP11.79□□□□□ -0.52
GABRA1-203ENST00000428797 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
GABRA1-203ENST00000428797 ST18O60284 1047 aa11.78□□□□□ -0.52
GABRA1-203ENST00000428797 FRAT2O75474 233 aaPredicted RBP11.78□□□□□ -0.52
GABRA1-203ENST00000428797 C20orf194Q5TEA3 1177 aa11.78□□□□□ -0.52
GABRA1-203ENST00000428797 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
GABRA1-203ENST00000428797 TESK2Q96S53 571 aa11.78□□□□□ -0.52
GABRA1-203ENST00000428797 GNAI1P63096 354 aa11.77□□□□□ -0.52
GABRA1-203ENST00000428797 SYAP1Q96A49 352 aaPredicted RBP11.77□□□□□ -0.53
GABRA1-203ENST00000428797 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
GABRA1-203ENST00000428797 SLC12A5Q9H2X9 1139 aa11.77□□□□□ -0.53
GABRA1-203ENST00000428797 COL17A1Q9UMD9 1497 aaPredicted RBP11.76□□□□□ -0.53
GABRA1-203ENST00000428797 MVPQ14764 893 aaKnown RBP11.76□□□□□ -0.53
GABRA1-203ENST00000428797 ASXL1Q8IXJ9 1541 aa11.76□□□□□ -0.53
GABRA1-203ENST00000428797 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
GABRA1-203ENST00000428797 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
GABRA1-203ENST00000428797 STK31Q9BXU1 1019 aa11.75□□□□□ -0.53
GABRA1-203ENST00000428797 ISY1Q9ULR0 285 aaKnown RBP11.75□□□□□ -0.53
GABRA1-203ENST00000428797 GPRASP1Q5JY77 1395 aa11.75□□□□□ -0.53
GABRA1-203ENST00000428797 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
GABRA1-203ENST00000428797 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.75□□□□□ -0.53
GABRA1-203ENST00000428797 TMEM132EQ6IEE7 984 aa11.75□□□□□ -0.53
GABRA1-203ENST00000428797 MRE11P49959 708 aa11.74□□□□□ -0.53
GABRA1-203ENST00000428797 DNTTIP2Q5QJE6 756 aaKnown RBP11.74□□□□□ -0.53
GABRA1-203ENST00000428797 COG3Q96JB2 828 aa11.74□□□□□ -0.53
GABRA1-203ENST00000428797 PIK3C2GO75747 1445 aa11.74□□□□□ -0.53
GABRA1-203ENST00000428797 KDM6BO15054 1643 aa11.74□□□□□ -0.53
GABRA1-203ENST00000428797 NSD3Q9BZ95 1437 aa11.74□□□□□ -0.53
GABRA1-203ENST00000428797 EXOSC9Q06265 439 aaKnown RBP11.74□□□□□ -0.53
GABRA1-203ENST00000428797 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
GABRA1-203ENST00000428797 NPC1L1Q9UHC9 1359 aa11.73□□□□□ -0.53
GABRA1-203ENST00000428797 RARSP54136 660 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms